RNA–Protein interactions for RNA: ENST00000504849.5

RFC1-208, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-208ENST00000504849 PFN1P07737 140 aaKnown RBP3.36□□□□□ -1.87
RFC1-208ENST00000504849 SNRPCP09234 159 aaKnown RBP3.36□□□□□ -1.87
RFC1-208ENST00000504849 ZNF25P17030 456 aaPredicted RBP3.36□□□□□ -1.87
RFC1-208ENST00000504849 COX5AP20674 150 aa3.36□□□□□ -1.87
RFC1-208ENST00000504849 G0S2P27469 103 aa3.36□□□□□ -1.87
RFC1-208ENST00000504849 TDGF1P3P51864 188 aa3.36□□□□□ -1.87
RFC1-208ENST00000504849 UBE2NP61088 152 aaKnown RBP3.36□□□□□ -1.87
RFC1-208ENST00000504849 ERVS71-1P61550 626 aa3.36□□□□□ -1.87
RFC1-208ENST00000504849 RPL23P62829 140 aaKnown RBP3.36□□□□□ -1.87
RFC1-208ENST00000504849 PAFAH1B2P68402 229 aa3.36□□□□□ -1.87
RFC1-208ENST00000504849 RUNX1Q01196 453 aa3.36□□□□□ -1.87
RFC1-208ENST00000504849 ZNF92Q03936 586 aa3.36□□□□□ -1.87
RFC1-208ENST00000504849 TMEM267Q0VDI3 215 aaPredicted RBP3.36□□□□□ -1.87
RFC1-208ENST00000504849 KLRB1Q12918 225 aa3.36□□□□□ -1.87
RFC1-208ENST00000504849 MSMO1Q15800 293 aa3.36□□□□□ -1.87
RFC1-208ENST00000504849 ALKBH6Q3KRA9 238 aa3.36□□□□□ -1.87
RFC1-208ENST00000504849 WDR25Q64LD2 544 aaPredicted RBP3.36□□□□□ -1.87
RFC1-208ENST00000504849 TMEM42Q69YG0 159 aa3.36□□□□□ -1.87
RFC1-208ENST00000504849 ZNF880Q6PDB4 577 aa3.36□□□□□ -1.87
RFC1-208ENST00000504849 TIPARPQ7Z3E1 657 aaKnown RBP3.36□□□□□ -1.87
RFC1-208ENST00000504849 MKXQ8IYA7 352 aa3.36□□□□□ -1.87
RFC1-208ENST00000504849 GAPTQ8N292 157 aa3.36□□□□□ -1.87
RFC1-208ENST00000504849 ZNF709Q8N972 641 aa3.36□□□□□ -1.87
RFC1-208ENST00000504849 TET1Q8NFU7 2136 aa3.36□□□□□ -1.87
RFC1-208ENST00000504849 OR2M3Q8NG83 312 aa3.36□□□□□ -1.87
RFC1-208ENST00000504849 OR4F17Q8NGA8 305 aa3.36□□□□□ -1.87
RFC1-208ENST00000504849 OR1K1Q8NGR3 316 aa3.36□□□□□ -1.87
RFC1-208ENST00000504849 OR4F5Q8NH21 305 aa3.36□□□□□ -1.87
RFC1-208ENST00000504849 CMTM2Q8TAZ6 248 aa3.36□□□□□ -1.87
RFC1-208ENST00000504849 MRPL30Q8TCC3 161 aaKnown RBP3.36□□□□□ -1.87
RFC1-208ENST00000504849 NEK7Q8TDX7 302 aa3.36□□□□□ -1.87
RFC1-208ENST00000504849 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.36□□□□□ -1.87
RFC1-208ENST00000504849 GMPPAQ96IJ6 420 aaPredicted RBP3.36□□□□□ -1.87
RFC1-208ENST00000504849 C2orf48Q96LS8 159 aa3.36□□□□□ -1.87
RFC1-208ENST00000504849 SIGLEC12Q96PQ1 595 aa3.36□□□□□ -1.87
RFC1-208ENST00000504849 OR4F4Q96R69 305 aa3.36□□□□□ -1.87
RFC1-208ENST00000504849 TXNDC17Q9BRA2 123 aa3.36□□□□□ -1.87
RFC1-208ENST00000504849 TMEM147Q9BVK8 224 aa3.36□□□□□ -1.87
RFC1-208ENST00000504849 WDR61Q9GZS3 305 aaKnown RBP3.36□□□□□ -1.87
RFC1-208ENST00000504849 RBKSQ9H477 322 aa3.36□□□□□ -1.87
RFC1-208ENST00000504849 SLC7A10Q9NS82 523 aa3.36□□□□□ -1.87
RFC1-208ENST00000504849 CHD7Q9P2D1 2997 aa3.36□□□□□ -1.87
RFC1-208ENST00000504849 MMP17Q9ULZ9 603 aa3.36□□□□□ -1.87
RFC1-208ENST00000504849 FUT9Q9Y231 359 aa3.36□□□□□ -1.87
RFC1-208ENST00000504849 TRAPPC1Q9Y5R8 145 aa3.36□□□□□ -1.87
RFC1-208ENST00000504849 SPEGQ15772 3267 aa3.36□□□□□ -1.87
RFC1-208ENST00000504849 ABCA12Q86UK0 2595 aa3.36□□□□□ -1.87
RFC1-208ENST00000504849 SAA2-SAA4A0A096LPE2 208 aa3.35□□□□□ -1.87
RFC1-208ENST00000504849 TRBV6-6A0A0A6YYG2 114 aa3.35□□□□□ -1.87
RFC1-208ENST00000504849 SLC22A20A6NK97 555 aa3.35□□□□□ -1.87
RFC1-208ENST00000504849 G3V4G9 280 aa3.35□□□□□ -1.87
RFC1-208ENST00000504849 TRAPPC2LH3BP13 241 aa3.35□□□□□ -1.87
RFC1-208ENST00000504849 TOX3O15405 576 aaPredicted RBP3.35□□□□□ -1.87
RFC1-208ENST00000504849 RS1O15537 224 aa3.35□□□□□ -1.87
RFC1-208ENST00000504849 DLEU1O43261 78 aa3.35□□□□□ -1.87
RFC1-208ENST00000504849 TNFSF12O43508 249 aa3.35□□□□□ -1.87
RFC1-208ENST00000504849 RAMP3O60896 148 aa3.35□□□□□ -1.87
RFC1-208ENST00000504849 PGLYRP1O75594 196 aaPredicted RBP3.35□□□□□ -1.87
RFC1-208ENST00000504849 CEACAM4O75871 244 aa3.35□□□□□ -1.87
RFC1-208ENST00000504849 TOMM40O96008 361 aa3.35□□□□□ -1.87
RFC1-208ENST00000504849 IGHG4P01861 327 aa3.35□□□□□ -1.87
RFC1-208ENST00000504849 STAG3L2P0CL84 134 aa3.35□□□□□ -1.87
RFC1-208ENST00000504849 COX5BP10606 129 aa3.35□□□□□ -1.87
RFC1-208ENST00000504849 GABRG2P18507 467 aa3.35□□□□□ -1.87
RFC1-208ENST00000504849 CRYGSP22914 178 aa3.35□□□□□ -1.87
RFC1-208ENST00000504849 F2RP25116 425 aa3.35□□□□□ -1.87
RFC1-208ENST00000504849 APLNRP35414 380 aa3.35□□□□□ -1.87
RFC1-208ENST00000504849 SAA4P35542 130 aa3.35□□□□□ -1.87
RFC1-208ENST00000504849 DSCR4P56555 118 aaPredicted RBP3.35□□□□□ -1.87
RFC1-208ENST00000504849 FGF12P61328 243 aa3.35□□□□□ -1.87
RFC1-208ENST00000504849 SLC38A11Q08AI6 406 aa3.35□□□□□ -1.87
RFC1-208ENST00000504849 HERPUD1Q15011 391 aa3.35□□□□□ -1.87
RFC1-208ENST00000504849 PIGYQ3MUY2 71 aa3.35□□□□□ -1.87
RFC1-208ENST00000504849 COX19Q49B96 90 aa3.35□□□□□ -1.87
RFC1-208ENST00000504849 COL5A1-AS1Q5SY13 56 aa3.35□□□□□ -1.87
RFC1-208ENST00000504849 FAM27BQ5VT28 67 aa3.35□□□□□ -1.87
RFC1-208ENST00000504849 ZNF705AQ6ZN79 300 aaPredicted RBP3.35□□□□□ -1.87
RFC1-208ENST00000504849 ZNF818PQ6ZRF7 136 aa3.35□□□□□ -1.87
RFC1-208ENST00000504849 NFE4Q86UQ8 179 aa3.35□□□□□ -1.87
RFC1-208ENST00000504849 C17orf82Q86X59 251 aaPredicted RBP3.35□□□□□ -1.87
RFC1-208ENST00000504849 WDFY1Q8IWB7 410 aa3.35□□□□□ -1.87
RFC1-208ENST00000504849 ZNF525Q8N782 197 aa3.35□□□□□ -1.87
RFC1-208ENST00000504849 NECAP1Q8NC96 275 aa3.35□□□□□ -1.87
RFC1-208ENST00000504849 OR51G1Q8NGK1 321 aa3.35□□□□□ -1.87
RFC1-208ENST00000504849 OR10J5Q8NHC4 309 aa3.35□□□□□ -1.87
RFC1-208ENST00000504849 PLPPR1Q8TBJ4 325 aa3.35□□□□□ -1.87
RFC1-208ENST00000504849 DNASE2BQ8WZ79 361 aa3.35□□□□□ -1.87
RFC1-208ENST00000504849 NRGNQ92686 78 aa3.35□□□□□ -1.87
RFC1-208ENST00000504849 TAF15Q92804 592 aaKnown RBP eCLIP3.35□□□□□ -1.87
RFC1-208ENST00000504849 RAB1CQ92928 201 aa3.35□□□□□ -1.87
RFC1-208ENST00000504849 NABP1Q96AH0 204 aa3.35□□□□□ -1.87
RFC1-208ENST00000504849 GPR146Q96CH1 333 aa3.35□□□□□ -1.87
RFC1-208ENST00000504849 RPUSD4Q96CM3 377 aaKnown RBP3.35□□□□□ -1.87
RFC1-208ENST00000504849 CIB3Q96Q77 187 aaPredicted RBP3.35□□□□□ -1.87
RFC1-208ENST00000504849 C20orf144Q9BQM9 153 aa3.35□□□□□ -1.87
RFC1-208ENST00000504849 MIEN1Q9BRT3 115 aa3.35□□□□□ -1.87
RFC1-208ENST00000504849 VAMP8Q9BV40 100 aa3.35□□□□□ -1.87
RFC1-208ENST00000504849 SNHG12Q9BXW3 62 aa3.35□□□□□ -1.87
RFC1-208ENST00000504849 DEFB126Q9BYW3 111 aa3.35□□□□□ -1.87
RFC1-208ENST00000504849 PARLQ9H300 379 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms