RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 C13orf42A0A1B0GVH6 325 aa3.47□□□□□ -1.85
NUP54-206ENST00000508465 SMIM31A0A1B0GVY4 71 aa3.47□□□□□ -1.85
NUP54-206ENST00000508465 ZNF320A2RRD8 509 aa3.47□□□□□ -1.85
NUP54-206ENST00000508465 A6NJ64 397 aa3.47□□□□□ -1.85
NUP54-206ENST00000508465 E7EUB6 86 aa3.47□□□□□ -1.85
NUP54-206ENST00000508465 DIRAS3O95661 229 aa3.47□□□□□ -1.85
NUP54-206ENST00000508465 PPYP01298 95 aa3.47□□□□□ -1.85
NUP54-206ENST00000508465 APOA1P02647 267 aa3.47□□□□□ -1.85
NUP54-206ENST00000508465 REG1AP05451 166 aa3.47□□□□□ -1.85
NUP54-206ENST00000508465 SAA1P0DJI8 122 aaPredicted RBP3.47□□□□□ -1.85
NUP54-206ENST00000508465 GNRHRP30968 328 aa3.47□□□□□ -1.85
NUP54-206ENST00000508465 HRH1P35367 487 aa3.47□□□□□ -1.85
NUP54-206ENST00000508465 CBX5P45973 191 aa3.47□□□□□ -1.85
NUP54-206ENST00000508465 ALDH3B2P48448 385 aa3.47□□□□□ -1.85
NUP54-206ENST00000508465 UBE2KP61086 200 aa3.47□□□□□ -1.85
NUP54-206ENST00000508465 HERV-K104P61576 105 aa3.47□□□□□ -1.85
NUP54-206ENST00000508465 VMA21Q3ZAQ7 101 aa3.47□□□□□ -1.85
NUP54-206ENST00000508465 PHLDA2Q53GA4 152 aa3.47□□□□□ -1.85
NUP54-206ENST00000508465 TMEM268Q5VZI3 342 aa3.47□□□□□ -1.85
NUP54-206ENST00000508465 CST9LP1Q5W188 147 aa3.47□□□□□ -1.85
NUP54-206ENST00000508465 DHRS11Q6UWP2 260 aa3.47□□□□□ -1.85
NUP54-206ENST00000508465 ZNF818PQ6ZRF7 136 aa3.47□□□□□ -1.85
NUP54-206ENST00000508465 KCTD9Q7L273 389 aa3.47□□□□□ -1.85
NUP54-206ENST00000508465 GPR141Q7Z602 305 aa3.47□□□□□ -1.85
NUP54-206ENST00000508465 TMEM17Q86X19 198 aa3.47□□□□□ -1.85
NUP54-206ENST00000508465 CLVS1Q8IUQ0 354 aaPredicted RBP3.47□□□□□ -1.85
NUP54-206ENST00000508465 SPAG16Q8N0X2 631 aa3.47□□□□□ -1.85
NUP54-206ENST00000508465 TEX45Q8NA69 505 aa3.47□□□□□ -1.85
NUP54-206ENST00000508465 OR5M8Q8NGP6 311 aa3.47□□□□□ -1.85
NUP54-206ENST00000508465 OR5H2Q8NGV7 314 aa3.47□□□□□ -1.85
NUP54-206ENST00000508465 OR51H1Q8NH63 302 aa3.47□□□□□ -1.85
NUP54-206ENST00000508465 OR52I2Q8NH67 350 aa3.47□□□□□ -1.85
NUP54-206ENST00000508465 GIMAP1Q8WWP7 306 aa3.47□□□□□ -1.85
NUP54-206ENST00000508465 PHB2Q99623 299 aa3.47□□□□□ -1.85
NUP54-206ENST00000508465 HSD17B10Q99714 261 aaKnown RBP3.47□□□□□ -1.85
NUP54-206ENST00000508465 ZNF2Q9BSG1 426 aaPredicted RBP3.47□□□□□ -1.85
NUP54-206ENST00000508465 MRPS26Q9BYN8 205 aaKnown RBP3.47□□□□□ -1.85
NUP54-206ENST00000508465 COA4Q9NYJ1 87 aa3.47□□□□□ -1.85
NUP54-206ENST00000508465 KLK11Q9UBX7 282 aa3.47□□□□□ -1.85
NUP54-206ENST00000508465 PRELID3BQ9Y3B1 194 aa3.47□□□□□ -1.85
NUP54-206ENST00000508465 SELENOKQ9Y6D0 94 aa3.47□□□□□ -1.85
NUP54-206ENST00000508465 S4R3C0 116 aa3.47□□□□□ -1.85
NUP54-206ENST00000508465 A0A1B0GW64 132 aa3.46□□□□□ -1.86
NUP54-206ENST00000508465 OVOL1O14753 267 aa3.46□□□□□ -1.86
NUP54-206ENST00000508465 RGS5O15539 181 aa3.46□□□□□ -1.86
NUP54-206ENST00000508465 PGLYRP1O75594 196 aaPredicted RBP3.46□□□□□ -1.86
NUP54-206ENST00000508465 SLC22A5O76082 557 aa3.46□□□□□ -1.86
NUP54-206ENST00000508465 OR2A4O95047 310 aa3.46□□□□□ -1.86
NUP54-206ENST00000508465 S1PR2O95136 353 aa3.46□□□□□ -1.86
NUP54-206ENST00000508465 TRBV12-3P01733 135 aa3.46□□□□□ -1.86
NUP54-206ENST00000508465 IGHV3-23P01764 117 aa3.46□□□□□ -1.86
NUP54-206ENST00000508465 HSPB1P04792 205 aaKnown RBP3.46□□□□□ -1.86
NUP54-206ENST00000508465 LGALS1P09382 135 aaKnown RBP3.46□□□□□ -1.86
NUP54-206ENST00000508465 AREGP15514 252 aa3.46□□□□□ -1.86
NUP54-206ENST00000508465 ZNF182P17025 639 aaPredicted RBP3.46□□□□□ -1.86
NUP54-206ENST00000508465 CD40LGP29965 261 aa3.46□□□□□ -1.86
NUP54-206ENST00000508465 SLC6A1P30531 599 aa3.46□□□□□ -1.86
NUP54-206ENST00000508465 LPAR6P43657 344 aa3.46□□□□□ -1.86
NUP54-206ENST00000508465 CRIP2P52943 208 aaPredicted RBP3.46□□□□□ -1.86
NUP54-206ENST00000508465 TSPAN5P62079 268 aa3.46□□□□□ -1.86
NUP54-206ENST00000508465 RHOGP84095 191 aa3.46□□□□□ -1.86
NUP54-206ENST00000508465 RUNX1Q01196 453 aa3.46□□□□□ -1.86
NUP54-206ENST00000508465 ZNF616Q08AN1 781 aa3.46□□□□□ -1.86
NUP54-206ENST00000508465 LCE1FQ5T754 118 aa3.46□□□□□ -1.86
NUP54-206ENST00000508465 TBC1D26Q86UD7 250 aa3.46□□□□□ -1.86
NUP54-206ENST00000508465 HAPLN4Q86UW8 402 aa3.46□□□□□ -1.86
NUP54-206ENST00000508465 TMEM217Q8N7C4 229 aa3.46□□□□□ -1.86
NUP54-206ENST00000508465 ADAD2Q8NCV1 583 aaKnown RBP3.46□□□□□ -1.86
NUP54-206ENST00000508465 OR6F1Q8NGZ6 308 aa3.46□□□□□ -1.86
NUP54-206ENST00000508465 OR4S2Q8NH73 311 aa3.46□□□□□ -1.86
NUP54-206ENST00000508465 GPX8Q8TED1 209 aa3.46□□□□□ -1.86
NUP54-206ENST00000508465 SRSF12Q8WXF0 261 aaKnown RBP3.46□□□□□ -1.86
NUP54-206ENST00000508465 TMEM68Q96MH6 324 aa3.46□□□□□ -1.86
NUP54-206ENST00000508465 OR2A7Q96R45 310 aa3.46□□□□□ -1.86
NUP54-206ENST00000508465 MIXL1Q9H2W2 232 aa3.46□□□□□ -1.86
NUP54-206ENST00000508465 HRASLSQ9HDD0 168 aa3.46□□□□□ -1.86
NUP54-206ENST00000508465 NSG2Q9Y328 171 aa3.46□□□□□ -1.86
NUP54-206ENST00000508465 TNCP24821 2201 aa3.46□□□□□ -1.86
NUP54-206ENST00000508465 CXorf65A6NEN9 183 aa3.45□□□□□ -1.86
NUP54-206ENST00000508465 LINC01619G3V211 115 aa3.45□□□□□ -1.86
NUP54-206ENST00000508465 BMPR1BO00238 502 aa3.45□□□□□ -1.86
NUP54-206ENST00000508465 UPK2O00526 184 aa3.45□□□□□ -1.86
NUP54-206ENST00000508465 SAP30O75446 220 aa3.45□□□□□ -1.86
NUP54-206ENST00000508465 OR2J3O76001 311 aa3.45□□□□□ -1.86
NUP54-206ENST00000508465 GABARAPO95166 117 aa3.45□□□□□ -1.86
NUP54-206ENST00000508465 DUS4LO95620 317 aaKnown RBP3.45□□□□□ -1.86
NUP54-206ENST00000508465 HRASP01112 189 aa3.45□□□□□ -1.86
NUP54-206ENST00000508465 KRASP01116 189 aa3.45□□□□□ -1.86
NUP54-206ENST00000508465 HLA-AP01891 365 aaKnown RBP3.45□□□□□ -1.86
NUP54-206ENST00000508465 CD3DP04234 171 aa3.45□□□□□ -1.86
NUP54-206ENST00000508465 RLN1P04808 185 aa3.45□□□□□ -1.86
NUP54-206ENST00000508465 HOXB5P09067 269 aa3.45□□□□□ -1.86
NUP54-206ENST00000508465 OR8U8P0C7N1 319 aa3.45□□□□□ -1.86
NUP54-206ENST00000508465 OR9G9P0C7N8 305 aa3.45□□□□□ -1.86
NUP54-206ENST00000508465 PGAM2P15259 253 aa3.45□□□□□ -1.86
NUP54-206ENST00000508465 HLA-GP17693 338 aa3.45□□□□□ -1.86
NUP54-206ENST00000508465 G6PCP35575 357 aa3.45□□□□□ -1.86
NUP54-206ENST00000508465 RPL27AP46776 148 aaKnown RBP3.45□□□□□ -1.86
NUP54-206ENST00000508465 SYNJ2BPP57105 145 aa3.45□□□□□ -1.86
NUP54-206ENST00000508465 TAS2R46P59540 309 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms