RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.99□□□□□ -1.61
NPIPB3-203ENST00000504841 K7EIM0 57 aa4.99□□□□□ -1.61
NPIPB3-203ENST00000504841 DNASE2O00115 360 aaPredicted RBP4.99□□□□□ -1.61
NPIPB3-203ENST00000504841 ST8SIA3O43173 380 aa4.99□□□□□ -1.61
NPIPB3-203ENST00000504841 IFNA10P01566 189 aa4.99□□□□□ -1.61
NPIPB3-203ENST00000504841 IGHV3-48P01763 117 aa4.99□□□□□ -1.61
NPIPB3-203ENST00000504841 AMBPP02760 352 aa4.99□□□□□ -1.61
NPIPB3-203ENST00000504841 FCER2P06734 321 aa4.99□□□□□ -1.61
NPIPB3-203ENST00000504841 TRAPPC2P0DI81 140 aa4.99□□□□□ -1.61
NPIPB3-203ENST00000504841 TRAPPC2BP0DI82 140 aa4.99□□□□□ -1.61
NPIPB3-203ENST00000504841 P0DMU3 169 aa4.99□□□□□ -1.61
NPIPB3-203ENST00000504841 FAM231AP0DMU4 169 aa4.99□□□□□ -1.61
NPIPB3-203ENST00000504841 FAM231CP0DMU5 169 aa4.99□□□□□ -1.61
NPIPB3-203ENST00000504841 PTHLHP12272 177 aa4.99□□□□□ -1.61
NPIPB3-203ENST00000504841 NQO2P16083 231 aa4.99□□□□□ -1.61
NPIPB3-203ENST00000504841 RAB6AP20340 208 aa4.99□□□□□ -1.61
NPIPB3-203ENST00000504841 C4BPBP20851 252 aa4.99□□□□□ -1.61
NPIPB3-203ENST00000504841 RANBP1P43487 201 aa4.99□□□□□ -1.61
NPIPB3-203ENST00000504841 FXYD4P59646 89 aa4.99□□□□□ -1.61
NPIPB3-203ENST00000504841 GNG2P59768 71 aa4.99□□□□□ -1.61
NPIPB3-203ENST00000504841 ERVK-16P61578 105 aa4.99□□□□□ -1.61
NPIPB3-203ENST00000504841 PAFAH1B2P68402 229 aa4.99□□□□□ -1.61
NPIPB3-203ENST00000504841 RELQ04864 619 aaPredicted RBP4.99□□□□□ -1.61
NPIPB3-203ENST00000504841 CATR1Q13166 79 aa4.99□□□□□ -1.61
NPIPB3-203ENST00000504841 CDNFQ49AH0 187 aa4.99□□□□□ -1.61
NPIPB3-203ENST00000504841 CNIH2Q6PI25 160 aa4.99□□□□□ -1.61
NPIPB3-203ENST00000504841 STHQ8IWL8 128 aa4.99□□□□□ -1.61
NPIPB3-203ENST00000504841 OR13F1Q8NGS4 319 aa4.99□□□□□ -1.61
NPIPB3-203ENST00000504841 LSM10Q969L4 123 aaKnown RBP4.99□□□□□ -1.61
NPIPB3-203ENST00000504841 MISP3Q96FF7 219 aa4.99□□□□□ -1.61
NPIPB3-203ENST00000504841 SRSF8Q9BRL6 282 aaKnown RBP4.99□□□□□ -1.61
NPIPB3-203ENST00000504841 AIFM2Q9BRQ8 373 aa4.99□□□□□ -1.61
NPIPB3-203ENST00000504841 NDUFAF3Q9BU61 184 aa4.99□□□□□ -1.61
NPIPB3-203ENST00000504841 CLEC5AQ9NY25 188 aa4.99□□□□□ -1.61
NPIPB3-203ENST00000504841 RABAC1Q9UI14 185 aa4.99□□□□□ -1.61
NPIPB3-203ENST00000504841 NSG2Q9Y328 171 aa4.99□□□□□ -1.61
NPIPB3-203ENST00000504841 F11RQ9Y624 299 aaKnown RBP4.99□□□□□ -1.61
NPIPB3-203ENST00000504841 TRAV14DV4A0A0A6YYC5 116 aa4.98□□□□□ -1.61
NPIPB3-203ENST00000504841 TEX50A0A1B0GTY4 177 aa4.98□□□□□ -1.61
NPIPB3-203ENST00000504841 ERICH4A6NGS2 130 aa4.98□□□□□ -1.61
NPIPB3-203ENST00000504841 IFITM5A6NNB3 132 aa4.98□□□□□ -1.61
NPIPB3-203ENST00000504841 KNCNA6PVL3 124 aa4.98□□□□□ -1.61
NPIPB3-203ENST00000504841 PDCD5O14737 125 aa4.98□□□□□ -1.61
NPIPB3-203ENST00000504841 HPRT1P00492 218 aa4.98□□□□□ -1.61
NPIPB3-203ENST00000504841 SERPINE2P07093 398 aa4.98□□□□□ -1.61
NPIPB3-203ENST00000504841 MIFP14174 115 aa4.98□□□□□ -1.61
NPIPB3-203ENST00000504841 MYL9P24844 172 aa4.98□□□□□ -1.61
NPIPB3-203ENST00000504841 PSMA1P25786 263 aaKnown RBP4.98□□□□□ -1.61
NPIPB3-203ENST00000504841 FCGR2CP31995 323 aa4.98□□□□□ -1.61
NPIPB3-203ENST00000504841 TAS2R31P59538 309 aa4.98□□□□□ -1.61
NPIPB3-203ENST00000504841 ARPC4P59998 168 aa4.98□□□□□ -1.61
NPIPB3-203ENST00000504841 ARL6IP1Q15041 203 aa4.98□□□□□ -1.61
NPIPB3-203ENST00000504841 TRAM1Q15629 374 aa4.98□□□□□ -1.61
NPIPB3-203ENST00000504841 SSX1Q16384 188 aa4.98□□□□□ -1.61
NPIPB3-203ENST00000504841 AADACL3Q5VUY0 350 aa4.98□□□□□ -1.61
NPIPB3-203ENST00000504841 HACD4Q5VWC8 232 aa4.98□□□□□ -1.61
NPIPB3-203ENST00000504841 FAM90A2PQ658T7 463 aa4.98□□□□□ -1.61
NPIPB3-203ENST00000504841 THOC7Q6I9Y2 204 aaKnown RBP4.98□□□□□ -1.61
NPIPB3-203ENST00000504841 TMEM17Q86X19 198 aa4.98□□□□□ -1.61
NPIPB3-203ENST00000504841 MAPKAPK5-AS1Q8N8E1 139 aa4.98□□□□□ -1.61
NPIPB3-203ENST00000504841 OR1L8Q8NGR8 309 aa4.98□□□□□ -1.61
NPIPB3-203ENST00000504841 ST8SIA2Q92186 375 aa4.98□□□□□ -1.61
NPIPB3-203ENST00000504841 SLC25A46Q96AG3 418 aa4.98□□□□□ -1.61
NPIPB3-203ENST00000504841 CCDC90BQ9GZT6 254 aa4.98□□□□□ -1.61
NPIPB3-203ENST00000504841 SLC5A7Q9GZV3 580 aa4.98□□□□□ -1.61
NPIPB3-203ENST00000504841 MS4A6AQ9H2W1 248 aa4.98□□□□□ -1.61
NPIPB3-203ENST00000504841 SCN3BQ9NY72 215 aa4.98□□□□□ -1.61
NPIPB3-203ENST00000504841 ANXA10Q9UJ72 324 aa4.98□□□□□ -1.61
NPIPB3-203ENST00000504841 X6R8D5 127 aa4.98□□□□□ -1.61
NPIPB3-203ENST00000504841 RYR1P21817 5038 aa4.97□□□□□ -1.61
NPIPB3-203ENST00000504841 C16orf90A8MZG2 172 aa4.97□□□□□ -1.61
NPIPB3-203ENST00000504841 RBFOX2O43251 390 aaKnown RBP eCLIP4.97□□□□□ -1.61
NPIPB3-203ENST00000504841 SSX5O60225 188 aa4.97□□□□□ -1.61
NPIPB3-203ENST00000504841 GNG7O60262 68 aa4.97□□□□□ -1.61
NPIPB3-203ENST00000504841 SNAPC5O75971 98 aa4.97□□□□□ -1.61
NPIPB3-203ENST00000504841 DFFBO76075 338 aa4.97□□□□□ -1.61
NPIPB3-203ENST00000504841 PPYP01298 95 aa4.97□□□□□ -1.61
NPIPB3-203ENST00000504841 APOHP02749 345 aaPredicted RBP4.97□□□□□ -1.61
NPIPB3-203ENST00000504841 CTSGP08311 255 aa4.97□□□□□ -1.61
NPIPB3-203ENST00000504841 GIG44P09565 113 aaPredicted RBP4.97□□□□□ -1.61
NPIPB3-203ENST00000504841 ZNF688P0C7X2 276 aa4.97□□□□□ -1.61
NPIPB3-203ENST00000504841 MFAP4P55083 255 aa4.97□□□□□ -1.61
NPIPB3-203ENST00000504841 MLLT11Q13015 90 aaPredicted RBP4.97□□□□□ -1.61
NPIPB3-203ENST00000504841 C12orf74Q32Q52 190 aa4.97□□□□□ -1.61
NPIPB3-203ENST00000504841 LGALS9BQ3B8N2 356 aa4.97□□□□□ -1.61
NPIPB3-203ENST00000504841 SOHLH1Q5JUK2 328 aa4.97□□□□□ -1.61
NPIPB3-203ENST00000504841 ACTL10Q5JWF8 245 aa4.97□□□□□ -1.61
NPIPB3-203ENST00000504841 ZNF773Q6PK81 442 aa4.97□□□□□ -1.61
NPIPB3-203ENST00000504841 HSD17B13Q7Z5P4 300 aaPredicted RBP4.97□□□□□ -1.61
NPIPB3-203ENST00000504841 LILRB2Q8N423 598 aa4.97□□□□□ -1.61
NPIPB3-203ENST00000504841 STXBP6Q8NFX7 210 aa4.97□□□□□ -1.61
NPIPB3-203ENST00000504841 NRG4Q8WWG1 115 aa4.97□□□□□ -1.61
NPIPB3-203ENST00000504841 PINX1Q96BK5 328 aaKnown RBP4.97□□□□□ -1.61
NPIPB3-203ENST00000504841 ZNF414Q96IQ9 312 aa4.97□□□□□ -1.61
NPIPB3-203ENST00000504841 GINS3Q9BRX5 216 aa4.97□□□□□ -1.61
NPIPB3-203ENST00000504841 DCSTAMPQ9H295 470 aa4.97□□□□□ -1.61
NPIPB3-203ENST00000504841 ACOT13Q9NPJ3 140 aa4.97□□□□□ -1.61
NPIPB3-203ENST00000504841 TBC1D24Q9ULP9 559 aa4.97□□□□□ -1.61
NPIPB3-203ENST00000504841 TPRKBQ9Y3C4 175 aa4.97□□□□□ -1.61
NPIPB3-203ENST00000504841 OR51B2Q9Y5P1 312 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms