RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 LHFPL5Q8TAF8 219 aa8.65□□□□□ -1.02
ERCC8-208ENST00000497892 GALNT14Q96FL9 552 aa8.65□□□□□ -1.02
ERCC8-208ENST00000497892 CITED4Q96RK1 184 aa8.65□□□□□ -1.02
ERCC8-208ENST00000497892 SLC25A21Q9BQT8 299 aaPredicted RBP8.65□□□□□ -1.02
ERCC8-208ENST00000497892 HINT2Q9BX68 163 aa8.65□□□□□ -1.02
ERCC8-208ENST00000497892 RANGRFQ9HD47 186 aaPredicted RBP8.65□□□□□ -1.02
ERCC8-208ENST00000497892 DNAH3Q8TD57 4116 aa8.64□□□□□ -1.03
ERCC8-208ENST00000497892 A0A0G2JRQ6 117 aa8.64□□□□□ -1.03
ERCC8-208ENST00000497892 ANKRD34BA5PLL1 514 aa8.64□□□□□ -1.03
ERCC8-208ENST00000497892 SEC14L6B5MCN3 397 aa8.64□□□□□ -1.03
ERCC8-208ENST00000497892 TRBV12-3P01733 135 aa8.64□□□□□ -1.03
ERCC8-208ENST00000497892 OR13C7P0DN81 318 aa8.64□□□□□ -1.03
ERCC8-208ENST00000497892 DEFA4P12838 97 aa8.64□□□□□ -1.03
ERCC8-208ENST00000497892 IL7P13232 177 aa8.64□□□□□ -1.03
ERCC8-208ENST00000497892 ZP3P21754 424 aa8.64□□□□□ -1.03
ERCC8-208ENST00000497892 HOXD3P31249 432 aaPredicted RBP8.64□□□□□ -1.03
ERCC8-208ENST00000497892 ADMP35318 185 aa8.64□□□□□ -1.03
ERCC8-208ENST00000497892 INPP1P49441 399 aa8.64□□□□□ -1.03
ERCC8-208ENST00000497892 SUPT4H1P63272 117 aaKnown RBP8.64□□□□□ -1.03
ERCC8-208ENST00000497892 PRCDQ00LT1 54 aa8.64□□□□□ -1.03
ERCC8-208ENST00000497892 ATP5G2Q06055 141 aa8.64□□□□□ -1.03
ERCC8-208ENST00000497892 EGFEM1PQ0D2K5 195 aa8.64□□□□□ -1.03
ERCC8-208ENST00000497892 IZUMO4Q1ZYL8 232 aa8.64□□□□□ -1.03
ERCC8-208ENST00000497892 FAM209BQ5JX69 171 aa8.64□□□□□ -1.03
ERCC8-208ENST00000497892 DCUN1D4Q92564 292 aa8.64□□□□□ -1.03
ERCC8-208ENST00000497892 DLX4Q92988 240 aaPredicted RBP8.64□□□□□ -1.03
ERCC8-208ENST00000497892 RBPMSQ93062 196 aaKnown RBP8.64□□□□□ -1.03
ERCC8-208ENST00000497892 RRNAD1Q96FB5 475 aaKnown RBP8.64□□□□□ -1.03
ERCC8-208ENST00000497892 TMEM56Q96MV1 263 aa8.64□□□□□ -1.03
ERCC8-208ENST00000497892 PEF1Q9UBV8 284 aaKnown RBP8.64□□□□□ -1.03
ERCC8-208ENST00000497892 FBXL7Q9UJT9 491 aa8.64□□□□□ -1.03
ERCC8-208ENST00000497892 DMRT1Q9Y5R6 373 aa8.64□□□□□ -1.03
ERCC8-208ENST00000497892 TMEM56-RWDD3S4R434 201 aa8.64□□□□□ -1.03
ERCC8-208ENST00000497892 PRKDCP78527 4128 aaKnown RBP8.63□□□□□ -1.03
ERCC8-208ENST00000497892 A0A0B4J293 547 aa8.63□□□□□ -1.03
ERCC8-208ENST00000497892 NAP1L6A6NFF2 107 aa8.63□□□□□ -1.03
ERCC8-208ENST00000497892 OVOL1O14753 267 aa8.63□□□□□ -1.03
ERCC8-208ENST00000497892 NDUFB8O95169 186 aa8.63□□□□□ -1.03
ERCC8-208ENST00000497892 AKR1C4P17516 323 aa8.63□□□□□ -1.03
ERCC8-208ENST00000497892 HSPE1P61604 102 aaKnown RBP8.63□□□□□ -1.03
ERCC8-208ENST00000497892 TMEM187Q14656 261 aa8.63□□□□□ -1.03
ERCC8-208ENST00000497892 RBMS2Q15434 407 aaKnown RBP8.63□□□□□ -1.03
ERCC8-208ENST00000497892 AARDQ4LEZ3 155 aa8.63□□□□□ -1.03
ERCC8-208ENST00000497892 C9orf66Q5T8R8 295 aa8.63□□□□□ -1.03
ERCC8-208ENST00000497892 TMEM268Q5VZI3 342 aa8.63□□□□□ -1.03
ERCC8-208ENST00000497892 TMED4Q7Z7H5 227 aa8.63□□□□□ -1.03
ERCC8-208ENST00000497892 FAM219AQ8IW50 185 aa8.63□□□□□ -1.03
ERCC8-208ENST00000497892 SELENOHQ8IZQ5 122 aaKnown RBP8.63□□□□□ -1.03
ERCC8-208ENST00000497892 RNASE11Q8TAA1 199 aaKnown RBP8.63□□□□□ -1.03
ERCC8-208ENST00000497892 IL22RA2Q969J5 263 aa8.63□□□□□ -1.03
ERCC8-208ENST00000497892 BATF3Q9NR55 127 aa8.63□□□□□ -1.03
ERCC8-208ENST00000497892 PTTG2Q9NZH5 202 aa8.63□□□□□ -1.03
ERCC8-208ENST00000497892 KCNIP3Q9Y2W7 256 aa8.63□□□□□ -1.03
ERCC8-208ENST00000497892 F11RQ9Y624 299 aaKnown RBP8.63□□□□□ -1.03
ERCC8-208ENST00000497892 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.62□□□□□ -1.03
ERCC8-208ENST00000497892 CYB5BO43169 146 aa8.62□□□□□ -1.03
ERCC8-208ENST00000497892 NDUFB6O95139 128 aa8.62□□□□□ -1.03
ERCC8-208ENST00000497892 ANXA3P12429 323 aa8.62□□□□□ -1.03
ERCC8-208ENST00000497892 MECP2P51608 486 aaKnown RBP8.62□□□□□ -1.03
ERCC8-208ENST00000497892 CCR6P51684 374 aa8.62□□□□□ -1.03
ERCC8-208ENST00000497892 SRPXP78539 464 aa8.62□□□□□ -1.03
ERCC8-208ENST00000497892 TMEM128Q5BJH2 165 aa8.62□□□□□ -1.03
ERCC8-208ENST00000497892 REC114Q7Z4M0 266 aa8.62□□□□□ -1.03
ERCC8-208ENST00000497892 SLC35G3Q8N808 338 aa8.62□□□□□ -1.03
ERCC8-208ENST00000497892 ZNF114Q8NC26 417 aa8.62□□□□□ -1.03
ERCC8-208ENST00000497892 CCDC140Q96MF4 163 aa8.62□□□□□ -1.03
ERCC8-208ENST00000497892 C7orf50Q9BRJ6 194 aaKnown RBP8.62□□□□□ -1.03
ERCC8-208ENST00000497892 PRR13Q9NZ81 148 aa8.62□□□□□ -1.03
ERCC8-208ENST00000497892 THYN1Q9P016 225 aa8.62□□□□□ -1.03
ERCC8-208ENST00000497892 MFSD2BA6NFX1 497 aa8.61□□□□□ -1.03
ERCC8-208ENST00000497892 INS-IGF2F8WCM5 200 aa8.61□□□□□ -1.03
ERCC8-208ENST00000497892 BMPR1BO00238 502 aa8.61□□□□□ -1.03
ERCC8-208ENST00000497892 ST8SIA3O43173 380 aa8.61□□□□□ -1.03
ERCC8-208ENST00000497892 PRB2P02812 416 aaPredicted RBP8.61□□□□□ -1.03
ERCC8-208ENST00000497892 BTCP35070 178 aa8.61□□□□□ -1.03
ERCC8-208ENST00000497892 INSL3P51460 131 aa8.61□□□□□ -1.03
ERCC8-208ENST00000497892 MFAP2P55001 183 aa8.61□□□□□ -1.03
ERCC8-208ENST00000497892 KRTAP10-11P60412 298 aa8.61□□□□□ -1.03
ERCC8-208ENST00000497892 KLF5Q13887 457 aaPredicted RBP8.61□□□□□ -1.03
ERCC8-208ENST00000497892 ACSM6Q6P461 480 aa8.61□□□□□ -1.03
ERCC8-208ENST00000497892 Q6ZRM9 215 aa8.61□□□□□ -1.03
ERCC8-208ENST00000497892 CENPSQ8N2Z9 138 aa8.61□□□□□ -1.03
ERCC8-208ENST00000497892 OR2C3Q8N628 320 aa8.61□□□□□ -1.03
ERCC8-208ENST00000497892 OR1L6Q8NGR2 347 aa8.61□□□□□ -1.03
ERCC8-208ENST00000497892 OR1P1Q8NH06 330 aa8.61□□□□□ -1.03
ERCC8-208ENST00000497892 EEF1AKMT3Q96AZ1 226 aa8.61□□□□□ -1.03
ERCC8-208ENST00000497892 CXorf58Q96LI9 332 aa8.61□□□□□ -1.03
ERCC8-208ENST00000497892 CCDC32Q9BV29 185 aa8.61□□□□□ -1.03
ERCC8-208ENST00000497892 PLEKHA3Q9HB20 300 aa8.61□□□□□ -1.03
ERCC8-208ENST00000497892 AURKAIP1Q9NWT8 199 aaPredicted RBP8.61□□□□□ -1.03
ERCC8-208ENST00000497892 TRBV7-1A0A0A6YYK4 115 aa8.6□□□□□ -1.03
ERCC8-208ENST00000497892 A0A0B4J2A0 478 aa8.6□□□□□ -1.03
ERCC8-208ENST00000497892 PIGBOS1A0A0B4J2F0 54 aa8.6□□□□□ -1.03
ERCC8-208ENST00000497892 LINC00854A0A1B0GVQ3 168 aa8.6□□□□□ -1.03
ERCC8-208ENST00000497892 CENPXA8MT69 81 aa8.6□□□□□ -1.03
ERCC8-208ENST00000497892 PPP5D1E7EU14 171 aa8.6□□□□□ -1.03
ERCC8-208ENST00000497892 RPEL1Q2QD12 228 aa8.6□□□□□ -1.03
ERCC8-208ENST00000497892 PDLIM3Q53GG5 364 aaPredicted RBP8.6□□□□□ -1.03
ERCC8-208ENST00000497892 SPINK9Q5DT21 86 aa8.6□□□□□ -1.03
ERCC8-208ENST00000497892 NMSQ5H8A3 153 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms