RNA–Protein interactions for RNA: ENST00000505077.1

RFC1-210, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-210ENST00000505077 SUB1P53999 127 aaKnown RBP eCLIP8.06□□□□□ -1.12
RFC1-210ENST00000505077 TAS2R30P59541 319 aa8.06□□□□□ -1.12
RFC1-210ENST00000505077 RAP2BP61225 183 aa8.06□□□□□ -1.12
RFC1-210ENST00000505077 WT1-ASQ06250 92 aa8.06□□□□□ -1.12
RFC1-210ENST00000505077 IL15RAQ13261 267 aa8.06□□□□□ -1.12
RFC1-210ENST00000505077 C2orf68Q2NKX9 166 aa8.06□□□□□ -1.12
RFC1-210ENST00000505077 KLK9Q2XQG4 91 aa8.06□□□□□ -1.12
RFC1-210ENST00000505077 TMEM95Q3KNT9 176 aa8.06□□□□□ -1.12
RFC1-210ENST00000505077 CXorf66Q5JRM2 361 aaPredicted RBP8.06□□□□□ -1.12
RFC1-210ENST00000505077 ASPHD1Q5U4P2 390 aa8.06□□□□□ -1.12
RFC1-210ENST00000505077 OR2C3Q8N628 320 aa8.06□□□□□ -1.12
RFC1-210ENST00000505077 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.06□□□□□ -1.12
RFC1-210ENST00000505077 OR1P1Q8NH06 330 aa8.06□□□□□ -1.12
RFC1-210ENST00000505077 DTD1Q8TEA8 209 aa8.06□□□□□ -1.12
RFC1-210ENST00000505077 TMEM158Q8WZ71 300 aa8.06□□□□□ -1.12
RFC1-210ENST00000505077 FAM103A1Q9BTL3 118 aaKnown RBP8.06□□□□□ -1.12
RFC1-210ENST00000505077 RBKSQ9H477 322 aa8.06□□□□□ -1.12
RFC1-210ENST00000505077 SLA2Q9H6Q3 261 aa8.06□□□□□ -1.12
RFC1-210ENST00000505077 HEYLQ9NQ87 328 aaPredicted RBP8.06□□□□□ -1.12
RFC1-210ENST00000505077 KLK9Q9UKQ9 250 aa8.06□□□□□ -1.12
RFC1-210ENST00000505077 RNF114Q9Y508 228 aa8.06□□□□□ -1.12
RFC1-210ENST00000505077 WSB1Q9Y6I7 421 aa8.06□□□□□ -1.12
RFC1-210ENST00000505077 LINC01548A6NM66 108 aa8.05□□□□□ -1.12
RFC1-210ENST00000505077 CORTO00230 105 aa8.05□□□□□ -1.12
RFC1-210ENST00000505077 SCGB1D2O95969 90 aa8.05□□□□□ -1.12
RFC1-210ENST00000505077 IGLV1-40P01703 118 aa8.05□□□□□ -1.12
RFC1-210ENST00000505077 MBPP02686 304 aaPredicted RBP8.05□□□□□ -1.12
RFC1-210ENST00000505077 ELANEP08246 267 aa8.05□□□□□ -1.12
RFC1-210ENST00000505077 MYOD1P15172 320 aa8.05□□□□□ -1.12
RFC1-210ENST00000505077 CTRB1P17538 263 aa8.05□□□□□ -1.12
RFC1-210ENST00000505077 PPIFP30405 207 aaKnown RBP8.05□□□□□ -1.12
RFC1-210ENST00000505077 SNCAP37840 140 aa8.05□□□□□ -1.12
RFC1-210ENST00000505077 PROK1P58294 105 aa8.05□□□□□ -1.12
RFC1-210ENST00000505077 RPP30P78346 268 aaKnown RBP8.05□□□□□ -1.12
RFC1-210ENST00000505077 FGL1Q08830 312 aa8.05□□□□□ -1.12
RFC1-210ENST00000505077 FOXE3Q13461 319 aa8.05□□□□□ -1.12
RFC1-210ENST00000505077 BSXQ3C1V8 233 aa8.05□□□□□ -1.12
RFC1-210ENST00000505077 CTRB2Q6GPI1 263 aa8.05□□□□□ -1.12
RFC1-210ENST00000505077 TEX38Q6PEX7 206 aa8.05□□□□□ -1.12
RFC1-210ENST00000505077 RNF152Q8N8N0 203 aa8.05□□□□□ -1.12
RFC1-210ENST00000505077 SLC24A4Q8NFF2 622 aa8.05□□□□□ -1.12
RFC1-210ENST00000505077 OR10W1Q8NGF6 305 aa8.05□□□□□ -1.12
RFC1-210ENST00000505077 OR4X2Q8NGF9 303 aa8.05□□□□□ -1.12
RFC1-210ENST00000505077 WIPF2Q8TF74 440 aaPredicted RBP8.05□□□□□ -1.12
RFC1-210ENST00000505077 PPP1R1CQ8WVI7 109 aa8.05□□□□□ -1.12
RFC1-210ENST00000505077 NOL4LQ96MY1 436 aaPredicted RBP8.05□□□□□ -1.12
RFC1-210ENST00000505077 THYN1Q9P016 225 aa8.05□□□□□ -1.12
RFC1-210ENST00000505077 RCL1Q9Y2P8 373 aaKnown RBP8.05□□□□□ -1.12
RFC1-210ENST00000505077 F11RQ9Y624 299 aaKnown RBP8.05□□□□□ -1.12
RFC1-210ENST00000505077 U3KQ87 197 aa8.05□□□□□ -1.12
RFC1-210ENST00000505077 FBN1P35555 2871 aaKnown RBP8.04□□□□□ -1.12
RFC1-210ENST00000505077 FAM223BA6NKX1 122 aa8.04□□□□□ -1.12
RFC1-210ENST00000505077 G3V318 75 aa8.04□□□□□ -1.12
RFC1-210ENST00000505077 K7EPK0 472 aa8.04□□□□□ -1.12
RFC1-210ENST00000505077 SSSCA1O60232 199 aa8.04□□□□□ -1.12
RFC1-210ENST00000505077 TSC22D2O75157 780 aa8.04□□□□□ -1.12
RFC1-210ENST00000505077 SIX6O95475 246 aa8.04□□□□□ -1.12
RFC1-210ENST00000505077 GHRHP01286 108 aa8.04□□□□□ -1.12
RFC1-210ENST00000505077 RLN2P04090 185 aa8.04□□□□□ -1.12
RFC1-210ENST00000505077 DEFA4P12838 97 aa8.04□□□□□ -1.12
RFC1-210ENST00000505077 AREGP15514 252 aa8.04□□□□□ -1.12
RFC1-210ENST00000505077 PSMB8P28062 276 aa8.04□□□□□ -1.12
RFC1-210ENST00000505077 KRTAP24-1Q3LI83 254 aa8.04□□□□□ -1.12
RFC1-210ENST00000505077 FAM209BQ5JX69 171 aa8.04□□□□□ -1.12
RFC1-210ENST00000505077 CENPVQ7Z7K6 275 aaPredicted RBP8.04□□□□□ -1.12
RFC1-210ENST00000505077 FAM223AQ8IWN6 122 aa8.04□□□□□ -1.12
RFC1-210ENST00000505077 KLHDC1Q8N7A1 406 aa8.04□□□□□ -1.12
RFC1-210ENST00000505077 SMIM8Q96KF7 97 aa8.04□□□□□ -1.12
RFC1-210ENST00000505077 IGLV11-55A0A075B6I3 123 aa8.03□□□□□ -1.12
RFC1-210ENST00000505077 E5RGE8 158 aa8.03□□□□□ -1.12
RFC1-210ENST00000505077 L7N2F9 121 aa8.03□□□□□ -1.12
RFC1-210ENST00000505077 DEDDO75618 318 aa8.03□□□□□ -1.12
RFC1-210ENST00000505077 NXPH3O95157 252 aa8.03□□□□□ -1.12
RFC1-210ENST00000505077 MPC2O95563 127 aa8.03□□□□□ -1.12
RFC1-210ENST00000505077 APELAP0DMC3 54 aa8.03□□□□□ -1.12
RFC1-210ENST00000505077 MDKP21741 143 aaPredicted RBP8.03□□□□□ -1.12
RFC1-210ENST00000505077 NPY1RP25929 384 aa8.03□□□□□ -1.12
RFC1-210ENST00000505077 BCAP31P51572 246 aa8.03□□□□□ -1.12
RFC1-210ENST00000505077 S100A10P60903 97 aa8.03□□□□□ -1.12
RFC1-210ENST00000505077 POLR2GP62487 172 aaKnown RBP eCLIP8.03□□□□□ -1.12
RFC1-210ENST00000505077 RPL23AP62750 156 aaKnown RBP8.03□□□□□ -1.12
RFC1-210ENST00000505077 VAMP2P63027 116 aa8.03□□□□□ -1.12
RFC1-210ENST00000505077 SRSF2Q01130 221 aaKnown RBP8.03□□□□□ -1.12
RFC1-210ENST00000505077 RAB32Q13637 225 aa8.03□□□□□ -1.12
RFC1-210ENST00000505077 EXOSC2Q13868 293 aaKnown RBP8.03□□□□□ -1.12
RFC1-210ENST00000505077 C2orf83Q53S99 150 aa8.03□□□□□ -1.12
RFC1-210ENST00000505077 SPINK9Q5DT21 86 aa8.03□□□□□ -1.12
RFC1-210ENST00000505077 PVRIGQ6DKI7 326 aa8.03□□□□□ -1.12
RFC1-210ENST00000505077 TMEM65Q6PI78 240 aa8.03□□□□□ -1.12
RFC1-210ENST00000505077 NECAP1Q8NC96 275 aa8.03□□□□□ -1.12
RFC1-210ENST00000505077 RNASEH2CQ8TDP1 164 aaKnown RBP8.03□□□□□ -1.12
RFC1-210ENST00000505077 WFDC12Q8WWY7 111 aa8.03□□□□□ -1.12
RFC1-210ENST00000505077 C19orf24Q9BVV8 132 aa8.03□□□□□ -1.12
RFC1-210ENST00000505077 MAGT1Q9H0U3 335 aa8.03□□□□□ -1.12
RFC1-210ENST00000505077 TRBV9A0A0B4J1U6 114 aa8.02□□□□□ -1.13
RFC1-210ENST00000505077 A0A0G2JLM5 398 aa8.02□□□□□ -1.13
RFC1-210ENST00000505077 SOX15O60248 233 aa8.02□□□□□ -1.13
RFC1-210ENST00000505077 IFNA10P01566 189 aa8.02□□□□□ -1.13
RFC1-210ENST00000505077 RNASE2P10153 161 aaKnown RBP8.02□□□□□ -1.13
RFC1-210ENST00000505077 PF4V1P10720 104 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms