RNA–Protein interactions for RNA: ENST00000507401.2

SCN1A-207, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 3

Gene SCN1A, Length 711 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-207ENST00000507401 EDDM3BP56851 147 aa6.47□□□□□ -1.37
SCN1A-207ENST00000507401 KRTAP10-3P60369 221 aa6.47□□□□□ -1.37
SCN1A-207ENST00000507401 PAFAH1B2P68402 229 aa6.47□□□□□ -1.37
SCN1A-207ENST00000507401 ANKRD55Q3KP44 614 aa6.47□□□□□ -1.37
SCN1A-207ENST00000507401 ASPHD2Q6ICH7 369 aa6.47□□□□□ -1.37
SCN1A-207ENST00000507401 SMIM15Q7Z3B0 74 aa6.47□□□□□ -1.37
SCN1A-207ENST00000507401 CENPVQ7Z7K6 275 aaPredicted RBP6.47□□□□□ -1.37
SCN1A-207ENST00000507401 BATF2Q8N1L9 274 aa6.47□□□□□ -1.37
SCN1A-207ENST00000507401 PRR18Q8N4B5 295 aa6.47□□□□□ -1.37
SCN1A-207ENST00000507401 CCDC71LQ8N9Z2 235 aa6.47□□□□□ -1.37
SCN1A-207ENST00000507401 PIFOQ8TCI5 191 aa6.47□□□□□ -1.37
SCN1A-207ENST00000507401 MRGPRDQ8TDS7 321 aa6.47□□□□□ -1.37
SCN1A-207ENST00000507401 TMEM170AQ8WVE7 144 aa6.47□□□□□ -1.37
SCN1A-207ENST00000507401 FRZBQ92765 325 aa6.47□□□□□ -1.37
SCN1A-207ENST00000507401 CORO2AQ92828 525 aa6.47□□□□□ -1.37
SCN1A-207ENST00000507401 ANAPC16Q96DE5 110 aa6.47□□□□□ -1.37
SCN1A-207ENST00000507401 OR10C1Q96KK4 312 aa6.47□□□□□ -1.37
SCN1A-207ENST00000507401 OR5B12Q96R08 314 aa6.47□□□□□ -1.37
SCN1A-207ENST00000507401 RTBDNQ9BSG5 229 aaPredicted RBP6.47□□□□□ -1.37
SCN1A-207ENST00000507401 CABLES2Q9BTV7 478 aa6.47□□□□□ -1.37
SCN1A-207ENST00000507401 PRO1933Q9H354 126 aa6.47□□□□□ -1.37
SCN1A-207ENST00000507401 Q9N2K0 584 aa6.47□□□□□ -1.37
SCN1A-207ENST00000507401 GSKIPQ9P0R6 139 aa6.47□□□□□ -1.37
SCN1A-207ENST00000507401 UBE2J1Q9Y385 318 aaPredicted RBP6.47□□□□□ -1.37
SCN1A-207ENST00000507401 LINC00312Q9Y6C7 94 aa6.47□□□□□ -1.37
SCN1A-207ENST00000507401 TRAV9-1A0A075B6T8 112 aa6.46□□□□□ -1.38
SCN1A-207ENST00000507401 ODF3BA8MYP8 253 aa6.46□□□□□ -1.38
SCN1A-207ENST00000507401 PSPNO60542 156 aa6.46□□□□□ -1.38
SCN1A-207ENST00000507401 AMBPP02760 352 aa6.46□□□□□ -1.38
SCN1A-207ENST00000507401 CSN2P05814 226 aa6.46□□□□□ -1.38
SCN1A-207ENST00000507401 OR13C7P0DN81 318 aa6.46□□□□□ -1.38
SCN1A-207ENST00000507401 BCL3P20749 454 aa6.46□□□□□ -1.38
SCN1A-207ENST00000507401 COX7A1P24310 79 aa6.46□□□□□ -1.38
SCN1A-207ENST00000507401 UCP1P25874 307 aa6.46□□□□□ -1.38
SCN1A-207ENST00000507401 CDKN1BP46527 198 aa6.46□□□□□ -1.38
SCN1A-207ENST00000507401 UCP3P55916 312 aa6.46□□□□□ -1.38
SCN1A-207ENST00000507401 RND3P61587 244 aa6.46□□□□□ -1.38
SCN1A-207ENST00000507401 HERPUD1Q15011 391 aa6.46□□□□□ -1.38
SCN1A-207ENST00000507401 KISS1Q15726 138 aa6.46□□□□□ -1.38
SCN1A-207ENST00000507401 TMEM183BQ1AE95 376 aa6.46□□□□□ -1.38
SCN1A-207ENST00000507401 MPV17LQ2QL34 196 aa6.46□□□□□ -1.38
SCN1A-207ENST00000507401 MINOS1Q5TGZ0 78 aa6.46□□□□□ -1.38
SCN1A-207ENST00000507401 KCNIP4Q6PIL6 250 aa6.46□□□□□ -1.38
SCN1A-207ENST00000507401 RTN4RL2Q86UN3 420 aa6.46□□□□□ -1.38
SCN1A-207ENST00000507401 LGI3Q8N145 548 aa6.46□□□□□ -1.38
SCN1A-207ENST00000507401 FAM89BQ8N5H3 189 aa6.46□□□□□ -1.38
SCN1A-207ENST00000507401 Q8NFD4 153 aa6.46□□□□□ -1.38
SCN1A-207ENST00000507401 OR5T1Q8NG75 326 aa6.46□□□□□ -1.38
SCN1A-207ENST00000507401 OR4S1Q8NGB4 309 aa6.46□□□□□ -1.38
SCN1A-207ENST00000507401 OR51A4Q8NGJ6 313 aa6.46□□□□□ -1.38
SCN1A-207ENST00000507401 OR4C13Q8NGP0 309 aa6.46□□□□□ -1.38
SCN1A-207ENST00000507401 OR13C9Q8NGT0 318 aa6.46□□□□□ -1.38
SCN1A-207ENST00000507401 OR10AC1Q8NH08 325 aa6.46□□□□□ -1.38
SCN1A-207ENST00000507401 SVIPQ8NHG7 77 aa6.46□□□□□ -1.38
SCN1A-207ENST00000507401 FAM213BQ8TBF2 198 aa6.46□□□□□ -1.38
SCN1A-207ENST00000507401 NEK7Q8TDX7 302 aa6.46□□□□□ -1.38
SCN1A-207ENST00000507401 DTD1Q8TEA8 209 aa6.46□□□□□ -1.38
SCN1A-207ENST00000507401 ABHD5Q8WTS1 349 aa6.46□□□□□ -1.38
SCN1A-207ENST00000507401 ORAOV1Q8WV07 137 aa6.46□□□□□ -1.38
SCN1A-207ENST00000507401 MIEN1Q9BRT3 115 aa6.46□□□□□ -1.38
SCN1A-207ENST00000507401 ZNF2Q9BSG1 426 aaPredicted RBP6.46□□□□□ -1.38
SCN1A-207ENST00000507401 C20orf24Q9BUV8 137 aa6.46□□□□□ -1.38
SCN1A-207ENST00000507401 SNHG12Q9BXW3 62 aa6.46□□□□□ -1.38
SCN1A-207ENST00000507401 TMEM133Q9H2Q1 129 aa6.46□□□□□ -1.38
SCN1A-207ENST00000507401 TAS2R4Q9NYW5 299 aa6.46□□□□□ -1.38
SCN1A-207ENST00000507401 CHTOPQ9Y3Y2 248 aaKnown RBP6.46□□□□□ -1.38
SCN1A-207ENST00000507401 MINOS1-NBL1R4GNA1 71 aa6.46□□□□□ -1.38
SCN1A-207ENST00000507401 TRAV39A0A0B4J263 110 aa6.45□□□□□ -1.38
SCN1A-207ENST00000507401 IGKV1-12A0A0C4DH73 117 aa6.45□□□□□ -1.38
SCN1A-207ENST00000507401 XKRY2A2RUG3 117 aa6.45□□□□□ -1.38
SCN1A-207ENST00000507401 TMEM250H0YL14 139 aa6.45□□□□□ -1.38
SCN1A-207ENST00000507401 K7EP13 123 aa6.45□□□□□ -1.38
SCN1A-207ENST00000507401 SOX15O60248 233 aa6.45□□□□□ -1.38
SCN1A-207ENST00000507401 OR2H2O95918 312 aa6.45□□□□□ -1.38
SCN1A-207ENST00000507401 IGKV1D-12P01611 117 aa6.45□□□□□ -1.38
SCN1A-207ENST00000507401 CXCL1P09341 107 aa6.45□□□□□ -1.38
SCN1A-207ENST00000507401 DTYMKP23919 212 aa6.45□□□□□ -1.38
SCN1A-207ENST00000507401 RPL19P84098 196 aaKnown RBP6.45□□□□□ -1.38
SCN1A-207ENST00000507401 AADACL3Q5VUY0 350 aa6.45□□□□□ -1.38
SCN1A-207ENST00000507401 ASCL4Q6XD76 172 aa6.45□□□□□ -1.38
SCN1A-207ENST00000507401 TCF23Q7RTU1 214 aa6.45□□□□□ -1.38
SCN1A-207ENST00000507401 LHFPL4Q7Z7J7 247 aa6.45□□□□□ -1.38
SCN1A-207ENST00000507401 FAM219AQ8IW50 185 aa6.45□□□□□ -1.38
SCN1A-207ENST00000507401 OR2G3Q8NGZ4 309 aa6.45□□□□□ -1.38
SCN1A-207ENST00000507401 OR2T6Q8NHC8 308 aa6.45□□□□□ -1.38
SCN1A-207ENST00000507401 PINX1Q96BK5 328 aaKnown RBP6.45□□□□□ -1.38
SCN1A-207ENST00000507401 TMEM59Q9BXS4 323 aa6.45□□□□□ -1.38
SCN1A-207ENST00000507401 NPFFR1Q9GZQ6 430 aa6.45□□□□□ -1.38
SCN1A-207ENST00000507401 NAT8Q9UHE5 227 aa6.45□□□□□ -1.38
SCN1A-207ENST00000507401 AK3Q9UIJ7 227 aa6.45□□□□□ -1.38
SCN1A-207ENST00000507401 GAB2Q9UQC2 676 aa6.45□□□□□ -1.38
SCN1A-207ENST00000507401 TRGV10A0A0A0MS01 117 aa6.44□□□□□ -1.38
SCN1A-207ENST00000507401 LOC102723971A0A1B0GUV8 181 aa6.44□□□□□ -1.38
SCN1A-207ENST00000507401 A6NDX4 124 aa6.44□□□□□ -1.38
SCN1A-207ENST00000507401 ZNF705GA8MUZ8 300 aaPredicted RBP6.44□□□□□ -1.38
SCN1A-207ENST00000507401 FAM90A22PA8MWA6 464 aa6.44□□□□□ -1.38
SCN1A-207ENST00000507401 DEGS1O15121 323 aa6.44□□□□□ -1.38
SCN1A-207ENST00000507401 SERPINA2P20848 420 aa6.44□□□□□ -1.38
SCN1A-207ENST00000507401 HTR1DP28221 377 aa6.44□□□□□ -1.38
SCN1A-207ENST00000507401 ZNF93P35789 620 aaPredicted RBP6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms