RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 CITED4Q96RK1 184 aa12.54□□□□□ -0.4
PDLIM7-215ENST00000506161 FAM110AQ9BQ89 295 aa12.54□□□□□ -0.4
PDLIM7-215ENST00000506161 ZNF436Q9C0F3 470 aaPredicted RBP12.54□□□□□ -0.4
PDLIM7-215ENST00000506161 ZMAT4Q9H898 229 aa12.54□□□□□ -0.4
PDLIM7-215ENST00000506161 DNAH1Q9P2D7 4330 aa12.54□□□□□ -0.4
PDLIM7-215ENST00000506161 TGOLN2O43493 480 aa12.53□□□□□ -0.4
PDLIM7-215ENST00000506161 SCAF4O95104 1147 aaKnown RBP12.53□□□□□ -0.4
PDLIM7-215ENST00000506161 IGHV3-48P01763 117 aa12.53□□□□□ -0.4
PDLIM7-215ENST00000506161 C8orf88P0DMB2 117 aa12.53□□□□□ -0.4
PDLIM7-215ENST00000506161 SLC38A6Q8IZM9 456 aa12.53□□□□□ -0.4
PDLIM7-215ENST00000506161 LYSTQ99698 3801 aa12.53□□□□□ -0.4
PDLIM7-215ENST00000506161 CD74P04233 296 aa12.52□□□□□ -0.41
PDLIM7-215ENST00000506161 RND3P61587 244 aa12.52□□□□□ -0.41
PDLIM7-215ENST00000506161 SP6Q3SY56 376 aa12.52□□□□□ -0.41
PDLIM7-215ENST00000506161 RNASE10Q5GAN6 216 aaKnown RBP12.52□□□□□ -0.41
PDLIM7-215ENST00000506161 THOC7Q6I9Y2 204 aaKnown RBP12.52□□□□□ -0.41
PDLIM7-215ENST00000506161 PLET1Q6UQ28 207 aa12.52□□□□□ -0.41
PDLIM7-215ENST00000506161 GPR141Q7Z602 305 aa12.52□□□□□ -0.41
PDLIM7-215ENST00000506161 CLVS1Q8IUQ0 354 aaPredicted RBP12.52□□□□□ -0.41
PDLIM7-215ENST00000506161 VN1R17PQ8TDU5 208 aa12.52□□□□□ -0.41
PDLIM7-215ENST00000506161 TMEM190Q8WZ59 177 aa12.52□□□□□ -0.41
PDLIM7-215ENST00000506161 HIPK2Q9H2X6 1198 aa12.52□□□□□ -0.41
PDLIM7-215ENST00000506161 SRD5A3Q9H8P0 318 aa12.52□□□□□ -0.41
PDLIM7-215ENST00000506161 FAM212BQ9NTI7 297 aaPredicted RBP12.52□□□□□ -0.41
PDLIM7-215ENST00000506161 ZNF207O43670 478 aaKnown RBP12.51□□□□□ -0.41
PDLIM7-215ENST00000506161 SNAPC5O75971 98 aa12.51□□□□□ -0.41
PDLIM7-215ENST00000506161 PGAM2P15259 253 aa12.51□□□□□ -0.41
PDLIM7-215ENST00000506161 PIGPP57054 158 aa12.51□□□□□ -0.41
PDLIM7-215ENST00000506161 FAM106AQ4KMX7 169 aa12.51□□□□□ -0.41
PDLIM7-215ENST00000506161 ZNF57Q68EA5 555 aaPredicted RBP12.51□□□□□ -0.41
PDLIM7-215ENST00000506161 ZFAND6Q6FIF0 208 aa12.51□□□□□ -0.41
PDLIM7-215ENST00000506161 LPCAT3Q6P1A2 487 aa12.51□□□□□ -0.41
PDLIM7-215ENST00000506161 OR2C3Q8N628 320 aa12.51□□□□□ -0.41
PDLIM7-215ENST00000506161 OR5B3Q8NH48 314 aa12.51□□□□□ -0.41
PDLIM7-215ENST00000506161 DYNC2LI1Q8TCX1 351 aa12.51□□□□□ -0.41
PDLIM7-215ENST00000506161 AP3S1Q92572 193 aa12.51□□□□□ -0.41
PDLIM7-215ENST00000506161 TUBA4BQ9H853 241 aa12.51□□□□□ -0.41
PDLIM7-215ENST00000506161 TECRQ9NZ01 308 aaKnown RBP12.51□□□□□ -0.41
PDLIM7-215ENST00000506161 PRNDQ9UKY0 176 aa12.51□□□□□ -0.41
PDLIM7-215ENST00000506161 CEPT1Q9Y6K0 416 aa12.51□□□□□ -0.41
PDLIM7-215ENST00000506161 A0A0B4J293 547 aa12.5□□□□□ -0.41
PDLIM7-215ENST00000506161 OR11H12B2RN74 326 aa12.5□□□□□ -0.41
PDLIM7-215ENST00000506161 I3L2K1 104 aa12.5□□□□□ -0.41
PDLIM7-215ENST00000506161 H2BFWTQ7Z2G1 175 aa12.5□□□□□ -0.41
PDLIM7-215ENST00000506161 TMEM229BQ8NBD8 167 aa12.5□□□□□ -0.41
PDLIM7-215ENST00000506161 OR13C8Q8NGS7 320 aa12.5□□□□□ -0.41
PDLIM7-215ENST00000506161 LHFPL5Q8TAF8 219 aa12.5□□□□□ -0.41
PDLIM7-215ENST00000506161 MARCH1Q8TCQ1 289 aa12.5□□□□□ -0.41
PDLIM7-215ENST00000506161 SPATA25Q9BR10 227 aa12.5□□□□□ -0.41
PDLIM7-215ENST00000506161 C21orf62Q9NYP8 219 aa12.5□□□□□ -0.41
PDLIM7-215ENST00000506161 RGS5O15539 181 aa12.49□□□□□ -0.41
PDLIM7-215ENST00000506161 TPPPO94811 219 aa12.49□□□□□ -0.41
PDLIM7-215ENST00000506161 CTSGP08311 255 aa12.49□□□□□ -0.41
PDLIM7-215ENST00000506161 PRCDQ00LT1 54 aa12.49□□□□□ -0.41
PDLIM7-215ENST00000506161 Q6ZRM9 215 aa12.49□□□□□ -0.41
PDLIM7-215ENST00000506161 HSD17B13Q7Z5P4 300 aaPredicted RBP12.49□□□□□ -0.41
PDLIM7-215ENST00000506161 ARRDC1Q8N5I2 433 aa12.49□□□□□ -0.41
PDLIM7-215ENST00000506161 UBAC2Q8NBM4 344 aa12.49□□□□□ -0.41
PDLIM7-215ENST00000506161 SLC2A8Q9NY64 477 aa12.49□□□□□ -0.41
PDLIM7-215ENST00000506161 THYN1Q9P016 225 aa12.49□□□□□ -0.41
PDLIM7-215ENST00000506161 GABARAPH6UMI1 98 aa12.48□□□□□ -0.41
PDLIM7-215ENST00000506161 RAB3DO95716 219 aa12.48□□□□□ -0.41
PDLIM7-215ENST00000506161 SCGB2B2Q4G0G5 96 aa12.48□□□□□ -0.41
PDLIM7-215ENST00000506161 STEAP1BQ6NZ63 245 aa12.48□□□□□ -0.41
PDLIM7-215ENST00000506161 OR1P1Q8NH06 330 aa12.48□□□□□ -0.41
PDLIM7-215ENST00000506161 MISP3Q96FF7 219 aa12.48□□□□□ -0.41
PDLIM7-215ENST00000506161 RTBDNQ9BSG5 229 aaPredicted RBP12.48□□□□□ -0.41
PDLIM7-215ENST00000506161 MRPL36Q9P0J6 103 aaKnown RBP12.48□□□□□ -0.41
PDLIM7-215ENST00000506161 C3orf85A0A1B0GTC6 90 aa12.47□□□□□ -0.41
PDLIM7-215ENST00000506161 ST8SIA3O43173 380 aa12.47□□□□□ -0.41
PDLIM7-215ENST00000506161 MT-CO2P00403 227 aa12.47□□□□□ -0.41
PDLIM7-215ENST00000506161 IFNA6P05013 189 aa12.47□□□□□ -0.41
PDLIM7-215ENST00000506161 HSPE1P61604 102 aaKnown RBP12.47□□□□□ -0.41
PDLIM7-215ENST00000506161 Q56UQ5 140 aa12.47□□□□□ -0.41
PDLIM7-215ENST00000506161 ZNF114Q8NC26 417 aa12.47□□□□□ -0.41
PDLIM7-215ENST00000506161 OR4C16Q8NGL9 310 aa12.47□□□□□ -0.41
PDLIM7-215ENST00000506161 OR4A16Q8NH70 328 aa12.47□□□□□ -0.41
PDLIM7-215ENST00000506161 TERB2Q8NHR7 220 aa12.47□□□□□ -0.41
PDLIM7-215ENST00000506161 SMIM4Q8WVI0 70 aa12.47□□□□□ -0.41
PDLIM7-215ENST00000506161 BSCL2Q96G97 398 aaPredicted RBP12.47□□□□□ -0.41
PDLIM7-215ENST00000506161 ZNF486Q96H40 463 aaPredicted RBP12.47□□□□□ -0.41
PDLIM7-215ENST00000506161 TMEM56Q96MV1 263 aa12.47□□□□□ -0.41
PDLIM7-215ENST00000506161 TSC22D3Q99576 134 aa12.47□□□□□ -0.41
PDLIM7-215ENST00000506161 SLIRPQ9GZT3 109 aaKnown RBP12.47□□□□□ -0.41
PDLIM7-215ENST00000506161 FKBP11Q9NYL4 201 aa12.47□□□□□ -0.41
PDLIM7-215ENST00000506161 MRPL27Q9P0M9 148 aaKnown RBP12.47□□□□□ -0.41
PDLIM7-215ENST00000506161 UBQLN2Q9UHD9 624 aa12.47□□□□□ -0.41
PDLIM7-215ENST00000506161 IGHV3-49A0A0A0MS15 119 aa12.46□□□□□ -0.41
PDLIM7-215ENST00000506161 TBPP20226 339 aa12.46□□□□□ -0.41
PDLIM7-215ENST00000506161 UCP1P25874 307 aa12.46□□□□□ -0.41
PDLIM7-215ENST00000506161 ELLP55199 621 aaPredicted RBP12.46□□□□□ -0.41
PDLIM7-215ENST00000506161 TAS2R19P59542 299 aa12.46□□□□□ -0.41
PDLIM7-215ENST00000506161 OR52B4Q8NGK2 314 aa12.46□□□□□ -0.41
PDLIM7-215ENST00000506161 C20orf24Q9BUV8 137 aa12.46□□□□□ -0.41
PDLIM7-215ENST00000506161 C5orf66Q9H5L9 145 aa12.46□□□□□ -0.41
PDLIM7-215ENST00000506161 PRR13Q9NZ81 148 aa12.46□□□□□ -0.41
PDLIM7-215ENST00000506161 UFC1Q9Y3C8 167 aa12.46□□□□□ -0.41
PDLIM7-215ENST00000506161 H3BMQ9 156 aa12.45□□□□□ -0.42
PDLIM7-215ENST00000506161 NDUFA4O00483 81 aa12.45□□□□□ -0.42
PDLIM7-215ENST00000506161 CTSDP07339 412 aaPredicted RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms