RNA–Protein interactions for RNA: ENST00000506098.5

NUP54-204, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-204ENST00000506098 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.73□□□□□ -1.49
NUP54-204ENST00000506098 TMEM14BQ9NUH8 114 aa5.73□□□□□ -1.49
NUP54-204ENST00000506098 FKBP11Q9NYL4 201 aa5.73□□□□□ -1.49
NUP54-204ENST00000506098 KIAA1456Q9P272 454 aa5.73□□□□□ -1.49
NUP54-204ENST00000506098 MGAT4CQ9UBM8 478 aa5.73□□□□□ -1.49
NUP54-204ENST00000506098 CACFD1Q9UGQ2 172 aa5.73□□□□□ -1.49
NUP54-204ENST00000506098 FOXA2Q9Y261 457 aaPredicted RBP5.73□□□□□ -1.49
NUP54-204ENST00000506098 MOB4Q9Y3A3 225 aa5.73□□□□□ -1.49
NUP54-204ENST00000506098 NF1P21359 2839 aa5.73□□□□□ -1.49
NUP54-204ENST00000506098 TRAV3A0A0B4J244 114 aa5.72□□□□□ -1.49
NUP54-204ENST00000506098 BTBD17A6NE02 478 aa5.72□□□□□ -1.49
NUP54-204ENST00000506098 C5orf52A6NGY3 159 aa5.72□□□□□ -1.49
NUP54-204ENST00000506098 C15orf61A6NNL5 157 aa5.72□□□□□ -1.49
NUP54-204ENST00000506098 FAM90A26D6RGX4 464 aa5.72□□□□□ -1.49
NUP54-204ENST00000506098 CLDN34H7C241 214 aa5.72□□□□□ -1.49
NUP54-204ENST00000506098 CCSO14618 274 aa5.72□□□□□ -1.49
NUP54-204ENST00000506098 GOSR2O14653 212 aa5.72□□□□□ -1.49
NUP54-204ENST00000506098 HOXA3O43365 443 aaPredicted RBP5.72□□□□□ -1.49
NUP54-204ENST00000506098 HLA-DRB1P01911 266 aa5.72□□□□□ -1.49
NUP54-204ENST00000506098 PPBPP02775 128 aa5.72□□□□□ -1.49
NUP54-204ENST00000506098 RLN2P04090 185 aa5.72□□□□□ -1.49
NUP54-204ENST00000506098 AMY1AP04745 511 aa5.72□□□□□ -1.49
NUP54-204ENST00000506098 METTL15P1P0C7V9 234 aa5.72□□□□□ -1.49
NUP54-204ENST00000506098 RAB2AP61019 212 aa5.72□□□□□ -1.49
NUP54-204ENST00000506098 PKIAP61925 76 aa5.72□□□□□ -1.49
NUP54-204ENST00000506098 RPL8P62917 257 aaKnown RBP5.72□□□□□ -1.49
NUP54-204ENST00000506098 SSBP2P81877 361 aaPredicted RBP5.72□□□□□ -1.49
NUP54-204ENST00000506098 ID3Q02535 119 aa5.72□□□□□ -1.49
NUP54-204ENST00000506098 ODF1Q14990 250 aa5.72□□□□□ -1.49
NUP54-204ENST00000506098 PRSS8Q16651 343 aa5.72□□□□□ -1.49
NUP54-204ENST00000506098 IZUMO4Q1ZYL8 232 aa5.72□□□□□ -1.49
NUP54-204ENST00000506098 ZNF674Q2M3X9 581 aa5.72□□□□□ -1.49
NUP54-204ENST00000506098 IAH1Q2TAA2 248 aaPredicted RBP5.72□□□□□ -1.49
NUP54-204ENST00000506098 ZNF562Q6V9R5 426 aa5.72□□□□□ -1.49
NUP54-204ENST00000506098 Q71RC1 249 aaPredicted RBP5.72□□□□□ -1.49
NUP54-204ENST00000506098 MMD2Q8IY49 270 aa5.72□□□□□ -1.49
NUP54-204ENST00000506098 C5orf56Q8N8D9 126 aa5.72□□□□□ -1.49
NUP54-204ENST00000506098 OR52E5Q8NH55 327 aa5.72□□□□□ -1.49
NUP54-204ENST00000506098 FAM210BQ96KR6 192 aa5.72□□□□□ -1.49
NUP54-204ENST00000506098 FYTTD1Q96QD9 318 aaKnown RBP5.72□□□□□ -1.49
NUP54-204ENST00000506098 FBXL15Q9H469 300 aa5.72□□□□□ -1.49
NUP54-204ENST00000506098 ZNF430Q9H8G1 570 aaPredicted RBP5.72□□□□□ -1.49
NUP54-204ENST00000506098 CACNG5Q9UF02 275 aa5.72□□□□□ -1.49
NUP54-204ENST00000506098 VPREB3Q9UKI3 123 aa5.72□□□□□ -1.49
NUP54-204ENST00000506098 PRNDQ9UKY0 176 aa5.72□□□□□ -1.49
NUP54-204ENST00000506098 ZNF257Q9Y2Q1 563 aa5.72□□□□□ -1.49
NUP54-204ENST00000506098 TEP1Q99973 2627 aaKnown RBP5.72□□□□□ -1.49
NUP54-204ENST00000506098 TEX50A0A1B0GTY4 177 aa5.71□□□□□ -1.5
NUP54-204ENST00000506098 C13orf42A0A1B0GVH6 325 aa5.71□□□□□ -1.5
NUP54-204ENST00000506098 NCBP2LA6PVI3 153 aaKnown RBP5.71□□□□□ -1.5
NUP54-204ENST00000506098 TSTD3H0UI37 97 aa5.71□□□□□ -1.5
NUP54-204ENST00000506098 FCN1O00602 326 aa5.71□□□□□ -1.5
NUP54-204ENST00000506098 DLEU1O43261 78 aa5.71□□□□□ -1.5
NUP54-204ENST00000506098 KCNAB3O43448 404 aa5.71□□□□□ -1.5
NUP54-204ENST00000506098 CHST1O43916 411 aa5.71□□□□□ -1.5
NUP54-204ENST00000506098 GGCTO75223 188 aaKnown RBP5.71□□□□□ -1.5
NUP54-204ENST00000506098 SIX6O95475 246 aa5.71□□□□□ -1.5
NUP54-204ENST00000506098 GIPP09681 153 aaPredicted RBP5.71□□□□□ -1.5
NUP54-204ENST00000506098 CRIP2P52943 208 aaPredicted RBP5.71□□□□□ -1.5
NUP54-204ENST00000506098 HILS1P60008 231 aa5.71□□□□□ -1.5
NUP54-204ENST00000506098 RPL15P61313 204 aaKnown RBP5.71□□□□□ -1.5
NUP54-204ENST00000506098 HSPE1P61604 102 aaKnown RBP5.71□□□□□ -1.5
NUP54-204ENST00000506098 PJVKQ0ZLH3 352 aa5.71□□□□□ -1.5
NUP54-204ENST00000506098 LY6EQ16553 131 aa5.71□□□□□ -1.5
NUP54-204ENST00000506098 LAMTOR1Q6IAA8 161 aa5.71□□□□□ -1.5
NUP54-204ENST00000506098 RBMS3Q6XE24 437 aaKnown RBP5.71□□□□□ -1.5
NUP54-204ENST00000506098 TMEM219Q86XT9 240 aa5.71□□□□□ -1.5
NUP54-204ENST00000506098 NUDT10Q8NFP7 164 aa5.71□□□□□ -1.5
NUP54-204ENST00000506098 OR5B3Q8NH48 314 aa5.71□□□□□ -1.5
NUP54-204ENST00000506098 OR4A16Q8NH70 328 aa5.71□□□□□ -1.5
NUP54-204ENST00000506098 ZNF418Q8TF45 676 aaPredicted RBP5.71□□□□□ -1.5
NUP54-204ENST00000506098 NARS2Q96I59 477 aaKnown RBP5.71□□□□□ -1.5
NUP54-204ENST00000506098 NOL4LQ96MY1 436 aaPredicted RBP5.71□□□□□ -1.5
NUP54-204ENST00000506098 RASL11BQ9BPW5 248 aa5.71□□□□□ -1.5
NUP54-204ENST00000506098 GGACTQ9BVM4 153 aa5.71□□□□□ -1.5
NUP54-204ENST00000506098 CHIAQ9BZP6 476 aa5.71□□□□□ -1.5
NUP54-204ENST00000506098 ESM1Q9NQ30 184 aa5.71□□□□□ -1.5
NUP54-204ENST00000506098 TPSG1Q9NRR2 321 aa5.71□□□□□ -1.5
NUP54-204ENST00000506098 HSPB7Q9UBY9 170 aa5.71□□□□□ -1.5
NUP54-204ENST00000506098 IGHV7-81A0A0B4J1V7 117 aa5.7□□□□□ -1.5
NUP54-204ENST00000506098 DNAJC9-AS1A6NH13 148 aa5.7□□□□□ -1.5
NUP54-204ENST00000506098 CGB1A6NKQ9 187 aa5.7□□□□□ -1.5
NUP54-204ENST00000506098 INS-IGF2F8WCM5 200 aa5.7□□□□□ -1.5
NUP54-204ENST00000506098 ST8SIA3O43173 380 aa5.7□□□□□ -1.5
NUP54-204ENST00000506098 CA2P00918 260 aa5.7□□□□□ -1.5
NUP54-204ENST00000506098 IGHG2P01859 326 aa5.7□□□□□ -1.5
NUP54-204ENST00000506098 MBPP02686 304 aaPredicted RBP5.7□□□□□ -1.5
NUP54-204ENST00000506098 CRYGCP07315 174 aa5.7□□□□□ -1.5
NUP54-204ENST00000506098 RNASE1P07998 156 aaKnown RBP5.7□□□□□ -1.5
NUP54-204ENST00000506098 S100A11P31949 105 aa5.7□□□□□ -1.5
NUP54-204ENST00000506098 NKX2-1P43699 371 aaPredicted RBP5.7□□□□□ -1.5
NUP54-204ENST00000506098 COMPP49747 757 aaPredicted RBP5.7□□□□□ -1.5
NUP54-204ENST00000506098 OR2B8PP59922 312 aa5.7□□□□□ -1.5
NUP54-204ENST00000506098 RAP2BP61225 183 aa5.7□□□□□ -1.5
NUP54-204ENST00000506098 BLOC1S1P78537 153 aa5.7□□□□□ -1.5
NUP54-204ENST00000506098 PRCDQ00LT1 54 aa5.7□□□□□ -1.5
NUP54-204ENST00000506098 TNFRSF9Q07011 255 aa5.7□□□□□ -1.5
NUP54-204ENST00000506098 PLGLAQ15195 96 aa5.7□□□□□ -1.5
NUP54-204ENST00000506098 CXorf66Q5JRM2 361 aaPredicted RBP5.7□□□□□ -1.5
NUP54-204ENST00000506098 OR1L8Q8NGR8 309 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 140.9 ms