RNA–Protein interactions for RNA: ENST00000497139.5

VEGFA-215, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 2,746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-215ENST00000497139 OR4A16Q8NH70 328 aa10.71□□□□□ -0.69
VEGFA-215ENST00000497139 NPFFR1Q9GZQ6 430 aa10.71□□□□□ -0.69
VEGFA-215ENST00000497139 PLEKHA3Q9HB20 300 aa10.71□□□□□ -0.69
VEGFA-215ENST00000497139 TP73-AS1Q9UF72 201 aa10.71□□□□□ -0.69
VEGFA-215ENST00000497139 PSMB11A5LHX3 300 aa10.71□□□□□ -0.7
VEGFA-215ENST00000497139 OOEPA6NGQ2 149 aa10.71□□□□□ -0.7
VEGFA-215ENST00000497139 DUTP33316 252 aaKnown RBP10.71□□□□□ -0.7
VEGFA-215ENST00000497139 ZNF146Q15072 292 aa10.71□□□□□ -0.7
VEGFA-215ENST00000497139 CLUHP3Q96NS8 147 aa10.71□□□□□ -0.7
VEGFA-215ENST00000497139 SIGMAR1Q99720 223 aa10.71□□□□□ -0.7
VEGFA-215ENST00000497139 SSBP4Q9BWG4 385 aaPredicted RBP10.71□□□□□ -0.7
VEGFA-215ENST00000497139 FNDC4Q9H6D8 234 aaPredicted RBP10.71□□□□□ -0.7
VEGFA-215ENST00000497139 POLDIP2Q9Y2S7 368 aa10.71□□□□□ -0.7
VEGFA-215ENST00000497139 TMEM189A5PLL7 270 aa10.7□□□□□ -0.7
VEGFA-215ENST00000497139 GGTLC3B5MD39 225 aa10.7□□□□□ -0.7
VEGFA-215ENST00000497139 OR9G9P0C7N8 305 aa10.7□□□□□ -0.7
VEGFA-215ENST00000497139 PLP1P60201 277 aa10.7□□□□□ -0.7
VEGFA-215ENST00000497139 CFHR1Q03591 330 aa10.7□□□□□ -0.7
VEGFA-215ENST00000497139 MIR17HGQ75NE6 70 aa10.7□□□□□ -0.7
VEGFA-215ENST00000497139 FAM214BQ7L5A3 538 aa10.7□□□□□ -0.7
VEGFA-215ENST00000497139 UBALD2Q8IYN6 164 aa10.7□□□□□ -0.7
VEGFA-215ENST00000497139 OR10AG1Q8NH19 301 aa10.7□□□□□ -0.7
VEGFA-215ENST00000497139 VSTM2AQ8TAG5 236 aa10.7□□□□□ -0.7
VEGFA-215ENST00000497139 ATP6V0BQ99437 205 aa10.7□□□□□ -0.7
VEGFA-215ENST00000497139 ERVK11-1P61568 191 aa10.7□□□□□ -0.7
VEGFA-215ENST00000497139 WDR54Q9H977 334 aa10.7□□□□□ -0.7
VEGFA-215ENST00000497139 IDI2-AS1Q9NZ38 188 aa10.7□□□□□ -0.7
VEGFA-215ENST00000497139 PPIAL4DF5H284 164 aa10.69□□□□□ -0.7
VEGFA-215ENST00000497139 PRAMEF5Q5TYX0 476 aa10.69□□□□□ -0.7
VEGFA-215ENST00000497139 PRAMEF6Q5VXH4 476 aa10.69□□□□□ -0.7
VEGFA-215ENST00000497139 SYT13Q7L8C5 426 aa10.69□□□□□ -0.7
VEGFA-215ENST00000497139 LINC00470Q9BZP3 86 aa10.69□□□□□ -0.7
VEGFA-215ENST00000497139 EYSQ5T1H1 3165 aa10.69□□□□□ -0.7
VEGFA-215ENST00000497139 BRWD1Q9NSI6 2320 aa10.69□□□□□ -0.7
VEGFA-215ENST00000497139 A0A0G2JLM5 398 aa10.69□□□□□ -0.7
VEGFA-215ENST00000497139 C5orf49A4QMS7 147 aa10.69□□□□□ -0.7
VEGFA-215ENST00000497139 SIVA1O15304 175 aa10.69□□□□□ -0.7
VEGFA-215ENST00000497139 NGFP01138 241 aa10.69□□□□□ -0.7
VEGFA-215ENST00000497139 HBBP68871 147 aa10.69□□□□□ -0.7
VEGFA-215ENST00000497139 DEFB133Q30KQ1 61 aa10.69□□□□□ -0.7
VEGFA-215ENST00000497139 SLC23A3Q6PIS1 610 aa10.69□□□□□ -0.7
VEGFA-215ENST00000497139 ZNF841Q6ZN19 808 aa10.69□□□□□ -0.7
VEGFA-215ENST00000497139 PHF7Q9BWX1 381 aaPredicted RBP10.69□□□□□ -0.7
VEGFA-215ENST00000497139 XIRP2A4UGR9 3374 aa10.68□□□□□ -0.7
VEGFA-215ENST00000497139 C12orf77C9JDV5 145 aa10.68□□□□□ -0.7
VEGFA-215ENST00000497139 GNG7O60262 68 aa10.68□□□□□ -0.7
VEGFA-215ENST00000497139 MYF5P13349 255 aa10.68□□□□□ -0.7
VEGFA-215ENST00000497139 SCGB2A2Q13296 93 aa10.68□□□□□ -0.7
VEGFA-215ENST00000497139 UBALD1Q8TB05 177 aa10.68□□□□□ -0.7
VEGFA-215ENST00000497139 FAM168AQ92567 244 aa10.68□□□□□ -0.7
VEGFA-215ENST00000497139 SNRNP40Q96DI7 357 aaKnown RBP10.68□□□□□ -0.7
VEGFA-215ENST00000497139 JMJD8Q96S16 334 aa10.68□□□□□ -0.7
VEGFA-215ENST00000497139 ZNF355PQ9NSJ1 428 aa10.68□□□□□ -0.7
VEGFA-215ENST00000497139 A0A0G2JMM0 328 aa10.68□□□□□ -0.7
VEGFA-215ENST00000497139 A0A1W2PPB8 328 aa10.68□□□□□ -0.7
VEGFA-215ENST00000497139 LINC00473A8K010 186 aa10.68□□□□□ -0.7
VEGFA-215ENST00000497139 KIR3DP1A8MWS1 328 aa10.68□□□□□ -0.7
VEGFA-215ENST00000497139 APOA2P02652 100 aa10.68□□□□□ -0.7
VEGFA-215ENST00000497139 ERVK-16P61578 105 aa10.68□□□□□ -0.7
VEGFA-215ENST00000497139 HSD52Q0P140 79 aa10.68□□□□□ -0.7
VEGFA-215ENST00000497139 OR9G4Q8NGQ1 327 aa10.68□□□□□ -0.7
VEGFA-215ENST00000497139 RTL8AQ9BWD3 113 aa10.68□□□□□ -0.7
VEGFA-215ENST00000497139 OCIAD1Q9NX40 245 aa10.68□□□□□ -0.7
VEGFA-215ENST00000497139 LOXL2Q9Y4K0 774 aa10.68□□□□□ -0.7
VEGFA-215ENST00000497139 TRIOBPQ9H2D6 2365 aa10.67□□□□□ -0.7
VEGFA-215ENST00000497139 PPIAL4EA0A075B759 164 aa10.67□□□□□ -0.7
VEGFA-215ENST00000497139 PPIAL4CA0A0B4J2A2 164 aa10.67□□□□□ -0.7
VEGFA-215ENST00000497139 CA1P00915 261 aaPredicted RBP10.67□□□□□ -0.7
VEGFA-215ENST00000497139 PPIAL4FP0DN26 164 aa10.67□□□□□ -0.7
VEGFA-215ENST00000497139 AZU1P20160 251 aa10.67□□□□□ -0.7
VEGFA-215ENST00000497139 CCNOP22674 350 aa10.67□□□□□ -0.7
VEGFA-215ENST00000497139 OR1C1Q15619 314 aa10.67□□□□□ -0.7
VEGFA-215ENST00000497139 LYSMD4Q5XG99 296 aa10.67□□□□□ -0.7
VEGFA-215ENST00000497139 FA2HQ7L5A8 372 aa10.67□□□□□ -0.7
VEGFA-215ENST00000497139 ZNF503Q96F45 646 aa10.67□□□□□ -0.7
VEGFA-215ENST00000497139 NABP2Q9BQ15 211 aa10.67□□□□□ -0.7
VEGFA-215ENST00000497139 NDFIP1Q9BT67 221 aa10.67□□□□□ -0.7
VEGFA-215ENST00000497139 MRPL32Q9BYC8 188 aaKnown RBP10.67□□□□□ -0.7
VEGFA-215ENST00000497139 PROK2Q9HC23 129 aa10.67□□□□□ -0.7
VEGFA-215ENST00000497139 GCM1Q9NP62 436 aa10.67□□□□□ -0.7
VEGFA-215ENST00000497139 PLSCR4Q9NRQ2 329 aa10.67□□□□□ -0.7
VEGFA-215ENST00000497139 A0A1W2PPM0 123 aa10.67□□□□□ -0.7
VEGFA-215ENST00000497139 HIGD1CA8MV81 97 aa10.67□□□□□ -0.7
VEGFA-215ENST00000497139 H3BUT2 72 aa10.67□□□□□ -0.7
VEGFA-215ENST00000497139 B3GALT5-AS1P59052 145 aa10.67□□□□□ -0.7
VEGFA-215ENST00000497139 CT83Q5H943 113 aa10.67□□□□□ -0.7
VEGFA-215ENST00000497139 BHLHA15Q7RTS1 189 aaPredicted RBP10.67□□□□□ -0.7
VEGFA-215ENST00000497139 SSX8Q7RTT4 187 aa10.67□□□□□ -0.7
VEGFA-215ENST00000497139 GGNQ86UU5 652 aa10.67□□□□□ -0.7
VEGFA-215ENST00000497139 SSBP3Q9BWW4 388 aaPredicted RBP10.67□□□□□ -0.7
VEGFA-215ENST00000497139 F2RL2O00254 374 aa10.66□□□□□ -0.7
VEGFA-215ENST00000497139 SP1P08047 785 aa10.66□□□□□ -0.7
VEGFA-215ENST00000497139 CCL3P10147 92 aa10.66□□□□□ -0.7
VEGFA-215ENST00000497139 WDR82Q6UXN9 313 aa10.66□□□□□ -0.7
VEGFA-215ENST00000497139 LRRC29Q8WV35 223 aa10.66□□□□□ -0.7
VEGFA-215ENST00000497139 FTH1P19P0C7X4 201 aa10.66□□□□□ -0.7
VEGFA-215ENST00000497139 LINC00173Q6ZV60 143 aa10.66□□□□□ -0.7
VEGFA-215ENST00000497139 OR4X2Q8NGF9 303 aa10.66□□□□□ -0.7
VEGFA-215ENST00000497139 CT55Q8WUE5 264 aa10.66□□□□□ -0.7
VEGFA-215ENST00000497139 TCF19Q9Y242 345 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms