RNA–Protein interactions for RNA: ENST00000504173.1

NUP54-203, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-203ENST00000504173 NPIPB5A8MRT5 1133 aa7.82□□□□□ -1.16
NUP54-203ENST00000504173 FAM25EA8MYX2 175 aa7.82□□□□□ -1.16
NUP54-203ENST00000504173 H3BUA1 57 aa7.82□□□□□ -1.16
NUP54-203ENST00000504173 CCSO14618 274 aa7.82□□□□□ -1.16
NUP54-203ENST00000504173 IGLV1-40P01703 118 aa7.82□□□□□ -1.16
NUP54-203ENST00000504173 SLC25A6P12236 298 aa7.82□□□□□ -1.16
NUP54-203ENST00000504173 DEFA4P12838 97 aa7.82□□□□□ -1.16
NUP54-203ENST00000504173 PSMB8P28062 276 aa7.82□□□□□ -1.16
NUP54-203ENST00000504173 PSMB6P28072 239 aa7.82□□□□□ -1.16
NUP54-203ENST00000504173 TPPP2P59282 170 aa7.82□□□□□ -1.16
NUP54-203ENST00000504173 SPCS3P61009 180 aa7.82□□□□□ -1.16
NUP54-203ENST00000504173 OXA1LQ15070 435 aa7.82□□□□□ -1.16
NUP54-203ENST00000504173 TATDN3Q17R31 274 aa7.82□□□□□ -1.16
NUP54-203ENST00000504173 AARDQ4LEZ3 155 aa7.82□□□□□ -1.16
NUP54-203ENST00000504173 TCTEX1D4Q5JR98 221 aa7.82□□□□□ -1.16
NUP54-203ENST00000504173 LCNL1Q6ZST4 164 aa7.82□□□□□ -1.16
NUP54-203ENST00000504173 OR52E5Q8NH55 327 aa7.82□□□□□ -1.16
NUP54-203ENST00000504173 MS4A10Q96PG2 267 aa7.82□□□□□ -1.16
NUP54-203ENST00000504173 CITED2Q99967 270 aaPredicted RBP7.82□□□□□ -1.16
NUP54-203ENST00000504173 SLA2Q9H6Q3 261 aa7.82□□□□□ -1.16
NUP54-203ENST00000504173 SACSQ9NZJ4 4579 aa7.81□□□□□ -1.16
NUP54-203ENST00000504173 C13orf42A0A1B0GVH6 325 aa7.81□□□□□ -1.16
NUP54-203ENST00000504173 A0A1W2PRX2 142 aa7.81□□□□□ -1.16
NUP54-203ENST00000504173 C7orf66A4D0T2 115 aa7.81□□□□□ -1.16
NUP54-203ENST00000504173 C5orf51A6NDU8 294 aa7.81□□□□□ -1.16
NUP54-203ENST00000504173 CEBPZOSA8MTT3 80 aa7.81□□□□□ -1.16
NUP54-203ENST00000504173 MPTX1A8MV57 137 aa7.81□□□□□ -1.16
NUP54-203ENST00000504173 SSNA1O43805 119 aa7.81□□□□□ -1.16
NUP54-203ENST00000504173 PITX3O75364 302 aa7.81□□□□□ -1.16
NUP54-203ENST00000504173 PRH1P02810 166 aa7.81□□□□□ -1.16
NUP54-203ENST00000504173 TRGV3P03979 118 aa7.81□□□□□ -1.16
NUP54-203ENST00000504173 RPLP1P05386 114 aaKnown RBP7.81□□□□□ -1.16
NUP54-203ENST00000504173 CRYGCP07315 174 aa7.81□□□□□ -1.16
NUP54-203ENST00000504173 CTRB1P17538 263 aa7.81□□□□□ -1.16
NUP54-203ENST00000504173 RAB9AP51151 201 aa7.81□□□□□ -1.16
NUP54-203ENST00000504173 ERHP84090 104 aaKnown RBP7.81□□□□□ -1.16
NUP54-203ENST00000504173 CD83Q01151 205 aa7.81□□□□□ -1.16
NUP54-203ENST00000504173 WT1-ASQ06250 92 aa7.81□□□□□ -1.16
NUP54-203ENST00000504173 TNFRSF9Q07011 255 aa7.81□□□□□ -1.16
NUP54-203ENST00000504173 IAH1Q2TAA2 248 aaPredicted RBP7.81□□□□□ -1.16
NUP54-203ENST00000504173 CTRB2Q6GPI1 263 aa7.81□□□□□ -1.16
NUP54-203ENST00000504173 C19orf35Q6ZS72 473 aa7.81□□□□□ -1.16
NUP54-203ENST00000504173 NDUFA11Q86Y39 141 aa7.81□□□□□ -1.16
NUP54-203ENST00000504173 RNF152Q8N8N0 203 aa7.81□□□□□ -1.16
NUP54-203ENST00000504173 WWC2-AS2Q96NR7 200 aa7.81□□□□□ -1.16
NUP54-203ENST00000504173 KLK15Q9H2R5 256 aa7.81□□□□□ -1.16
NUP54-203ENST00000504173 TSSC4Q9Y5U2 329 aaPredicted RBP7.81□□□□□ -1.16
NUP54-203ENST00000504173 ALG5Q9Y673 324 aa7.81□□□□□ -1.16
NUP54-203ENST00000504173 DNAH1Q9P2D7 4330 aa7.8□□□□□ -1.16
NUP54-203ENST00000504173 TENM2Q9NT68 2774 aa7.8□□□□□ -1.16
NUP54-203ENST00000504173 NUDT19A8MXV4 375 aa7.8□□□□□ -1.16
NUP54-203ENST00000504173 FAM90A26D6RGX4 464 aa7.8□□□□□ -1.16
NUP54-203ENST00000504173 GOSR2O14653 212 aa7.8□□□□□ -1.16
NUP54-203ENST00000504173 CYB5BO43169 146 aa7.8□□□□□ -1.16
NUP54-203ENST00000504173 OR2J3O76001 311 aa7.8□□□□□ -1.16
NUP54-203ENST00000504173 SNCAP37840 140 aa7.8□□□□□ -1.16
NUP54-203ENST00000504173 RPL23AP62750 156 aaKnown RBP7.8□□□□□ -1.16
NUP54-203ENST00000504173 RHOGP84095 191 aa7.8□□□□□ -1.16
NUP54-203ENST00000504173 NSUN5P1Q3KNT7 163 aa7.8□□□□□ -1.16
NUP54-203ENST00000504173 GSG1LQ6UXU4 331 aa7.8□□□□□ -1.16
NUP54-203ENST00000504173 OR2C3Q8N628 320 aa7.8□□□□□ -1.16
NUP54-203ENST00000504173 OR10C1Q96KK4 312 aa7.8□□□□□ -1.16
NUP54-203ENST00000504173 RBKSQ9H477 322 aa7.8□□□□□ -1.16
NUP54-203ENST00000504173 HEYLQ9NQ87 328 aaPredicted RBP7.8□□□□□ -1.16
NUP54-203ENST00000504173 ZFP57Q9NU63 452 aa7.8□□□□□ -1.16
NUP54-203ENST00000504173 GSKIPQ9P0R6 139 aa7.8□□□□□ -1.16
NUP54-203ENST00000504173 HSPB7Q9UBY9 170 aa7.8□□□□□ -1.16
NUP54-203ENST00000504173 RYR1P21817 5038 aa7.79□□□□□ -1.16
NUP54-203ENST00000504173 FAM223BA6NKX1 122 aa7.79□□□□□ -1.16
NUP54-203ENST00000504173 INS-IGF2F8WCM5 200 aa7.79□□□□□ -1.16
NUP54-203ENST00000504173 MED6O75586 246 aa7.79□□□□□ -1.16
NUP54-203ENST00000504173 BRI3O95415 125 aa7.79□□□□□ -1.16
NUP54-203ENST00000504173 SCGB1D2O95969 90 aa7.79□□□□□ -1.16
NUP54-203ENST00000504173 HIST1H1BP16401 226 aaKnown RBP7.79□□□□□ -1.16
NUP54-203ENST00000504173 NKX2-1P43699 371 aaPredicted RBP7.79□□□□□ -1.16
NUP54-203ENST00000504173 DEFA5Q01523 94 aa7.79□□□□□ -1.16
NUP54-203ENST00000504173 C2orf68Q2NKX9 166 aa7.79□□□□□ -1.16
NUP54-203ENST00000504173 SLC25A24Q6NUK1 477 aa7.79□□□□□ -1.16
NUP54-203ENST00000504173 FAM223AQ8IWN6 122 aa7.79□□□□□ -1.16
NUP54-203ENST00000504173 ZBTB8BQ8NAP8 495 aaPredicted RBP7.79□□□□□ -1.16
NUP54-203ENST00000504173 ZNF114Q8NC26 417 aa7.79□□□□□ -1.16
NUP54-203ENST00000504173 KLHL30-AS1Q8NEE0 82 aa7.79□□□□□ -1.16
NUP54-203ENST00000504173 OR4D5Q8NGN0 318 aa7.79□□□□□ -1.16
NUP54-203ENST00000504173 OR1L6Q8NGR2 347 aa7.79□□□□□ -1.16
NUP54-203ENST00000504173 MYOZ3Q8TDC0 251 aa7.79□□□□□ -1.16
NUP54-203ENST00000504173 DTD1Q8TEA8 209 aa7.79□□□□□ -1.16
NUP54-203ENST00000504173 UBE2E2Q96LR5 201 aa7.79□□□□□ -1.16
NUP54-203ENST00000504173 P2RX4Q99571 388 aa7.79□□□□□ -1.16
NUP54-203ENST00000504173 MAGT1Q9H0U3 335 aa7.79□□□□□ -1.16
NUP54-203ENST00000504173 HIPK2Q9H2X6 1198 aa7.79□□□□□ -1.16
NUP54-203ENST00000504173 MGAT4CQ9UBM8 478 aa7.79□□□□□ -1.16
NUP54-203ENST00000504173 F11RQ9Y624 299 aaKnown RBP7.79□□□□□ -1.16
NUP54-203ENST00000504173 IGLV11-55A0A075B6I3 123 aa7.78□□□□□ -1.16
NUP54-203ENST00000504173 TRBV9A0A0B4J1U6 114 aa7.78□□□□□ -1.16
NUP54-203ENST00000504173 A0A0G2JLM5 398 aa7.78□□□□□ -1.16
NUP54-203ENST00000504173 ADARB2-AS1A8MUL3 147 aa7.78□□□□□ -1.16
NUP54-203ENST00000504173 WRBO00258 174 aa7.78□□□□□ -1.16
NUP54-203ENST00000504173 SYNGR2O43760 224 aa7.78□□□□□ -1.16
NUP54-203ENST00000504173 IGHV3-11P01762 117 aa7.78□□□□□ -1.16
NUP54-203ENST00000504173 IAPPP10997 89 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms