RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 DBX1A6NMT0 343 aa8.56□□□□□ -1.04
HMGCS1-204ENST00000507293 SPRY2O43597 315 aa8.56□□□□□ -1.04
HMGCS1-204ENST00000507293 HRH1P35367 487 aa8.56□□□□□ -1.04
HMGCS1-204ENST00000507293 LSM3P62310 102 aaKnown RBP8.56□□□□□ -1.04
HMGCS1-204ENST00000507293 EWSR1Q01844 656 aaKnown RBP eCLIP8.56□□□□□ -1.04
HMGCS1-204ENST00000507293 PHLDA2Q53GA4 152 aa8.56□□□□□ -1.04
HMGCS1-204ENST00000507293 LAMTOR1Q6IAA8 161 aa8.56□□□□□ -1.04
HMGCS1-204ENST00000507293 Q6ZWC4 215 aa8.56□□□□□ -1.04
HMGCS1-204ENST00000507293 LYG2Q86SG7 212 aa8.56□□□□□ -1.04
HMGCS1-204ENST00000507293 WFDC3Q8IUB2 231 aa8.56□□□□□ -1.04
HMGCS1-204ENST00000507293 CMTM1Q8IZ96 169 aa8.56□□□□□ -1.04
HMGCS1-204ENST00000507293 CADM3Q8N126 398 aa8.56□□□□□ -1.04
HMGCS1-204ENST00000507293 OR6F1Q8NGZ6 308 aa8.56□□□□□ -1.04
HMGCS1-204ENST00000507293 TMEM56Q96MV1 263 aa8.56□□□□□ -1.04
HMGCS1-204ENST00000507293 ATP6V0BQ99437 205 aa8.56□□□□□ -1.04
HMGCS1-204ENST00000507293 TP53TG1Q9Y2A0 90 aa8.56□□□□□ -1.04
HMGCS1-204ENST00000507293 NUPR2A6NF83 97 aa8.55□□□□□ -1.04
HMGCS1-204ENST00000507293 OR4C46A6NHA9 309 aa8.55□□□□□ -1.04
HMGCS1-204ENST00000507293 C15orf61A6NNL5 157 aa8.55□□□□□ -1.04
HMGCS1-204ENST00000507293 K7EMT4 169 aa8.55□□□□□ -1.04
HMGCS1-204ENST00000507293 CTSDP07339 412 aaPredicted RBP8.55□□□□□ -1.04
HMGCS1-204ENST00000507293 RPL35AP18077 110 aaKnown RBP8.55□□□□□ -1.04
HMGCS1-204ENST00000507293 HLA-DMAP28067 261 aa8.55□□□□□ -1.04
HMGCS1-204ENST00000507293 PRSS3P35030 304 aa8.55□□□□□ -1.04
HMGCS1-204ENST00000507293 BMI1P35226 326 aa8.55□□□□□ -1.04
HMGCS1-204ENST00000507293 TNFRSF9Q07011 255 aa8.55□□□□□ -1.04
HMGCS1-204ENST00000507293 LYSMD2Q8IV50 215 aa8.55□□□□□ -1.04
HMGCS1-204ENST00000507293 OR5B3Q8NH48 314 aa8.55□□□□□ -1.04
HMGCS1-204ENST00000507293 YIPF6Q96EC8 236 aa8.55□□□□□ -1.04
HMGCS1-204ENST00000507293 MISP3Q96FF7 219 aa8.55□□□□□ -1.04
HMGCS1-204ENST00000507293 ZNF414Q96IQ9 312 aa8.55□□□□□ -1.04
HMGCS1-204ENST00000507293 TMEM14BQ9NUH8 114 aa8.55□□□□□ -1.04
HMGCS1-204ENST00000507293 KIR2DL5BA0A0G2JN68 375 aa8.54□□□□□ -1.04
HMGCS1-204ENST00000507293 KIR2DL5BA0A0G2JPC4 375 aa8.54□□□□□ -1.04
HMGCS1-204ENST00000507293 C15orf62A8K5M9 175 aa8.54□□□□□ -1.04
HMGCS1-204ENST00000507293 UBE2CO00762 179 aa8.54□□□□□ -1.04
HMGCS1-204ENST00000507293 LY6G6CO95867 125 aa8.54□□□□□ -1.04
HMGCS1-204ENST00000507293 EIF4EP06730 217 aaKnown RBP8.54□□□□□ -1.04
HMGCS1-204ENST00000507293 TBC1D26Q86UD7 250 aa8.54□□□□□ -1.04
HMGCS1-204ENST00000507293 KIR2DL5AQ8N109 375 aa8.54□□□□□ -1.04
HMGCS1-204ENST00000507293 STPG3Q8N7X2 389 aa8.54□□□□□ -1.04
HMGCS1-204ENST00000507293 OR1P1Q8NH06 330 aa8.54□□□□□ -1.04
HMGCS1-204ENST00000507293 KIR2DL5BQ8NHK3 375 aa8.54□□□□□ -1.04
HMGCS1-204ENST00000507293 GPX8Q8TED1 209 aa8.54□□□□□ -1.04
HMGCS1-204ENST00000507293 SLC25A46Q96AG3 418 aa8.54□□□□□ -1.04
HMGCS1-204ENST00000507293 RNF183Q96D59 192 aa8.54□□□□□ -1.04
HMGCS1-204ENST00000507293 TSC22D3Q99576 134 aa8.54□□□□□ -1.04
HMGCS1-204ENST00000507293 FKBP11Q9NYL4 201 aa8.54□□□□□ -1.04
HMGCS1-204ENST00000507293 SMPXQ9UHP9 88 aa8.54□□□□□ -1.04
HMGCS1-204ENST00000507293 IGHV3-49A0A0A0MS15 119 aa8.53□□□□□ -1.04
HMGCS1-204ENST00000507293 IGHV7-4-1A0A0J9YVY3 117 aa8.53□□□□□ -1.04
HMGCS1-204ENST00000507293 CHEK1O14757 476 aa8.53□□□□□ -1.04
HMGCS1-204ENST00000507293 NUPL2O15504 423 aaKnown RBP8.53□□□□□ -1.04
HMGCS1-204ENST00000507293 CTSGP08311 255 aa8.53□□□□□ -1.04
HMGCS1-204ENST00000507293 S100GP29377 79 aa8.53□□□□□ -1.04
HMGCS1-204ENST00000507293 TSPAN5P62079 268 aa8.53□□□□□ -1.04
HMGCS1-204ENST00000507293 RELQ04864 619 aaPredicted RBP8.53□□□□□ -1.04
HMGCS1-204ENST00000507293 LPCAT3Q6P1A2 487 aa8.53□□□□□ -1.04
HMGCS1-204ENST00000507293 CEMP1Q6PRD7 247 aaPredicted RBP8.53□□□□□ -1.04
HMGCS1-204ENST00000507293 H2BFWTQ7Z2G1 175 aa8.53□□□□□ -1.04
HMGCS1-204ENST00000507293 SNX29P2Q8IUI4 249 aa8.53□□□□□ -1.04
HMGCS1-204ENST00000507293 APRG1Q8IVJ8 170 aa8.53□□□□□ -1.04
HMGCS1-204ENST00000507293 GALNT14Q96FL9 552 aa8.53□□□□□ -1.04
HMGCS1-204ENST00000507293 RNF2Q99496 336 aa8.53□□□□□ -1.04
HMGCS1-204ENST00000507293 RHPN1-AS1Q9BWJ2 59 aa8.53□□□□□ -1.04
HMGCS1-204ENST00000507293 MAP6D1Q9H9H5 199 aa8.53□□□□□ -1.04
HMGCS1-204ENST00000507293 FAM212BQ9NTI7 297 aaPredicted RBP8.53□□□□□ -1.04
HMGCS1-204ENST00000507293 IGKV3-7A0A075B6H7 116 aa8.52□□□□□ -1.05
HMGCS1-204ENST00000507293 I3L2K1 104 aa8.52□□□□□ -1.05
HMGCS1-204ENST00000507293 YIF1AO95070 293 aa8.52□□□□□ -1.05
HMGCS1-204ENST00000507293 MT-CO2P00403 227 aa8.52□□□□□ -1.05
HMGCS1-204ENST00000507293 IGKV1-39P01597 117 aa8.52□□□□□ -1.05
HMGCS1-204ENST00000507293 IGHV3-48P01763 117 aa8.52□□□□□ -1.05
HMGCS1-204ENST00000507293 IGKV1D-39P04432 117 aa8.52□□□□□ -1.05
HMGCS1-204ENST00000507293 FCGR2BP31994 310 aaPredicted RBP8.52□□□□□ -1.05
HMGCS1-204ENST00000507293 RCVRNP35243 200 aa8.52□□□□□ -1.05
HMGCS1-204ENST00000507293 TFPI2P48307 235 aa8.52□□□□□ -1.05
HMGCS1-204ENST00000507293 MFAP4P55083 255 aa8.52□□□□□ -1.05
HMGCS1-204ENST00000507293 PRCDQ00LT1 54 aa8.52□□□□□ -1.05
HMGCS1-204ENST00000507293 ZNF124Q15973 351 aa8.52□□□□□ -1.05
HMGCS1-204ENST00000507293 TMEM116Q8NCL8 245 aa8.52□□□□□ -1.05
HMGCS1-204ENST00000507293 OR4A16Q8NH70 328 aa8.52□□□□□ -1.05
HMGCS1-204ENST00000507293 MRGPRFQ96AM1 343 aa8.52□□□□□ -1.05
HMGCS1-204ENST00000507293 PINX1Q96BK5 328 aaKnown RBP8.52□□□□□ -1.05
HMGCS1-204ENST00000507293 SEC22AQ96IW7 307 aa8.52□□□□□ -1.05
HMGCS1-204ENST00000507293 COMMD3Q9UBI1 195 aa8.52□□□□□ -1.05
HMGCS1-204ENST00000507293 ATF4P18848 351 aaPredicted RBP8.51□□□□□ -1.05
HMGCS1-204ENST00000507293 ZNF114Q8NC26 417 aa8.51□□□□□ -1.05
HMGCS1-204ENST00000507293 OR10C1Q96KK4 312 aa8.51□□□□□ -1.05
HMGCS1-204ENST00000507293 TXN2Q99757 166 aa8.51□□□□□ -1.05
HMGCS1-204ENST00000507293 C6orf62Q9GZU0 229 aaPredicted RBP8.51□□□□□ -1.05
HMGCS1-204ENST00000507293 NXF2Q9GZY0 626 aaKnown RBP8.51□□□□□ -1.05
HMGCS1-204ENST00000507293 SCPEP1Q9HB40 452 aa8.51□□□□□ -1.05
HMGCS1-204ENST00000507293 KLK5Q9Y337 293 aaPredicted RBP8.51□□□□□ -1.05
HMGCS1-204ENST00000507293 IGHV3OR16-13A0A075B7E8 117 aa8.5□□□□□ -1.05
HMGCS1-204ENST00000507293 TRAV14DV4A0A0A6YYC5 116 aa8.5□□□□□ -1.05
HMGCS1-204ENST00000507293 IGHV3-74A0A0B4J1X5 117 aa8.5□□□□□ -1.05
HMGCS1-204ENST00000507293 SMIM31A0A1B0GVY4 71 aa8.5□□□□□ -1.05
HMGCS1-204ENST00000507293 M0QYG6 137 aa8.5□□□□□ -1.05
HMGCS1-204ENST00000507293 GNG7O60262 68 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 230.7 ms