RNA–Protein interactions for RNA: ENST00000504627.1

SQSTM1-209, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-209ENST00000504627 C15orf61A6NNL5 157 aa14.01□□□□□ -0.17
SQSTM1-209ENST00000504627 SMLR1H3BR10 107 aa14.01□□□□□ -0.17
SQSTM1-209ENST00000504627 SNAPC5O75971 98 aa14.01□□□□□ -0.17
SQSTM1-209ENST00000504627 IL6RP08887 468 aaPredicted RBP14.01□□□□□ -0.17
SQSTM1-209ENST00000504627 OR9G9P0C7N8 305 aa14.01□□□□□ -0.17
SQSTM1-209ENST00000504627 PSMB6P28072 239 aa14.01□□□□□ -0.17
SQSTM1-209ENST00000504627 PPIFP30405 207 aaKnown RBP14.01□□□□□ -0.17
SQSTM1-209ENST00000504627 S100A10P60903 97 aa14.01□□□□□ -0.17
SQSTM1-209ENST00000504627 RAB32Q13637 225 aa14.01□□□□□ -0.17
SQSTM1-209ENST00000504627 ECSCRQ19T08 205 aa14.01□□□□□ -0.17
SQSTM1-209ENST00000504627 LRRC37A5PQ49AS3 106 aa14.01□□□□□ -0.17
SQSTM1-209ENST00000504627 TEX45Q8NA69 505 aa14.01□□□□□ -0.17
SQSTM1-209ENST00000504627 OR4A16Q8NH70 328 aa14.01□□□□□ -0.17
SQSTM1-209ENST00000504627 ABHD5Q8WTS1 349 aa14.01□□□□□ -0.17
SQSTM1-209ENST00000504627 UBE2E2Q96LR5 201 aa14.01□□□□□ -0.17
SQSTM1-209ENST00000504627 FBXL15Q9H469 300 aa14.01□□□□□ -0.17
SQSTM1-209ENST00000504627 PRNDQ9UKY0 176 aa14.01□□□□□ -0.17
SQSTM1-209ENST00000504627 FOXA2Q9Y261 457 aaPredicted RBP14.01□□□□□ -0.17
SQSTM1-209ENST00000504627 TRAV14DV4A0A0A6YYC5 116 aa14□□□□□ -0.17
SQSTM1-209ENST00000504627 BOLA2-SMG1P6H3BVE0 249 aa14□□□□□ -0.17
SQSTM1-209ENST00000504627 UPK2O00526 184 aa14□□□□□ -0.17
SQSTM1-209ENST00000504627 RRHO14718 337 aa14□□□□□ -0.17
SQSTM1-209ENST00000504627 ST8SIA3O43173 380 aa14□□□□□ -0.17
SQSTM1-209ENST00000504627 SCGB1D2O95969 90 aa14□□□□□ -0.17
SQSTM1-209ENST00000504627 MBPP02686 304 aaPredicted RBP14□□□□□ -0.17
SQSTM1-209ENST00000504627 CD69Q07108 199 aa14□□□□□ -0.17
SQSTM1-209ENST00000504627 C9orf66Q5T8R8 295 aa14□□□□□ -0.17
SQSTM1-209ENST00000504627 ZNF429Q86V71 674 aa14□□□□□ -0.17
SQSTM1-209ENST00000504627 TMEM167AQ8TBQ9 72 aa14□□□□□ -0.17
SQSTM1-209ENST00000504627 HYLS1Q96M11 299 aa14□□□□□ -0.17
SQSTM1-209ENST00000504627 OR5B12Q96R08 314 aa14□□□□□ -0.17
SQSTM1-209ENST00000504627 KLK15Q9H2R5 256 aa14□□□□□ -0.17
SQSTM1-209ENST00000504627 SEC14L6B5MCN3 397 aa13.99□□□□□ -0.17
SQSTM1-209ENST00000504627 K7EPK0 472 aa13.99□□□□□ -0.17
SQSTM1-209ENST00000504627 SLC25A17O43808 307 aa13.99□□□□□ -0.17
SQSTM1-209ENST00000504627 RBMXL2O75526 392 aaKnown RBP13.99□□□□□ -0.17
SQSTM1-209ENST00000504627 SLC25A4P12235 298 aa13.99□□□□□ -0.17
SQSTM1-209ENST00000504627 RAB9AP51151 201 aa13.99□□□□□ -0.17
SQSTM1-209ENST00000504627 OR2B8PP59922 312 aa13.99□□□□□ -0.17
SQSTM1-209ENST00000504627 ID3Q02535 119 aa13.99□□□□□ -0.17
SQSTM1-209ENST00000504627 C11orf87Q6NUJ2 197 aa13.99□□□□□ -0.17
SQSTM1-209ENST00000504627 PRSS54Q6PEW0 395 aa13.99□□□□□ -0.17
SQSTM1-209ENST00000504627 NOXA1Q86UR1 476 aa13.99□□□□□ -0.17
SQSTM1-209ENST00000504627 ZNF491Q8N8L2 437 aa13.99□□□□□ -0.17
SQSTM1-209ENST00000504627 OR52E5Q8NH55 327 aa13.99□□□□□ -0.17
SQSTM1-209ENST00000504627 THAP6Q8TBB0 222 aa13.99□□□□□ -0.17
SQSTM1-209ENST00000504627 TMEM14BQ9NUH8 114 aa13.99□□□□□ -0.17
SQSTM1-209ENST00000504627 FKBP11Q9NYL4 201 aa13.99□□□□□ -0.17
SQSTM1-209ENST00000504627 HSPB7Q9UBY9 170 aa13.99□□□□□ -0.17
SQSTM1-209ENST00000504627 RCL1Q9Y2P8 373 aaKnown RBP13.99□□□□□ -0.17
SQSTM1-209ENST00000504627 A0A1W2PN81 502 aa13.98□□□□□ -0.17
SQSTM1-209ENST00000504627 WRBO00258 174 aa13.98□□□□□ -0.17
SQSTM1-209ENST00000504627 MED6O75586 246 aa13.98□□□□□ -0.17
SQSTM1-209ENST00000504627 DEDDO75618 318 aa13.98□□□□□ -0.17
SQSTM1-209ENST00000504627 IGLV1-40P01703 118 aa13.98□□□□□ -0.17
SQSTM1-209ENST00000504627 CRYGBP07316 175 aa13.98□□□□□ -0.17
SQSTM1-209ENST00000504627 LYL1P12980 280 aa13.98□□□□□ -0.17
SQSTM1-209ENST00000504627 CHRNA7P36544 502 aa13.98□□□□□ -0.17
SQSTM1-209ENST00000504627 CX3CL1P78423 397 aa13.98□□□□□ -0.17
SQSTM1-209ENST00000504627 TNFRSF9Q07011 255 aa13.98□□□□□ -0.17
SQSTM1-209ENST00000504627 TMEM267Q0VDI3 215 aaPredicted RBP13.98□□□□□ -0.17
SQSTM1-209ENST00000504627 PSG5Q15238 335 aa13.98□□□□□ -0.17
SQSTM1-209ENST00000504627 Q5BKY6 102 aa13.98□□□□□ -0.17
SQSTM1-209ENST00000504627 OR1N2Q8NGR9 330 aa13.98□□□□□ -0.17
SQSTM1-209ENST00000504627 MYOZ3Q8TDC0 251 aa13.98□□□□□ -0.17
SQSTM1-209ENST00000504627 CLCC1Q96S66 551 aa13.98□□□□□ -0.17
SQSTM1-209ENST00000504627 GNB4Q9HAV0 340 aa13.98□□□□□ -0.17
SQSTM1-209ENST00000504627 MBD2Q9UBB5 411 aa13.98□□□□□ -0.17
SQSTM1-209ENST00000504627 ZNF257Q9Y2Q1 563 aa13.98□□□□□ -0.17
SQSTM1-209ENST00000504627 LSM5Q9Y4Y9 91 aaKnown RBP13.98□□□□□ -0.17
SQSTM1-209ENST00000504627 TRAV3A0A0B4J244 114 aa13.97□□□□□ -0.17
SQSTM1-209ENST00000504627 RLN2P04090 185 aa13.97□□□□□ -0.17
SQSTM1-209ENST00000504627 OR8U8P0C7N1 319 aa13.97□□□□□ -0.17
SQSTM1-209ENST00000504627 PVALBP20472 110 aaPredicted RBP13.97□□□□□ -0.17
SQSTM1-209ENST00000504627 RPL8P62917 257 aaKnown RBP13.97□□□□□ -0.17
SQSTM1-209ENST00000504627 NDPQ00604 133 aa13.97□□□□□ -0.17
SQSTM1-209ENST00000504627 ZNF616Q08AN1 781 aa13.97□□□□□ -0.17
SQSTM1-209ENST00000504627 FHL3Q13643 280 aa13.97□□□□□ -0.17
SQSTM1-209ENST00000504627 MMD2Q8IY49 270 aa13.97□□□□□ -0.17
SQSTM1-209ENST00000504627 OR5B3Q8NH48 314 aa13.97□□□□□ -0.17
SQSTM1-209ENST00000504627 QTRT1Q9BXR0 403 aaKnown RBP13.97□□□□□ -0.17
SQSTM1-209ENST00000504627 METTL1Q9UBP6 276 aaKnown RBP13.97□□□□□ -0.17
SQSTM1-209ENST00000504627 NSG2Q9Y328 171 aa13.97□□□□□ -0.17
SQSTM1-209ENST00000504627 FXYD6-FXYD2A0A087WZ82 144 aa13.96□□□□□ -0.17
SQSTM1-209ENST00000504627 HMSDA8MTL9 139 aa13.96□□□□□ -0.17
SQSTM1-209ENST00000504627 H0YIZ8 118 aa13.96□□□□□ -0.17
SQSTM1-209ENST00000504627 I3L521 148 aa13.96□□□□□ -0.17
SQSTM1-209ENST00000504627 FCN1O00602 326 aa13.96□□□□□ -0.17
SQSTM1-209ENST00000504627 SSSCA1O60232 199 aa13.96□□□□□ -0.17
SQSTM1-209ENST00000504627 LY86O95711 162 aa13.96□□□□□ -0.17
SQSTM1-209ENST00000504627 MAS1LP35410 378 aa13.96□□□□□ -0.17
SQSTM1-209ENST00000504627 EIF2B2P49770 351 aaKnown RBP13.96□□□□□ -0.17
SQSTM1-209ENST00000504627 SPCS3P61009 180 aa13.96□□□□□ -0.17
SQSTM1-209ENST00000504627 POLR2GP62487 172 aaKnown RBP eCLIP13.96□□□□□ -0.17
SQSTM1-209ENST00000504627 KIAA0141Q14154 515 aaPredicted RBP13.96□□□□□ -0.17
SQSTM1-209ENST00000504627 OR11H4Q8NGC9 324 aa13.96□□□□□ -0.17
SQSTM1-209ENST00000504627 RAB40CQ96S21 281 aa13.96□□□□□ -0.17
SQSTM1-209ENST00000504627 C11orf1Q9H5F2 150 aa13.96□□□□□ -0.17
SQSTM1-209ENST00000504627 TPSG1Q9NRR2 321 aa13.96□□□□□ -0.17
SQSTM1-209ENST00000504627 FBXO7Q9Y3I1 522 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms