RNA–Protein interactions for RNA: ENST00000497026.5

CSMD3-208, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 1,406 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-208ENST00000497026 ZNF878C9JN71 531 aa4.03□□□□□ -1.76
CSMD3-208ENST00000497026 F5H5K5 113 aa4.03□□□□□ -1.76
CSMD3-208ENST00000497026 CRLF1O75462 422 aa4.03□□□□□ -1.76
CSMD3-208ENST00000497026 TYMSP04818 313 aa4.03□□□□□ -1.76
CSMD3-208ENST00000497026 EGR1P18146 543 aa4.03□□□□□ -1.76
CSMD3-208ENST00000497026 GNRHRP30968 328 aa4.03□□□□□ -1.76
CSMD3-208ENST00000497026 GPR6P46095 362 aaPredicted RBP4.03□□□□□ -1.76
CSMD3-208ENST00000497026 GABRA2P47869 451 aa4.03□□□□□ -1.76
CSMD3-208ENST00000497026 FHITP49789 147 aa4.03□□□□□ -1.76
CSMD3-208ENST00000497026 MTCP1P56278 107 aa4.03□□□□□ -1.76
CSMD3-208ENST00000497026 LMO4P61968 165 aa4.03□□□□□ -1.76
CSMD3-208ENST00000497026 TNFAIP6P98066 277 aaPredicted RBP4.03□□□□□ -1.76
CSMD3-208ENST00000497026 ZNF92Q03936 586 aa4.03□□□□□ -1.76
CSMD3-208ENST00000497026 ARL6IP1Q15041 203 aa4.03□□□□□ -1.76
CSMD3-208ENST00000497026 SMIM21Q3B7S5 101 aa4.03□□□□□ -1.76
CSMD3-208ENST00000497026 GLYATL3Q5SZD4 288 aa4.03□□□□□ -1.76
CSMD3-208ENST00000497026 FAM166AQ6J272 317 aa4.03□□□□□ -1.76
CSMD3-208ENST00000497026 PRR27Q6MZM9 219 aa4.03□□□□□ -1.76
CSMD3-208ENST00000497026 OR5AS1Q8N127 324 aa4.03□□□□□ -1.76
CSMD3-208ENST00000497026 BHLHE23Q8NDY6 225 aa4.03□□□□□ -1.76
CSMD3-208ENST00000497026 Q8NFD4 153 aa4.03□□□□□ -1.76
CSMD3-208ENST00000497026 OR5L1Q8NGL2 311 aa4.03□□□□□ -1.76
CSMD3-208ENST00000497026 OR2AJ1Q8NGZ0 328 aa4.03□□□□□ -1.76
CSMD3-208ENST00000497026 OR2G3Q8NGZ4 309 aa4.03□□□□□ -1.76
CSMD3-208ENST00000497026 OR5B3Q8NH48 314 aa4.03□□□□□ -1.76
CSMD3-208ENST00000497026 OR2AE1Q8NHA4 323 aa4.03□□□□□ -1.76
CSMD3-208ENST00000497026 RNF133Q8WVZ7 376 aa4.03□□□□□ -1.76
CSMD3-208ENST00000497026 ITLN1Q8WWA0 313 aa4.03□□□□□ -1.76
CSMD3-208ENST00000497026 SDSLQ96GA7 329 aa4.03□□□□□ -1.76
CSMD3-208ENST00000497026 OR10C1Q96KK4 312 aa4.03□□□□□ -1.76
CSMD3-208ENST00000497026 SPIN2AQ99865 258 aa4.03□□□□□ -1.76
CSMD3-208ENST00000497026 SPIN2BQ9BPZ2 258 aa4.03□□□□□ -1.76
CSMD3-208ENST00000497026 PYGO2Q9BRQ0 406 aa4.03□□□□□ -1.76
CSMD3-208ENST00000497026 AGMATQ9BSE5 352 aa4.03□□□□□ -1.76
CSMD3-208ENST00000497026 ABHD6Q9BV23 337 aa4.03□□□□□ -1.76
CSMD3-208ENST00000497026 PARP12Q9H0J9 701 aaKnown RBP4.03□□□□□ -1.76
CSMD3-208ENST00000497026 OR51I2Q9H344 312 aa4.03□□□□□ -1.76
CSMD3-208ENST00000497026 GPR84Q9NQS5 396 aa4.03□□□□□ -1.76
CSMD3-208ENST00000497026 YAE1D1Q9NRH1 226 aa4.03□□□□□ -1.76
CSMD3-208ENST00000497026 ZNF586Q9NXT0 402 aa4.03□□□□□ -1.76
CSMD3-208ENST00000497026 ZNF319Q9P2F9 582 aa4.03□□□□□ -1.76
CSMD3-208ENST00000497026 RNF150Q9ULK6 438 aa4.03□□□□□ -1.76
CSMD3-208ENST00000497026 ANAPC10Q9UM13 185 aa4.03□□□□□ -1.76
CSMD3-208ENST00000497026 GPR132Q9UNW8 380 aa4.03□□□□□ -1.76
CSMD3-208ENST00000497026 FUT9Q9Y231 359 aa4.03□□□□□ -1.76
CSMD3-208ENST00000497026 WIPI2Q9Y4P8 454 aa4.03□□□□□ -1.76
CSMD3-208ENST00000497026 ARHGAP32A7KAX9 2087 aa4.02□□□□□ -1.77
CSMD3-208ENST00000497026 ZANQ9Y493 2812 aa4.02□□□□□ -1.77
CSMD3-208ENST00000497026 IGHV3-64DA0A0J9YX35 117 aa4.02□□□□□ -1.77
CSMD3-208ENST00000497026 A0A1B0GV50 99 aa4.02□□□□□ -1.77
CSMD3-208ENST00000497026 RHODO00212 210 aa4.02□□□□□ -1.77
CSMD3-208ENST00000497026 CCL25O15444 150 aa4.02□□□□□ -1.77
CSMD3-208ENST00000497026 LMX1BO60663 402 aa4.02□□□□□ -1.77
CSMD3-208ENST00000497026 BCL2P10415 239 aa4.02□□□□□ -1.77
CSMD3-208ENST00000497026 ALOX5APP20292 161 aa4.02□□□□□ -1.77
CSMD3-208ENST00000497026 SRPXP78539 464 aa4.02□□□□□ -1.77
CSMD3-208ENST00000497026 LCN2P80188 198 aa4.02□□□□□ -1.77
CSMD3-208ENST00000497026 BAXQ07812 192 aa4.02□□□□□ -1.77
CSMD3-208ENST00000497026 IL15RAQ13261 267 aa4.02□□□□□ -1.77
CSMD3-208ENST00000497026 GNMTQ14749 295 aa4.02□□□□□ -1.77
CSMD3-208ENST00000497026 VAMP3Q15836 100 aa4.02□□□□□ -1.77
CSMD3-208ENST00000497026 ADIRFQ15847 76 aa4.02□□□□□ -1.77
CSMD3-208ENST00000497026 ANKRD55Q3KP44 614 aa4.02□□□□□ -1.77
CSMD3-208ENST00000497026 OCIAD2Q56VL3 154 aa4.02□□□□□ -1.77
CSMD3-208ENST00000497026 PIK3CD-AS1Q5SR53 167 aa4.02□□□□□ -1.77
CSMD3-208ENST00000497026 C1orf100Q5SVJ3 147 aa4.02□□□□□ -1.77
CSMD3-208ENST00000497026 ZNF684Q5T5D7 378 aa4.02□□□□□ -1.77
CSMD3-208ENST00000497026 CYP2G1PQ6ZSU1 146 aa4.02□□□□□ -1.77
CSMD3-208ENST00000497026 IL17RELQ6ZVW7 336 aa4.02□□□□□ -1.77
CSMD3-208ENST00000497026 C16orf82Q7Z2V1 217 aa4.02□□□□□ -1.77
CSMD3-208ENST00000497026 TCTEX1D1Q8N7M0 179 aa4.02□□□□□ -1.77
CSMD3-208ENST00000497026 OR2Z1Q8NG97 314 aa4.02□□□□□ -1.77
CSMD3-208ENST00000497026 OR1L6Q8NGR2 347 aa4.02□□□□□ -1.77
CSMD3-208ENST00000497026 OTOSQ8NHW6 89 aa4.02□□□□□ -1.77
CSMD3-208ENST00000497026 GLMPQ8WWB7 406 aa4.02□□□□□ -1.77
CSMD3-208ENST00000497026 CCL17Q92583 94 aa4.02□□□□□ -1.77
CSMD3-208ENST00000497026 NPIPB3Q92617 1050 aa4.02□□□□□ -1.77
CSMD3-208ENST00000497026 SPTSSAQ969W0 71 aa4.02□□□□□ -1.77
CSMD3-208ENST00000497026 TMEM230Q96A57 120 aa4.02□□□□□ -1.77
CSMD3-208ENST00000497026 MRGPRFQ96AM1 343 aa4.02□□□□□ -1.77
CSMD3-208ENST00000497026 ABHD14BQ96IU4 210 aa4.02□□□□□ -1.77
CSMD3-208ENST00000497026 ZNF479Q96JC4 524 aa4.02□□□□□ -1.77
CSMD3-208ENST00000497026 OR2V2Q96R30 315 aa4.02□□□□□ -1.77
CSMD3-208ENST00000497026 RARRES2Q99969 163 aa4.02□□□□□ -1.77
CSMD3-208ENST00000497026 KCNK15Q9H427 330 aa4.02□□□□□ -1.77
CSMD3-208ENST00000497026 C5orf66Q9H5L9 145 aa4.02□□□□□ -1.77
CSMD3-208ENST00000497026 ZNF430Q9H8G1 570 aaPredicted RBP4.02□□□□□ -1.77
CSMD3-208ENST00000497026 MOB1AQ9H8S9 216 aa4.02□□□□□ -1.77
CSMD3-208ENST00000497026 CENPMQ9NSP4 180 aa4.02□□□□□ -1.77
CSMD3-208ENST00000497026 SLC35D1Q9NTN3 355 aa4.02□□□□□ -1.77
CSMD3-208ENST00000497026 TMEM106BQ9NUM4 274 aa4.02□□□□□ -1.77
CSMD3-208ENST00000497026 TMEM160Q9NX00 188 aa4.02□□□□□ -1.77
CSMD3-208ENST00000497026 TAS2R4Q9NYW5 299 aa4.02□□□□□ -1.77
CSMD3-208ENST00000497026 IL19Q9UHD0 177 aa4.02□□□□□ -1.77
CSMD3-208ENST00000497026 MRM2Q9UI43 246 aaKnown RBP4.02□□□□□ -1.77
CSMD3-208ENST00000497026 PAM16Q9Y3D7 125 aa4.02□□□□□ -1.77
CSMD3-208ENST00000497026 TRAV1-1A0A0B4J248 108 aa4.01□□□□□ -1.77
CSMD3-208ENST00000497026 hCG_38984A0A1B0GV85 526 aa4.01□□□□□ -1.77
CSMD3-208ENST00000497026 ZNF320A2RRD8 509 aa4.01□□□□□ -1.77
CSMD3-208ENST00000497026 CD300LBA8K4G0 201 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms