RNA–Protein interactions for RNA: ENST00000496363.5

USF1-207, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 990 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-207ENST00000496363 DHRS11Q6UWP2 260 aa9.63□□□□□ -0.87
USF1-207ENST00000496363 OR5B3Q8NH48 314 aa9.63□□□□□ -0.87
USF1-207ENST00000496363 RNF183Q96D59 192 aa9.63□□□□□ -0.87
USF1-207ENST00000496363 DGCR14Q96DF8 476 aaKnown RBP9.63□□□□□ -0.87
USF1-207ENST00000496363 HECTD4Q9Y4D8 3996 aa9.62□□□□□ -0.87
USF1-207ENST00000496363 IGHV3-49A0A0A0MS15 119 aa9.62□□□□□ -0.87
USF1-207ENST00000496363 OR4C46A6NHA9 309 aa9.62□□□□□ -0.87
USF1-207ENST00000496363 UBE2CO00762 179 aa9.62□□□□□ -0.87
USF1-207ENST00000496363 SNAPC5O75971 98 aa9.62□□□□□ -0.87
USF1-207ENST00000496363 FCGR2BP31994 310 aaPredicted RBP9.62□□□□□ -0.87
USF1-207ENST00000496363 PHLDA2Q53GA4 152 aa9.62□□□□□ -0.87
USF1-207ENST00000496363 UBE2NLQ5JXB2 153 aa9.62□□□□□ -0.87
USF1-207ENST00000496363 TMEM69Q5SWH9 247 aa9.62□□□□□ -0.87
USF1-207ENST00000496363 CEMP1Q6PRD7 247 aaPredicted RBP9.62□□□□□ -0.87
USF1-207ENST00000496363 APRG1Q8IVJ8 170 aa9.62□□□□□ -0.87
USF1-207ENST00000496363 STPG3Q8N7X2 389 aa9.62□□□□□ -0.87
USF1-207ENST00000496363 SAMD12Q8N8I0 201 aa9.62□□□□□ -0.87
USF1-207ENST00000496363 OR5H2Q8NGV7 314 aa9.62□□□□□ -0.87
USF1-207ENST00000496363 BORCS5Q969J3 196 aa9.62□□□□□ -0.87
USF1-207ENST00000496363 S100A16Q96FQ6 103 aaKnown RBP9.62□□□□□ -0.87
USF1-207ENST00000496363 RNF2Q99496 336 aa9.62□□□□□ -0.87
USF1-207ENST00000496363 HERC2O95714 4834 aa9.61□□□□□ -0.87
USF1-207ENST00000496363 KIR2DL5BA0A0G2JN68 375 aa9.61□□□□□ -0.87
USF1-207ENST00000496363 KIR2DL5BA0A0G2JPC4 375 aa9.61□□□□□ -0.87
USF1-207ENST00000496363 K7EMT4 169 aa9.61□□□□□ -0.87
USF1-207ENST00000496363 GPR31O00270 319 aa9.61□□□□□ -0.87
USF1-207ENST00000496363 IGHV3-48P01763 117 aa9.61□□□□□ -0.87
USF1-207ENST00000496363 CTSGP08311 255 aa9.61□□□□□ -0.87
USF1-207ENST00000496363 NAT1P18440 290 aa9.61□□□□□ -0.87
USF1-207ENST00000496363 TFPI2P48307 235 aa9.61□□□□□ -0.87
USF1-207ENST00000496363 KIR2DL5AQ8N109 375 aa9.61□□□□□ -0.87
USF1-207ENST00000496363 TSPAN14Q8NG11 270 aa9.61□□□□□ -0.87
USF1-207ENST00000496363 KIR2DL5BQ8NHK3 375 aa9.61□□□□□ -0.87
USF1-207ENST00000496363 MAP6D1Q9H9H5 199 aa9.61□□□□□ -0.87
USF1-207ENST00000496363 SMPXQ9UHP9 88 aa9.61□□□□□ -0.87
USF1-207ENST00000496363 PRNDQ9UKY0 176 aa9.61□□□□□ -0.87
USF1-207ENST00000496363 IGKV3-7A0A075B6H7 116 aa9.6□□□□□ -0.87
USF1-207ENST00000496363 IGHV3OR16-13A0A075B7E8 117 aa9.6□□□□□ -0.87
USF1-207ENST00000496363 IGHV3-74A0A0B4J1X5 117 aa9.6□□□□□ -0.87
USF1-207ENST00000496363 IGHV7-4-1A0A0J9YVY3 117 aa9.6□□□□□ -0.87
USF1-207ENST00000496363 C15orf61A6NNL5 157 aa9.6□□□□□ -0.87
USF1-207ENST00000496363 C15orf62A8K5M9 175 aa9.6□□□□□ -0.87
USF1-207ENST00000496363 CHEK1O14757 476 aa9.6□□□□□ -0.87
USF1-207ENST00000496363 HLA-DMAP28067 261 aa9.6□□□□□ -0.87
USF1-207ENST00000496363 HRH1P35367 487 aa9.6□□□□□ -0.87
USF1-207ENST00000496363 RPS19P39019 145 aaKnown RBP9.6□□□□□ -0.87
USF1-207ENST00000496363 TAS2R46P59540 309 aa9.6□□□□□ -0.87
USF1-207ENST00000496363 LSM3P62310 102 aaKnown RBP9.6□□□□□ -0.87
USF1-207ENST00000496363 LYSMD2Q8IV50 215 aa9.6□□□□□ -0.87
USF1-207ENST00000496363 CMTM1Q8IZ96 169 aa9.6□□□□□ -0.87
USF1-207ENST00000496363 OR1P1Q8NH06 330 aa9.6□□□□□ -0.87
USF1-207ENST00000496363 SLC25A46Q96AG3 418 aa9.6□□□□□ -0.87
USF1-207ENST00000496363 MISP3Q96FF7 219 aa9.6□□□□□ -0.87
USF1-207ENST00000496363 GALNT14Q96FL9 552 aa9.6□□□□□ -0.87
USF1-207ENST00000496363 TMEM56Q96MV1 263 aa9.6□□□□□ -0.87
USF1-207ENST00000496363 ATP6V0BQ99437 205 aa9.6□□□□□ -0.87
USF1-207ENST00000496363 RHPN1-AS1Q9BWJ2 59 aa9.6□□□□□ -0.87
USF1-207ENST00000496363 TMEM14BQ9NUH8 114 aa9.6□□□□□ -0.87
USF1-207ENST00000496363 I3L2K1 104 aa9.59□□□□□ -0.87
USF1-207ENST00000496363 TMEM127O75204 238 aa9.59□□□□□ -0.87
USF1-207ENST00000496363 YIF1AO95070 293 aa9.59□□□□□ -0.87
USF1-207ENST00000496363 IGKV1-39P01597 117 aa9.59□□□□□ -0.87
USF1-207ENST00000496363 IGKV1D-39P04432 117 aa9.59□□□□□ -0.87
USF1-207ENST00000496363 EIF4EP06730 217 aaKnown RBP9.59□□□□□ -0.87
USF1-207ENST00000496363 PRSS3P35030 304 aa9.59□□□□□ -0.87
USF1-207ENST00000496363 CADM3Q8N126 398 aa9.59□□□□□ -0.87
USF1-207ENST00000496363 GBGT1Q8N5D6 347 aa9.59□□□□□ -0.87
USF1-207ENST00000496363 RPP25LQ8N5L8 163 aaKnown RBP9.59□□□□□ -0.87
USF1-207ENST00000496363 TMEM116Q8NCL8 245 aa9.59□□□□□ -0.87
USF1-207ENST00000496363 OR6F1Q8NGZ6 308 aa9.59□□□□□ -0.87
USF1-207ENST00000496363 NUPL2O15504 423 aaKnown RBP9.58□□□□□ -0.88
USF1-207ENST00000496363 MT-CO2P00403 227 aa9.58□□□□□ -0.88
USF1-207ENST00000496363 ATF4P18848 351 aaPredicted RBP9.58□□□□□ -0.88
USF1-207ENST00000496363 RELQ04864 619 aaPredicted RBP9.58□□□□□ -0.88
USF1-207ENST00000496363 KCTD21Q4G0X4 260 aa9.58□□□□□ -0.88
USF1-207ENST00000496363 TBC1D26Q86UD7 250 aa9.58□□□□□ -0.88
USF1-207ENST00000496363 CROCCP3Q8IVE0 287 aa9.58□□□□□ -0.88
USF1-207ENST00000496363 PHLDA1Q8WV24 401 aaPredicted RBP9.58□□□□□ -0.88
USF1-207ENST00000496363 YIPF6Q96EC8 236 aa9.58□□□□□ -0.88
USF1-207ENST00000496363 SEC22AQ96IW7 307 aa9.58□□□□□ -0.88
USF1-207ENST00000496363 FKBP11Q9NYL4 201 aa9.58□□□□□ -0.88
USF1-207ENST00000496363 KLK5Q9Y337 293 aaPredicted RBP9.58□□□□□ -0.88
USF1-207ENST00000496363 AGRNO00468 2067 aa9.58□□□□□ -0.88
USF1-207ENST00000496363 DEDDO75618 318 aa9.57□□□□□ -0.88
USF1-207ENST00000496363 MFAP4P55083 255 aa9.57□□□□□ -0.88
USF1-207ENST00000496363 IZUMO4Q1ZYL8 232 aa9.57□□□□□ -0.88
USF1-207ENST00000496363 SPINK9Q5DT21 86 aa9.57□□□□□ -0.88
USF1-207ENST00000496363 FAM90A2PQ658T7 463 aa9.57□□□□□ -0.88
USF1-207ENST00000496363 TMEM217Q8N7C4 229 aa9.57□□□□□ -0.88
USF1-207ENST00000496363 OR4A16Q8NH70 328 aa9.57□□□□□ -0.88
USF1-207ENST00000496363 GPX8Q8TED1 209 aa9.57□□□□□ -0.88
USF1-207ENST00000496363 MRGPRFQ96AM1 343 aa9.57□□□□□ -0.88
USF1-207ENST00000496363 PINX1Q96BK5 328 aaKnown RBP9.57□□□□□ -0.88
USF1-207ENST00000496363 OR10C1Q96KK4 312 aa9.57□□□□□ -0.88
USF1-207ENST00000496363 TSC22D3Q99576 134 aa9.57□□□□□ -0.88
USF1-207ENST00000496363 C6orf62Q9GZU0 229 aaPredicted RBP9.57□□□□□ -0.88
USF1-207ENST00000496363 NXF2Q9GZY0 626 aaKnown RBP9.57□□□□□ -0.88
USF1-207ENST00000496363 CSTL1Q9H114 145 aa9.57□□□□□ -0.88
USF1-207ENST00000496363 TRAV14DV4A0A0A6YYC5 116 aa9.56□□□□□ -0.88
USF1-207ENST00000496363 MPTX1A8MV57 137 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms