RNA–Protein interactions for RNA: ENST00000506042.5

SQSTM1-210, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 921 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-210ENST00000506042 TMEM116Q8NCL8 245 aa15.58■□□□□ 0.08
SQSTM1-210ENST00000506042 SCARB1Q8WTV0 552 aa15.58■□□□□ 0.08
SQSTM1-210ENST00000506042 YTHDF1Q9BYJ9 559 aaKnown RBP15.58■□□□□ 0.08
SQSTM1-210ENST00000506042 AUNIPQ9H7T9 357 aa15.58■□□□□ 0.08
SQSTM1-210ENST00000506042 NDUFA4L2Q9NRX3 87 aa15.58■□□□□ 0.08
SQSTM1-210ENST00000506042 EPPK1P58107 5090 aaKnown RBP15.57■□□□□ 0.08
SQSTM1-210ENST00000506042 TRAV3A0A0B4J244 114 aa15.57■□□□□ 0.08
SQSTM1-210ENST00000506042 KRASP01116 189 aa15.57■□□□□ 0.08
SQSTM1-210ENST00000506042 RLN1P04808 185 aa15.57■□□□□ 0.08
SQSTM1-210ENST00000506042 MFAP4P55083 255 aa15.57■□□□□ 0.08
SQSTM1-210ENST00000506042 WT1-ASQ06250 92 aa15.57■□□□□ 0.08
SQSTM1-210ENST00000506042 OR1P1Q8NH06 330 aa15.57■□□□□ 0.08
SQSTM1-210ENST00000506042 C11orf45Q8TAV5 145 aa15.57■□□□□ 0.08
SQSTM1-210ENST00000506042 DGCR14Q96DF8 476 aaKnown RBP15.57■□□□□ 0.08
SQSTM1-210ENST00000506042 TMEM231Q9H6L2 316 aa15.57■□□□□ 0.08
SQSTM1-210ENST00000506042 SMPXQ9UHP9 88 aa15.57■□□□□ 0.08
SQSTM1-210ENST00000506042 ANKRD65E5RJM6 399 aa15.56■□□□□ 0.08
SQSTM1-210ENST00000506042 ZNF773Q6PK81 442 aa15.56■□□□□ 0.08
SQSTM1-210ENST00000506042 SPARTQ8N0X7 666 aa15.56■□□□□ 0.08
SQSTM1-210ENST00000506042 OR5H2Q8NGV7 314 aa15.56■□□□□ 0.08
SQSTM1-210ENST00000506042 OR6F1Q8NGZ6 308 aa15.56■□□□□ 0.08
SQSTM1-210ENST00000506042 RHPN1-AS1Q9BWJ2 59 aa15.56■□□□□ 0.08
SQSTM1-210ENST00000506042 C11orf68Q9H3H3 251 aaKnown RBP15.56■□□□□ 0.08
SQSTM1-210ENST00000506042 TRAV14DV4A0A0A6YYC5 116 aa15.55■□□□□ 0.08
SQSTM1-210ENST00000506042 IGHV7-4-1A0A0J9YVY3 117 aa15.55■□□□□ 0.08
SQSTM1-210ENST00000506042 LOC100506127A0A0U1RQW1 187 aa15.55■□□□□ 0.08
SQSTM1-210ENST00000506042 GNG7O60262 68 aa15.55■□□□□ 0.08
SQSTM1-210ENST00000506042 LPAR6P43657 344 aa15.55■□□□□ 0.08
SQSTM1-210ENST00000506042 MOB3AQ96BX8 217 aa15.55■□□□□ 0.08
SQSTM1-210ENST00000506042 ZNF2Q9BSG1 426 aaPredicted RBP15.55■□□□□ 0.08
SQSTM1-210ENST00000506042 FAM212BQ9NTI7 297 aaPredicted RBP15.55■□□□□ 0.08
SQSTM1-210ENST00000506042 DNASE2O00115 360 aaPredicted RBP15.54■□□□□ 0.08
SQSTM1-210ENST00000506042 GPR31O00270 319 aa15.54■□□□□ 0.08
SQSTM1-210ENST00000506042 GNRHRP30968 328 aa15.54■□□□□ 0.08
SQSTM1-210ENST00000506042 ERHP84090 104 aaKnown RBP15.54■□□□□ 0.08
SQSTM1-210ENST00000506042 TMEM41BQ5BJD5 291 aa15.54■□□□□ 0.08
SQSTM1-210ENST00000506042 DHRS11Q6UWP2 260 aa15.54■□□□□ 0.08
SQSTM1-210ENST00000506042 OR4A16Q8NH70 328 aa15.54■□□□□ 0.08
SQSTM1-210ENST00000506042 C2CD4CQ8TF44 421 aa15.54■□□□□ 0.08
SQSTM1-210ENST00000506042 MISP3Q96FF7 219 aa15.54■□□□□ 0.08
SQSTM1-210ENST00000506042 CHRDL1Q9BU40 450 aa15.54■□□□□ 0.08
SQSTM1-210ENST00000506042 XRCC3O43542 346 aa15.53■□□□□ 0.08
SQSTM1-210ENST00000506042 ZNF207O43670 478 aaKnown RBP15.53■□□□□ 0.08
SQSTM1-210ENST00000506042 PGLYRP1O75594 196 aaPredicted RBP15.53■□□□□ 0.08
SQSTM1-210ENST00000506042 DFFBO76075 338 aa15.53■□□□□ 0.08
SQSTM1-210ENST00000506042 PTHLHP12272 177 aa15.53■□□□□ 0.08
SQSTM1-210ENST00000506042 G6PCP35575 357 aa15.53■□□□□ 0.08
SQSTM1-210ENST00000506042 H2BFWTQ7Z2G1 175 aa15.53■□□□□ 0.08
SQSTM1-210ENST00000506042 APRG1Q8IVJ8 170 aa15.53■□□□□ 0.08
SQSTM1-210ENST00000506042 SLC25A46Q96AG3 418 aa15.53■□□□□ 0.08
SQSTM1-210ENST00000506042 SLC25A38Q96DW6 304 aa15.53■□□□□ 0.08
SQSTM1-210ENST00000506042 FBXL17Q9UF56 701 aa15.53■□□□□ 0.08
SQSTM1-210ENST00000506042 IGHV3-21A0A0B4J1V1 117 aa15.52■□□□□ 0.08
SQSTM1-210ENST00000506042 C11orf94C9JXX5 98 aa15.52■□□□□ 0.08
SQSTM1-210ENST00000506042 CHEK1O14757 476 aa15.52■□□□□ 0.08
SQSTM1-210ENST00000506042 FCER2P06734 321 aa15.52■□□□□ 0.08
SQSTM1-210ENST00000506042 FCGR2BP31994 310 aaPredicted RBP15.52■□□□□ 0.08
SQSTM1-210ENST00000506042 NPBWR1P48145 328 aa15.52■□□□□ 0.08
SQSTM1-210ENST00000506042 TFPI2P48307 235 aa15.52■□□□□ 0.08
SQSTM1-210ENST00000506042 TSPAN5P62079 268 aa15.52■□□□□ 0.08
SQSTM1-210ENST00000506042 TMEM187Q14656 261 aa15.52■□□□□ 0.08
SQSTM1-210ENST00000506042 TMEM69Q5SWH9 247 aa15.52■□□□□ 0.08
SQSTM1-210ENST00000506042 OR5H6Q8NGV6 325 aa15.52■□□□□ 0.08
SQSTM1-210ENST00000506042 OR11H2Q8NH07 326 aa15.52■□□□□ 0.08
SQSTM1-210ENST00000506042 FCAMRQ8WWV6 532 aa15.52■□□□□ 0.08
SQSTM1-210ENST00000506042 NARS2Q96I59 477 aaKnown RBP15.52■□□□□ 0.08
SQSTM1-210ENST00000506042 RNF2Q99496 336 aa15.52■□□□□ 0.08
SQSTM1-210ENST00000506042 IGHV3OR16-8A0A075B7F1 116 aa15.51■□□□□ 0.07
SQSTM1-210ENST00000506042 C15orf61A6NNL5 157 aa15.51■□□□□ 0.07
SQSTM1-210ENST00000506042 K7EIM0 57 aa15.51■□□□□ 0.07
SQSTM1-210ENST00000506042 CTSGP08311 255 aa15.51■□□□□ 0.07
SQSTM1-210ENST00000506042 RPL11P62913 178 aaKnown RBP15.51■□□□□ 0.07
SQSTM1-210ENST00000506042 EWSR1Q01844 656 aaKnown RBP eCLIP15.51■□□□□ 0.07
SQSTM1-210ENST00000506042 UBE2NLQ5JXB2 153 aa15.51■□□□□ 0.07
SQSTM1-210ENST00000506042 OR10C1Q96KK4 312 aa15.51■□□□□ 0.07
SQSTM1-210ENST00000506042 IGKV3-7A0A075B6H7 116 aa15.5■□□□□ 0.07
SQSTM1-210ENST00000506042 A0A1W2PS18 150 aa15.5■□□□□ 0.07
SQSTM1-210ENST00000506042 ATG12O94817 140 aa15.5■□□□□ 0.07
SQSTM1-210ENST00000506042 CA1P00915 261 aaPredicted RBP15.5■□□□□ 0.07
SQSTM1-210ENST00000506042 SNCAP37840 140 aa15.5■□□□□ 0.07
SQSTM1-210ENST00000506042 DUSP18Q8NEJ0 188 aa15.5■□□□□ 0.07
SQSTM1-210ENST00000506042 NXF2Q9GZY0 626 aaKnown RBP15.5■□□□□ 0.07
SQSTM1-210ENST00000506042 TMEM14BQ9NUH8 114 aa15.5■□□□□ 0.07
SQSTM1-210ENST00000506042 NSG2Q9Y328 171 aa15.5■□□□□ 0.07
SQSTM1-210ENST00000506042 TRAV2A0A0B4J234 112 aa15.49■□□□□ 0.07
SQSTM1-210ENST00000506042 MEIS3P1A6NDR6 274 aa15.49■□□□□ 0.07
SQSTM1-210ENST00000506042 CORTO00230 105 aa15.49■□□□□ 0.07
SQSTM1-210ENST00000506042 ST8SIA3O43173 380 aa15.49■□□□□ 0.07
SQSTM1-210ENST00000506042 PRSS3P35030 304 aa15.49■□□□□ 0.07
SQSTM1-210ENST00000506042 EIF2B2P49770 351 aaKnown RBP15.49■□□□□ 0.07
SQSTM1-210ENST00000506042 SUB1P53999 127 aaKnown RBP eCLIP15.49■□□□□ 0.07
SQSTM1-210ENST00000506042 TCF24Q7RTU0 167 aa15.49■□□□□ 0.07
SQSTM1-210ENST00000506042 STHQ8IWL8 128 aa15.49■□□□□ 0.07
SQSTM1-210ENST00000506042 RPP25LQ8N5L8 163 aaKnown RBP15.49■□□□□ 0.07
SQSTM1-210ENST00000506042 ZNF114Q8NC26 417 aa15.49■□□□□ 0.07
SQSTM1-210ENST00000506042 PINX1Q96BK5 328 aaKnown RBP15.49■□□□□ 0.07
SQSTM1-210ENST00000506042 PDCD10Q9BUL8 212 aa15.49■□□□□ 0.07
SQSTM1-210ENST00000506042 SMIM31A0A1B0GVY4 71 aa15.48■□□□□ 0.07
SQSTM1-210ENST00000506042 PMP2P02689 132 aa15.48■□□□□ 0.07
SQSTM1-210ENST00000506042 RFX2P48378 723 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms