RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 UFC1Q9Y3C8 167 aa11.86□□□□□ -0.51
HDAC4-213ENST00000496347 OR2T8A6NH00 312 aa11.85□□□□□ -0.51
HDAC4-213ENST00000496347 B3GALNT1O75752 331 aa11.85□□□□□ -0.51
HDAC4-213ENST00000496347 ATG12O94817 140 aa11.85□□□□□ -0.51
HDAC4-213ENST00000496347 IGKV1-39P01597 117 aa11.85□□□□□ -0.51
HDAC4-213ENST00000496347 IGKV1D-39P04432 117 aa11.85□□□□□ -0.51
HDAC4-213ENST00000496347 EDN2P20800 178 aa11.85□□□□□ -0.51
HDAC4-213ENST00000496347 PPP5CP53041 499 aa11.85□□□□□ -0.51
HDAC4-213ENST00000496347 MFAP2P55001 183 aa11.85□□□□□ -0.51
HDAC4-213ENST00000496347 TMBIM6P55061 237 aa11.85□□□□□ -0.51
HDAC4-213ENST00000496347 PRCDQ00LT1 54 aa11.85□□□□□ -0.51
HDAC4-213ENST00000496347 MEF2DQ14814 521 aa11.85□□□□□ -0.51
HDAC4-213ENST00000496347 SLC25A24Q6NUK1 477 aa11.85□□□□□ -0.51
HDAC4-213ENST00000496347 UNQ9165/PRO28630Q6UXU0 137 aa11.85□□□□□ -0.51
HDAC4-213ENST00000496347 SLC16A13Q7RTY0 426 aa11.85□□□□□ -0.51
HDAC4-213ENST00000496347 CLVS1Q8IUQ0 354 aaPredicted RBP11.85□□□□□ -0.51
HDAC4-213ENST00000496347 TMEM61Q8N0U2 210 aa11.85□□□□□ -0.51
HDAC4-213ENST00000496347 CCDC71LQ8N9Z2 235 aa11.85□□□□□ -0.51
HDAC4-213ENST00000496347 MUC7Q8TAX7 377 aa11.85□□□□□ -0.51
HDAC4-213ENST00000496347 CITED4Q96RK1 184 aa11.85□□□□□ -0.51
HDAC4-213ENST00000496347 PLEKHA3Q9HB20 300 aa11.85□□□□□ -0.51
HDAC4-213ENST00000496347 DAZ1Q9NQZ3 744 aaKnown RBP11.85□□□□□ -0.51
HDAC4-213ENST00000496347 GAR1Q9NY12 217 aaKnown RBP11.85□□□□□ -0.51
HDAC4-213ENST00000496347 ZNF785A8K8V0 405 aa11.84□□□□□ -0.51
HDAC4-213ENST00000496347 K7EIM0 57 aa11.84□□□□□ -0.51
HDAC4-213ENST00000496347 NOL3O60936 208 aaKnown RBP11.84□□□□□ -0.51
HDAC4-213ENST00000496347 RAB3DO95716 219 aa11.84□□□□□ -0.51
HDAC4-213ENST00000496347 C8orf88P0DMB2 117 aa11.84□□□□□ -0.51
HDAC4-213ENST00000496347 PI3P19957 117 aa11.84□□□□□ -0.51
HDAC4-213ENST00000496347 GUCA2BQ16661 112 aa11.84□□□□□ -0.51
HDAC4-213ENST00000496347 HAGHQ16775 308 aa11.84□□□□□ -0.51
HDAC4-213ENST00000496347 STEAP1BQ6NZ63 245 aa11.84□□□□□ -0.51
HDAC4-213ENST00000496347 BTNL8Q6UX41 500 aa11.84□□□□□ -0.51
HDAC4-213ENST00000496347 OR2C3Q8N628 320 aa11.84□□□□□ -0.51
HDAC4-213ENST00000496347 OR4D10Q8NGI6 311 aa11.84□□□□□ -0.51
HDAC4-213ENST00000496347 TERB2Q8NHR7 220 aa11.84□□□□□ -0.51
HDAC4-213ENST00000496347 ZFAND1Q8TCF1 268 aa11.84□□□□□ -0.51
HDAC4-213ENST00000496347 SCARB1Q8WTV0 552 aa11.84□□□□□ -0.51
HDAC4-213ENST00000496347 WDR89Q96FK6 387 aaPredicted RBP11.84□□□□□ -0.51
HDAC4-213ENST00000496347 COPZ2Q9P299 210 aa11.84□□□□□ -0.51
HDAC4-213ENST00000496347 MLXQ9UH92 298 aa11.84□□□□□ -0.51
HDAC4-213ENST00000496347 TRAV25A0A0B4J276 109 aa11.83□□□□□ -0.52
HDAC4-213ENST00000496347 NDUFA4O00483 81 aa11.83□□□□□ -0.52
HDAC4-213ENST00000496347 CTDSPLO15194 276 aa11.83□□□□□ -0.52
HDAC4-213ENST00000496347 AKR1C2P52895 323 aa11.83□□□□□ -0.52
HDAC4-213ENST00000496347 ANKRD55Q3KP44 614 aa11.83□□□□□ -0.52
HDAC4-213ENST00000496347 UXS1Q8NBZ7 420 aa11.83□□□□□ -0.52
HDAC4-213ENST00000496347 OR13C8Q8NGS7 320 aa11.83□□□□□ -0.52
HDAC4-213ENST00000496347 DYNC2LI1Q8TCX1 351 aa11.83□□□□□ -0.52
HDAC4-213ENST00000496347 TP53RKQ96S44 253 aa11.83□□□□□ -0.52
HDAC4-213ENST00000496347 MRPL27Q9P0M9 148 aaKnown RBP11.83□□□□□ -0.52
HDAC4-213ENST00000496347 CEPT1Q9Y6K0 416 aa11.83□□□□□ -0.52
HDAC4-213ENST00000496347 RYR3Q15413 4870 aa11.82□□□□□ -0.52
HDAC4-213ENST00000496347 C3orf85A0A1B0GTC6 90 aa11.82□□□□□ -0.52
HDAC4-213ENST00000496347 F8W735 103 aaPredicted RBP11.82□□□□□ -0.52
HDAC4-213ENST00000496347 CTDSP2O14595 271 aa11.82□□□□□ -0.52
HDAC4-213ENST00000496347 CTSDP07339 412 aaPredicted RBP11.82□□□□□ -0.52
HDAC4-213ENST00000496347 CD7P09564 240 aa11.82□□□□□ -0.52
HDAC4-213ENST00000496347 P0C879 139 aa11.82□□□□□ -0.52
HDAC4-213ENST00000496347 FCGR2BP31994 310 aaPredicted RBP11.82□□□□□ -0.52
HDAC4-213ENST00000496347 RPL5P46777 297 aaKnown RBP11.82□□□□□ -0.52
HDAC4-213ENST00000496347 HSPE1P61604 102 aaKnown RBP11.82□□□□□ -0.52
HDAC4-213ENST00000496347 SURF2Q15527 256 aaPredicted RBP11.82□□□□□ -0.52
HDAC4-213ENST00000496347 SCGB2B2Q4G0G5 96 aa11.82□□□□□ -0.52
HDAC4-213ENST00000496347 TM4SF20Q53R12 229 aa11.82□□□□□ -0.52
HDAC4-213ENST00000496347 ISOC1Q96CN7 298 aa11.82□□□□□ -0.52
HDAC4-213ENST00000496347 IGHV3-35A0A0C4DH35 117 aa11.81□□□□□ -0.52
HDAC4-213ENST00000496347 OR11H12B2RN74 326 aa11.81□□□□□ -0.52
HDAC4-213ENST00000496347 INS-IGF2F8WCM5 200 aa11.81□□□□□ -0.52
HDAC4-213ENST00000496347 IGKV1-5P01602 117 aa11.81□□□□□ -0.52
HDAC4-213ENST00000496347 UCP1P25874 307 aa11.81□□□□□ -0.52
HDAC4-213ENST00000496347 RELQ04864 619 aaPredicted RBP11.81□□□□□ -0.52
HDAC4-213ENST00000496347 IL18Q14116 193 aa11.81□□□□□ -0.52
HDAC4-213ENST00000496347 TRIM16LQ309B1 348 aa11.81□□□□□ -0.52
HDAC4-213ENST00000496347 Q56UQ5 140 aa11.81□□□□□ -0.52
HDAC4-213ENST00000496347 LINC00322Q6ZN03 302 aaPredicted RBP11.81□□□□□ -0.52
HDAC4-213ENST00000496347 UBAC2Q8NBM4 344 aa11.81□□□□□ -0.52
HDAC4-213ENST00000496347 DIRAS2Q96HU8 199 aa11.81□□□□□ -0.52
HDAC4-213ENST00000496347 C5orf66Q9H5L9 145 aa11.81□□□□□ -0.52
HDAC4-213ENST00000496347 SRD5A3Q9H8P0 318 aa11.81□□□□□ -0.52
HDAC4-213ENST00000496347 C15orf62A8K5M9 175 aa11.8□□□□□ -0.52
HDAC4-213ENST00000496347 DISC1C4P0D8 188 aa11.8□□□□□ -0.52
HDAC4-213ENST00000496347 H3BMQ9 156 aa11.8□□□□□ -0.52
HDAC4-213ENST00000496347 I3L2K1 104 aa11.8□□□□□ -0.52
HDAC4-213ENST00000496347 ERHP84090 104 aaKnown RBP11.8□□□□□ -0.52
HDAC4-213ENST00000496347 RBPMS2Q6ZRY4 209 aaKnown RBP11.8□□□□□ -0.52
HDAC4-213ENST00000496347 DEFB125Q8N687 156 aa11.8□□□□□ -0.52
HDAC4-213ENST00000496347 SLC35G3Q8N808 338 aa11.8□□□□□ -0.52
HDAC4-213ENST00000496347 OR52B4Q8NGK2 314 aa11.8□□□□□ -0.52
HDAC4-213ENST00000496347 MARCH1Q8TCQ1 289 aa11.8□□□□□ -0.52
HDAC4-213ENST00000496347 MISP3Q96FF7 219 aa11.8□□□□□ -0.52
HDAC4-213ENST00000496347 TXN2Q99757 166 aa11.8□□□□□ -0.52
HDAC4-213ENST00000496347 SPAG8Q99932 426 aaPredicted RBP11.8□□□□□ -0.52
HDAC4-213ENST00000496347 PRRT1Q99946 306 aa11.8□□□□□ -0.52
HDAC4-213ENST00000496347 CHRDL1Q9BU40 450 aa11.8□□□□□ -0.52
HDAC4-213ENST00000496347 PDCD10Q9BUL8 212 aa11.8□□□□□ -0.52
HDAC4-213ENST00000496347 C6orf62Q9GZU0 229 aaPredicted RBP11.8□□□□□ -0.52
HDAC4-213ENST00000496347 WFDC10AQ9H1F0 79 aa11.8□□□□□ -0.52
HDAC4-213ENST00000496347 EDA2RQ9HAV5 297 aa11.8□□□□□ -0.52
HDAC4-213ENST00000496347 C14orf166Q9Y224 244 aaKnown RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms