RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 FOXF1Q12946 379 aa2.5□□□□□ -2.01
SNRNP48-202ENST00000496946 FOXF2Q12947 444 aa2.5□□□□□ -2.01
SNRNP48-202ENST00000496946 MSMO1Q15800 293 aa2.5□□□□□ -2.01
SNRNP48-202ENST00000496946 ODF3L2Q3SX64 289 aa2.5□□□□□ -2.01
SNRNP48-202ENST00000496946 ZNF718Q3SXZ3 478 aa2.5□□□□□ -2.01
SNRNP48-202ENST00000496946 AMTNQ6UX39 209 aa2.5□□□□□ -2.01
SNRNP48-202ENST00000496946 TIFABQ6ZNK6 161 aa2.5□□□□□ -2.01
SNRNP48-202ENST00000496946 ZNF550Q7Z398 422 aa2.5□□□□□ -2.01
SNRNP48-202ENST00000496946 ZCCHC24Q8N2G6 241 aaKnown RBP2.5□□□□□ -2.01
SNRNP48-202ENST00000496946 CIARTQ8N365 385 aaPredicted RBP2.5□□□□□ -2.01
SNRNP48-202ENST00000496946 Q8N976 141 aa2.5□□□□□ -2.01
SNRNP48-202ENST00000496946 KLK6Q92876 244 aa2.5□□□□□ -2.01
SNRNP48-202ENST00000496946 ELSPBP1Q96BH3 223 aa2.5□□□□□ -2.01
SNRNP48-202ENST00000496946 VGLL1Q99990 258 aa2.5□□□□□ -2.01
SNRNP48-202ENST00000496946 TMEM204Q9BSN7 226 aa2.5□□□□□ -2.01
SNRNP48-202ENST00000496946 TMEM147Q9BVK8 224 aa2.5□□□□□ -2.01
SNRNP48-202ENST00000496946 SCRT1Q9BWW7 348 aa2.5□□□□□ -2.01
SNRNP48-202ENST00000496946 WRAP73Q9P2S5 460 aaPredicted RBP2.5□□□□□ -2.01
SNRNP48-202ENST00000496946 FNDC1Q4ZHG4 1894 aaPredicted RBP2.5□□□□□ -2.01
SNRNP48-202ENST00000496946 H7C1H1 209 aa2.5□□□□□ -2.01
SNRNP48-202ENST00000496946 UQCRQO14949 82 aa2.5□□□□□ -2.01
SNRNP48-202ENST00000496946 PITX3O75364 302 aa2.5□□□□□ -2.01
SNRNP48-202ENST00000496946 GYPAP02724 150 aa2.5□□□□□ -2.01
SNRNP48-202ENST00000496946 HSPB1P04792 205 aaKnown RBP2.5□□□□□ -2.01
SNRNP48-202ENST00000496946 EIF4EP06730 217 aaKnown RBP2.5□□□□□ -2.01
SNRNP48-202ENST00000496946 ZNF286BP0CG31 522 aa2.5□□□□□ -2.01
SNRNP48-202ENST00000496946 PIPP12273 146 aaPredicted RBP2.5□□□□□ -2.01
SNRNP48-202ENST00000496946 CA7P43166 264 aa2.5□□□□□ -2.01
SNRNP48-202ENST00000496946 PSMB3P49720 205 aa2.5□□□□□ -2.01
SNRNP48-202ENST00000496946 SLC25A1P53007 311 aa2.5□□□□□ -2.01
SNRNP48-202ENST00000496946 RPS24P62847 133 aaKnown RBP2.5□□□□□ -2.01
SNRNP48-202ENST00000496946 LINC00303Q3SY05 128 aa2.5□□□□□ -2.01
SNRNP48-202ENST00000496946 FKBP1CQ5VVH2 108 aa2.5□□□□□ -2.01
SNRNP48-202ENST00000496946 GAGE2AQ6NT46 116 aa2.5□□□□□ -2.01
SNRNP48-202ENST00000496946 SLC25A34Q6PIV7 304 aa2.5□□□□□ -2.01
SNRNP48-202ENST00000496946 COX8CQ7Z4L0 72 aa2.5□□□□□ -2.01
SNRNP48-202ENST00000496946 HSD11B1LQ7Z5J1 315 aa2.5□□□□□ -2.01
SNRNP48-202ENST00000496946 SLC25A42Q86VD7 318 aa2.5□□□□□ -2.01
SNRNP48-202ENST00000496946 SIGLECL1Q8N7X8 197 aa2.5□□□□□ -2.01
SNRNP48-202ENST00000496946 KLHDC9Q8NEP7 349 aa2.5□□□□□ -2.01
SNRNP48-202ENST00000496946 OR52P1PQ8NH57 321 aa2.5□□□□□ -2.01
SNRNP48-202ENST00000496946 OR51H1Q8NH63 302 aa2.5□□□□□ -2.01
SNRNP48-202ENST00000496946 SGMS2Q8NHU3 365 aa2.5□□□□□ -2.01
SNRNP48-202ENST00000496946 C18orf32Q8TCD1 76 aa2.5□□□□□ -2.01
SNRNP48-202ENST00000496946 LINC00526Q96FQ7 95 aa2.5□□□□□ -2.01
SNRNP48-202ENST00000496946 DPH3Q96FX2 82 aa2.5□□□□□ -2.01
SNRNP48-202ENST00000496946 PRELID3AQ96N28 172 aa2.5□□□□□ -2.01
SNRNP48-202ENST00000496946 AMELYQ99218 206 aa2.5□□□□□ -2.01
SNRNP48-202ENST00000496946 MRPL20Q9BYC9 149 aaKnown RBP2.5□□□□□ -2.01
SNRNP48-202ENST00000496946 STARD5Q9NSY2 213 aa2.5□□□□□ -2.01
SNRNP48-202ENST00000496946 TAAR3PQ9P1P4 343 aa2.5□□□□□ -2.01
SNRNP48-202ENST00000496946 RABAC1Q9UI14 185 aa2.5□□□□□ -2.01
SNRNP48-202ENST00000496946 KLF13Q9Y2Y9 288 aaPredicted RBP2.5□□□□□ -2.01
SNRNP48-202ENST00000496946 CHCHD2Q9Y6H1 151 aaPredicted RBP2.5□□□□□ -2.01
SNRNP48-202ENST00000496946 TNRC6CQ9HCJ0 1690 aaKnown RBP2.5□□□□□ -2.01
SNRNP48-202ENST00000496946 LAMB1P07942 1786 aa2.49□□□□□ -2.01
SNRNP48-202ENST00000496946 ANKRD31Q8N7Z5 1873 aa2.49□□□□□ -2.01
SNRNP48-202ENST00000496946 TTC3P53804 2025 aa2.49□□□□□ -2.01
SNRNP48-202ENST00000496946 TET3O43151 1660 aa2.49□□□□□ -2.01
SNRNP48-202ENST00000496946 TRDV1A0A1B0GX56 115 aa2.49□□□□□ -2.01
SNRNP48-202ENST00000496946 DPRXA6NFQ7 191 aa2.49□□□□□ -2.01
SNRNP48-202ENST00000496946 EDIL3O43854 480 aa2.49□□□□□ -2.01
SNRNP48-202ENST00000496946 APOMO95445 188 aa2.49□□□□□ -2.01
SNRNP48-202ENST00000496946 PLAUP00749 431 aa2.49□□□□□ -2.01
SNRNP48-202ENST00000496946 WNT1P04628 370 aa2.49□□□□□ -2.01
SNRNP48-202ENST00000496946 ELK1P19419 428 aa2.49□□□□□ -2.01
SNRNP48-202ENST00000496946 RPL22P35268 128 aaKnown RBP2.49□□□□□ -2.01
SNRNP48-202ENST00000496946 ASIPP42127 132 aa2.49□□□□□ -2.01
SNRNP48-202ENST00000496946 ATP5G3P48201 142 aa2.49□□□□□ -2.01
SNRNP48-202ENST00000496946 APOC4P55056 127 aa2.49□□□□□ -2.01
SNRNP48-202ENST00000496946 FOXA3P55318 350 aaPredicted RBP2.49□□□□□ -2.01
SNRNP48-202ENST00000496946 KRTDAPP60985 99 aa2.49□□□□□ -2.01
SNRNP48-202ENST00000496946 GNB2P62879 340 aa2.49□□□□□ -2.01
SNRNP48-202ENST00000496946 CX3CL1P78423 397 aa2.49□□□□□ -2.01
SNRNP48-202ENST00000496946 RRN3P1Q2M238 152 aa2.49□□□□□ -2.01
SNRNP48-202ENST00000496946 C12orf74Q32Q52 190 aa2.49□□□□□ -2.01
SNRNP48-202ENST00000496946 VMA21Q3ZAQ7 101 aa2.49□□□□□ -2.01
SNRNP48-202ENST00000496946 TCF23Q7RTU1 214 aa2.49□□□□□ -2.01
SNRNP48-202ENST00000496946 PAQR4Q8N4S7 273 aaPredicted RBP2.49□□□□□ -2.01
SNRNP48-202ENST00000496946 ANKRD29Q8N6D5 301 aa2.49□□□□□ -2.01
SNRNP48-202ENST00000496946 APOBEC4Q8WW27 367 aaKnown RBP2.49□□□□□ -2.01
SNRNP48-202ENST00000496946 SRSF12Q8WXF0 261 aaKnown RBP2.49□□□□□ -2.01
SNRNP48-202ENST00000496946 TM2D1Q9BX74 207 aa2.49□□□□□ -2.01
SNRNP48-202ENST00000496946 CYTL1Q9NRR1 136 aa2.49□□□□□ -2.01
SNRNP48-202ENST00000496946 ZNF835Q9Y2P0 537 aa2.49□□□□□ -2.01
SNRNP48-202ENST00000496946 XRN1Q8IZH2 1706 aaKnown RBP2.49□□□□□ -2.01
SNRNP48-202ENST00000496946 ADAMTSL1Q8N6G6 1762 aa2.49□□□□□ -2.01
SNRNP48-202ENST00000496946 COL3A1P02461 1466 aaPredicted RBP2.49□□□□□ -2.01
SNRNP48-202ENST00000496946 GLI3P10071 1580 aa2.49□□□□□ -2.01
SNRNP48-202ENST00000496946 hCG_1818297A0A087WSY0 165 aa2.49□□□□□ -2.01
SNRNP48-202ENST00000496946 A0A1B0GWB2 263 aa2.49□□□□□ -2.01
SNRNP48-202ENST00000496946 GRIFINA4D1Z8 144 aa2.49□□□□□ -2.01
SNRNP48-202ENST00000496946 LINC01548A6NM66 108 aa2.49□□□□□ -2.01
SNRNP48-202ENST00000496946 NCBP2LA6PVI3 153 aaKnown RBP2.49□□□□□ -2.01
SNRNP48-202ENST00000496946 A8MT66 165 aa2.49□□□□□ -2.01
SNRNP48-202ENST00000496946 M0R129 80 aa2.49□□□□□ -2.01
SNRNP48-202ENST00000496946 FKBP2P26885 142 aaKnown RBP2.49□□□□□ -2.01
SNRNP48-202ENST00000496946 TAS2R45P59539 299 aa2.49□□□□□ -2.01
SNRNP48-202ENST00000496946 RPL18AQ02543 176 aaKnown RBP2.49□□□□□ -2.01
SNRNP48-202ENST00000496946 PRDX1Q06830 199 aaKnown RBP2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms