RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 SLC17A3O00476 420 aa5.11□□□□□ -1.59
SSBP1-213ENST00000496622 FGF16O43320 207 aa5.11□□□□□ -1.59
SSBP1-213ENST00000496622 SPRY3O43610 288 aa5.11□□□□□ -1.59
SSBP1-213ENST00000496622 OR2A4O95047 310 aa5.11□□□□□ -1.59
SSBP1-213ENST00000496622 IGHV3-13P01766 116 aa5.11□□□□□ -1.59
SSBP1-213ENST00000496622 IGHV3-7P01780 117 aa5.11□□□□□ -1.59
SSBP1-213ENST00000496622 MMP9P14780 707 aa5.11□□□□□ -1.59
SSBP1-213ENST00000496622 F2RP25116 425 aa5.11□□□□□ -1.59
SSBP1-213ENST00000496622 FCGR2CP31995 323 aa5.11□□□□□ -1.59
SSBP1-213ENST00000496622 FGF12P61328 243 aa5.11□□□□□ -1.59
SSBP1-213ENST00000496622 RPS23P62266 143 aaKnown RBP5.11□□□□□ -1.59
SSBP1-213ENST00000496622 SUMF2Q8NBJ7 301 aa5.11□□□□□ -1.59
SSBP1-213ENST00000496622 OR5B12Q96R08 314 aa5.11□□□□□ -1.59
SSBP1-213ENST00000496622 OR2A7Q96R45 310 aa5.11□□□□□ -1.59
SSBP1-213ENST00000496622 MRPL27Q9P0M9 148 aaKnown RBP5.11□□□□□ -1.59
SSBP1-213ENST00000496622 ERG28Q9UKR5 140 aa5.11□□□□□ -1.59
SSBP1-213ENST00000496622 IGKV1-6A0A0C4DH72 117 aa5.1□□□□□ -1.59
SSBP1-213ENST00000496622 C9JQL5 133 aa5.1□□□□□ -1.59
SSBP1-213ENST00000496622 RS1O15537 224 aa5.1□□□□□ -1.59
SSBP1-213ENST00000496622 TNFSF12O43508 249 aa5.1□□□□□ -1.59
SSBP1-213ENST00000496622 PRAF2O60831 178 aa5.1□□□□□ -1.59
SSBP1-213ENST00000496622 ACTL6BO94805 426 aa5.1□□□□□ -1.59
SSBP1-213ENST00000496622 CLDN1O95832 211 aa5.1□□□□□ -1.59
SSBP1-213ENST00000496622 IGLV1-44P01699 117 aa5.1□□□□□ -1.59
SSBP1-213ENST00000496622 CXCL1P09341 107 aa5.1□□□□□ -1.59
SSBP1-213ENST00000496622 CD34P28906 385 aa5.1□□□□□ -1.59
SSBP1-213ENST00000496622 SSBP1Q04837 148 aaKnown RBP5.1□□□□□ -1.59
SSBP1-213ENST00000496622 C11orf53Q8IXP5 236 aa5.1□□□□□ -1.59
SSBP1-213ENST00000496622 PARP12Q9H0J9 701 aaKnown RBP5.1□□□□□ -1.59
SSBP1-213ENST00000496622 TMEM100Q9NV29 134 aa5.1□□□□□ -1.59
SSBP1-213ENST00000496622 NAT8Q9UHE5 227 aa5.1□□□□□ -1.59
SSBP1-213ENST00000496622 A0A087WX48 190 aa5.1□□□□□ -1.59
SSBP1-213ENST00000496622 OOEPA6NGQ2 149 aa5.1□□□□□ -1.59
SSBP1-213ENST00000496622 SNRPGP15A8MWD9 76 aa5.1□□□□□ -1.59
SSBP1-213ENST00000496622 ZNF207O43670 478 aaKnown RBP5.1□□□□□ -1.59
SSBP1-213ENST00000496622 IL5P05113 134 aa5.1□□□□□ -1.59
SSBP1-213ENST00000496622 HINT1P49773 126 aaPredicted RBP5.1□□□□□ -1.59
SSBP1-213ENST00000496622 SRPXP78539 464 aa5.1□□□□□ -1.59
SSBP1-213ENST00000496622 HIST1H1AQ02539 215 aaPredicted RBP5.1□□□□□ -1.59
SSBP1-213ENST00000496622 SRSF4Q08170 494 aaKnown RBP5.1□□□□□ -1.59
SSBP1-213ENST00000496622 HMGN3Q15651 99 aa5.1□□□□□ -1.59
SSBP1-213ENST00000496622 VAX1Q5SQQ9 334 aa5.1□□□□□ -1.59
SSBP1-213ENST00000496622 SLC25A42Q86VD7 318 aa5.1□□□□□ -1.59
SSBP1-213ENST00000496622 LHFPL1Q86WI0 220 aa5.1□□□□□ -1.59
SSBP1-213ENST00000496622 NEUROG1Q92886 237 aa5.1□□□□□ -1.59
SSBP1-213ENST00000496622 MUCL1Q96DR8 90 aa5.1□□□□□ -1.59
SSBP1-213ENST00000496622 RAB40CQ96S21 281 aa5.1□□□□□ -1.59
SSBP1-213ENST00000496622 DCTN5Q9BTE1 182 aa5.1□□□□□ -1.59
SSBP1-213ENST00000496622 MRPL16Q9NX20 251 aaKnown RBP5.1□□□□□ -1.59
SSBP1-213ENST00000496622 BET1LQ9NYM9 111 aa5.1□□□□□ -1.59
SSBP1-213ENST00000496622 MPC1Q9Y5U8 109 aa5.1□□□□□ -1.59
SSBP1-213ENST00000496622 IGHV3OR15-7A0A075B7D8 119 aa5.1□□□□□ -1.59
SSBP1-213ENST00000496622 IGKV1D-13A0A0B4J2D9 117 aa5.1□□□□□ -1.59
SSBP1-213ENST00000496622 H7BYZ3 331 aa5.1□□□□□ -1.59
SSBP1-213ENST00000496622 OR2H2O95918 312 aa5.1□□□□□ -1.59
SSBP1-213ENST00000496622 CRYAAP02489 173 aa5.1□□□□□ -1.59
SSBP1-213ENST00000496622 PGA5P0DJD9 388 aa5.1□□□□□ -1.59
SSBP1-213ENST00000496622 IGKV1-13P0DP09 117 aa5.1□□□□□ -1.59
SSBP1-213ENST00000496622 EGR1P18146 543 aa5.1□□□□□ -1.59
SSBP1-213ENST00000496622 PRTN3P24158 256 aa5.1□□□□□ -1.59
SSBP1-213ENST00000496622 CAV2P51636 162 aa5.1□□□□□ -1.59
SSBP1-213ENST00000496622 TCL1AP56279 114 aa5.1□□□□□ -1.59
SSBP1-213ENST00000496622 LINC00205P59089 165 aa5.1□□□□□ -1.59
SSBP1-213ENST00000496622 HSD52Q0P140 79 aa5.1□□□□□ -1.59
SSBP1-213ENST00000496622 TMEM267Q0VDI3 215 aaPredicted RBP5.1□□□□□ -1.59
SSBP1-213ENST00000496622 TIMM23BQ5SRD1 257 aa5.1□□□□□ -1.59
SSBP1-213ENST00000496622 UTF1Q5T230 341 aa5.1□□□□□ -1.59
SSBP1-213ENST00000496622 AMMECR1LQ6DCA0 310 aa5.1□□□□□ -1.59
SSBP1-213ENST00000496622 ZNF343Q6P1L6 599 aa5.1□□□□□ -1.59
SSBP1-213ENST00000496622 DEFB108BQ8NET1 73 aa5.1□□□□□ -1.59
SSBP1-213ENST00000496622 OR8G5Q8NG78 346 aa5.1□□□□□ -1.59
SSBP1-213ENST00000496622 PLPPR1Q8TBJ4 325 aa5.1□□□□□ -1.59
SSBP1-213ENST00000496622 PPP1R1CQ8WVI7 109 aa5.1□□□□□ -1.59
SSBP1-213ENST00000496622 GPR82Q96P67 336 aa5.1□□□□□ -1.59
SSBP1-213ENST00000496622 KRTAP4-12Q9BQ66 201 aa5.1□□□□□ -1.59
SSBP1-213ENST00000496622 ZNF471Q9BX82 626 aaPredicted RBP5.1□□□□□ -1.59
SSBP1-213ENST00000496622 LYRM2Q9NU23 88 aaPredicted RBP5.1□□□□□ -1.59
SSBP1-213ENST00000496622 VAX2Q9UIW0 290 aa5.1□□□□□ -1.59
SSBP1-213ENST00000496622 ANAPC10Q9UM13 185 aa5.1□□□□□ -1.59
SSBP1-213ENST00000496622 PAM16Q9Y3D7 125 aa5.1□□□□□ -1.59
SSBP1-213ENST00000496622 LRRK2Q5S007 2527 aa5.09□□□□□ -1.59
SSBP1-213ENST00000496622 A0A0U1RRA0 63 aa5.09□□□□□ -1.59
SSBP1-213ENST00000496622 KANTRA0A1W2PQU2 76 aa5.09□□□□□ -1.59
SSBP1-213ENST00000496622 GAGE12HA6NDE8 117 aa5.09□□□□□ -1.59
SSBP1-213ENST00000496622 IQCF6A8MYZ5 107 aa5.09□□□□□ -1.59
SSBP1-213ENST00000496622 DEGS1O15121 323 aa5.09□□□□□ -1.59
SSBP1-213ENST00000496622 OR2J3O76001 311 aa5.09□□□□□ -1.59
SSBP1-213ENST00000496622 IFNA1P01562 189 aa5.09□□□□□ -1.59
SSBP1-213ENST00000496622 AADACP22760 399 aa5.09□□□□□ -1.59
SSBP1-213ENST00000496622 CCL8P80075 99 aa5.09□□□□□ -1.59
SSBP1-213ENST00000496622 DUX4L9Q6RFH8 374 aaPredicted RBP5.09□□□□□ -1.59
SSBP1-213ENST00000496622 GTF2H5Q6ZYL4 71 aa5.09□□□□□ -1.59
SSBP1-213ENST00000496622 TCTEX1D1Q8N7M0 179 aa5.09□□□□□ -1.59
SSBP1-213ENST00000496622 RFESDQ8TAC1 157 aa5.09□□□□□ -1.59
SSBP1-213ENST00000496622 Q8WTZ3 238 aa5.09□□□□□ -1.59
SSBP1-213ENST00000496622 SECTM1Q8WVN6 248 aa5.09□□□□□ -1.59
SSBP1-213ENST00000496622 PSMG3Q9BT73 122 aaPredicted RBP5.09□□□□□ -1.59
SSBP1-213ENST00000496622 RTL8AQ9BWD3 113 aa5.09□□□□□ -1.59
SSBP1-213ENST00000496622 IL36GQ9NZH8 169 aa5.09□□□□□ -1.59
SSBP1-213ENST00000496622 JKAMPQ9P055 326 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms