RNA–Protein interactions for RNA: ENST00000496342.1

RHBDD3-207, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-207ENST00000496342 C11orf87Q6NUJ2 197 aa13.36□□□□□ -0.27
RHBDD3-207ENST00000496342 ZNF502Q8TBZ5 544 aa13.36□□□□□ -0.27
RHBDD3-207ENST00000496342 SLC2A8Q9NY64 477 aa13.36□□□□□ -0.27
RHBDD3-207ENST00000496342 ZMAT5Q9UDW3 170 aaKnown RBP13.36□□□□□ -0.27
RHBDD3-207ENST00000496342 A0A0B4J293 547 aa13.35□□□□□ -0.27
RHBDD3-207ENST00000496342 CRYM-AS1A6NIL9 109 aa13.35□□□□□ -0.27
RHBDD3-207ENST00000496342 GGCTO75223 188 aaKnown RBP13.35□□□□□ -0.27
RHBDD3-207ENST00000496342 PRCDQ00LT1 54 aa13.35□□□□□ -0.27
RHBDD3-207ENST00000496342 SURF2Q15527 256 aaPredicted RBP13.35□□□□□ -0.27
RHBDD3-207ENST00000496342 GLYATL2Q8WU03 294 aa13.35□□□□□ -0.27
RHBDD3-207ENST00000496342 CACNG8Q8WXS5 425 aa13.35□□□□□ -0.27
RHBDD3-207ENST00000496342 TMEM56Q96MV1 263 aa13.35□□□□□ -0.27
RHBDD3-207ENST00000496342 SRRQ9GZT4 340 aa13.35□□□□□ -0.27
RHBDD3-207ENST00000496342 TMEM222Q9H0R3 208 aa13.35□□□□□ -0.27
RHBDD3-207ENST00000496342 FKBP11Q9NYL4 201 aa13.35□□□□□ -0.27
RHBDD3-207ENST00000496342 IZUMO1RA6ND01 250 aa13.34□□□□□ -0.27
RHBDD3-207ENST00000496342 ST8SIA3O43173 380 aa13.34□□□□□ -0.27
RHBDD3-207ENST00000496342 CLEC3BP05452 202 aa13.34□□□□□ -0.27
RHBDD3-207ENST00000496342 Q6ZRM9 215 aa13.34□□□□□ -0.27
RHBDD3-207ENST00000496342 HSD17B13Q7Z5P4 300 aaPredicted RBP13.34□□□□□ -0.27
RHBDD3-207ENST00000496342 TOMM5Q8N4H5 51 aa13.34□□□□□ -0.27
RHBDD3-207ENST00000496342 OR2C3Q8N628 320 aa13.34□□□□□ -0.27
RHBDD3-207ENST00000496342 RNASE11Q8TAA1 199 aaKnown RBP13.34□□□□□ -0.27
RHBDD3-207ENST00000496342 SCP2D1Q9UJQ7 156 aa13.34□□□□□ -0.27
RHBDD3-207ENST00000496342 K7EIM0 57 aa13.33□□□□□ -0.28
RHBDD3-207ENST00000496342 IGHV3-48P01763 117 aa13.33□□□□□ -0.28
RHBDD3-207ENST00000496342 HSPE1P61604 102 aaKnown RBP13.33□□□□□ -0.28
RHBDD3-207ENST00000496342 CD69Q07108 199 aa13.33□□□□□ -0.28
RHBDD3-207ENST00000496342 TATDN3Q17R31 274 aa13.33□□□□□ -0.28
RHBDD3-207ENST00000496342 SELENOHQ8IZQ5 122 aaKnown RBP13.33□□□□□ -0.28
RHBDD3-207ENST00000496342 CXorf58Q96LI9 332 aa13.33□□□□□ -0.28
RHBDD3-207ENST00000496342 B9D2Q9BPU9 175 aa13.33□□□□□ -0.28
RHBDD3-207ENST00000496342 PLEKHA3Q9HB20 300 aa13.33□□□□□ -0.28
RHBDD3-207ENST00000496342 TRBV7-1A0A0A6YYK4 115 aa13.32□□□□□ -0.28
RHBDD3-207ENST00000496342 OR2T8A6NH00 312 aa13.32□□□□□ -0.28
RHBDD3-207ENST00000496342 C2orf70A6NJV1 201 aa13.32□□□□□ -0.28
RHBDD3-207ENST00000496342 F8W735 103 aaPredicted RBP13.32□□□□□ -0.28
RHBDD3-207ENST00000496342 NXPH3O95157 252 aa13.32□□□□□ -0.28
RHBDD3-207ENST00000496342 CDS2O95674 445 aa13.32□□□□□ -0.28
RHBDD3-207ENST00000496342 AKR1C4P17516 323 aa13.32□□□□□ -0.28
RHBDD3-207ENST00000496342 TMEM268Q5VZI3 342 aa13.32□□□□□ -0.28
RHBDD3-207ENST00000496342 UNQ9165/PRO28630Q6UXU0 137 aa13.32□□□□□ -0.28
RHBDD3-207ENST00000496342 SLC35G3Q8N808 338 aa13.32□□□□□ -0.28
RHBDD3-207ENST00000496342 SCARB1Q8WTV0 552 aa13.32□□□□□ -0.28
RHBDD3-207ENST00000496342 MISP3Q96FF7 219 aa13.32□□□□□ -0.28
RHBDD3-207ENST00000496342 ASCL2Q99929 193 aa13.32□□□□□ -0.28
RHBDD3-207ENST00000496342 THYN1Q9P016 225 aa13.32□□□□□ -0.28
RHBDD3-207ENST00000496342 PEMTQ9UBM1 199 aa13.32□□□□□ -0.28
RHBDD3-207ENST00000496342 ZNF320A2RRD8 509 aa13.31□□□□□ -0.28
RHBDD3-207ENST00000496342 ETV6P41212 452 aa13.31□□□□□ -0.28
RHBDD3-207ENST00000496342 SUPT4H1P63272 117 aaKnown RBP13.31□□□□□ -0.28
RHBDD3-207ENST00000496342 TMEM187Q14656 261 aa13.31□□□□□ -0.28
RHBDD3-207ENST00000496342 BAK1Q16611 211 aa13.31□□□□□ -0.28
RHBDD3-207ENST00000496342 FAM209BQ5JX69 171 aa13.31□□□□□ -0.28
RHBDD3-207ENST00000496342 SPANXN2Q5MJ10 180 aa13.31□□□□□ -0.28
RHBDD3-207ENST00000496342 UBAC2Q8NBM4 344 aa13.31□□□□□ -0.28
RHBDD3-207ENST00000496342 VN1R17PQ8TDU5 208 aa13.31□□□□□ -0.28
RHBDD3-207ENST00000496342 RBPMSQ93062 196 aaKnown RBP13.31□□□□□ -0.28
RHBDD3-207ENST00000496342 GPR146Q96CH1 333 aa13.31□□□□□ -0.28
RHBDD3-207ENST00000496342 RRNAD1Q96FB5 475 aaKnown RBP13.31□□□□□ -0.28
RHBDD3-207ENST00000496342 SDHCQ99643 169 aaPredicted RBP13.31□□□□□ -0.28
RHBDD3-207ENST00000496342 DNAH9Q9NYC9 4486 aa13.3□□□□□ -0.28
RHBDD3-207ENST00000496342 IGHV3OR16-8A0A075B7F1 116 aa13.3□□□□□ -0.28
RHBDD3-207ENST00000496342 TMEM213A2RRL7 107 aa13.3□□□□□ -0.28
RHBDD3-207ENST00000496342 TGOLN2O43493 480 aa13.3□□□□□ -0.28
RHBDD3-207ENST00000496342 IFNA17P01571 189 aa13.3□□□□□ -0.28
RHBDD3-207ENST00000496342 FAUP35544 74 aaKnown RBP13.3□□□□□ -0.28
RHBDD3-207ENST00000496342 HOXA1P49639 335 aaPredicted RBP13.3□□□□□ -0.28
RHBDD3-207ENST00000496342 DHODHQ02127 395 aa13.3□□□□□ -0.28
RHBDD3-207ENST00000496342 ZNF57Q68EA5 555 aaPredicted RBP13.3□□□□□ -0.28
RHBDD3-207ENST00000496342 PLET1Q6UQ28 207 aa13.3□□□□□ -0.28
RHBDD3-207ENST00000496342 TMED4Q7Z7H5 227 aa13.3□□□□□ -0.28
RHBDD3-207ENST00000496342 GPHB5Q86YW7 130 aa13.3□□□□□ -0.28
RHBDD3-207ENST00000496342 SGPP2Q8IWX5 399 aa13.3□□□□□ -0.28
RHBDD3-207ENST00000496342 OR1P1Q8NH06 330 aa13.3□□□□□ -0.28
RHBDD3-207ENST00000496342 DYNLRB2Q8TF09 96 aa13.3□□□□□ -0.28
RHBDD3-207ENST00000496342 PINX1Q96BK5 328 aaKnown RBP13.3□□□□□ -0.28
RHBDD3-207ENST00000496342 CHRDL1Q9BU40 450 aa13.3□□□□□ -0.28
RHBDD3-207ENST00000496342 C21orf62Q9NYP8 219 aa13.3□□□□□ -0.28
RHBDD3-207ENST00000496342 CACNG5Q9UF02 275 aa13.3□□□□□ -0.28
RHBDD3-207ENST00000496342 SMAD5-AS1Q9Y6J3 95 aa13.3□□□□□ -0.28
RHBDD3-207ENST00000496342 LINC00854A0A1B0GVQ3 168 aa13.29□□□□□ -0.28
RHBDD3-207ENST00000496342 CYB5BO43169 146 aa13.29□□□□□ -0.28
RHBDD3-207ENST00000496342 B3GALNT1O75752 331 aa13.29□□□□□ -0.28
RHBDD3-207ENST00000496342 ATG12O94817 140 aa13.29□□□□□ -0.28
RHBDD3-207ENST00000496342 FOLR2P14207 255 aa13.29□□□□□ -0.28
RHBDD3-207ENST00000496342 AP3S2P59780 193 aa13.29□□□□□ -0.28
RHBDD3-207ENST00000496342 CD300EQ496F6 205 aaPredicted RBP13.29□□□□□ -0.28
RHBDD3-207ENST00000496342 TM4SF20Q53R12 229 aa13.29□□□□□ -0.28
RHBDD3-207ENST00000496342 Q56UQ5 140 aa13.29□□□□□ -0.28
RHBDD3-207ENST00000496342 ZNF114Q8NC26 417 aa13.29□□□□□ -0.28
RHBDD3-207ENST00000496342 ZNF414Q96IQ9 312 aa13.29□□□□□ -0.28
RHBDD3-207ENST00000496342 SIGLEC8Q9NYZ4 499 aa13.29□□□□□ -0.28
RHBDD3-207ENST00000496342 COL7A1Q02388 2944 aa13.28□□□□□ -0.28
RHBDD3-207ENST00000496342 I3L2K1 104 aa13.28□□□□□ -0.28
RHBDD3-207ENST00000496342 LGALS9O00182 355 aa13.28□□□□□ -0.28
RHBDD3-207ENST00000496342 MT-CO2P00403 227 aa13.28□□□□□ -0.28
RHBDD3-207ENST00000496342 ADMP35318 185 aa13.28□□□□□ -0.28
RHBDD3-207ENST00000496342 CCR6P51684 374 aa13.28□□□□□ -0.28
RHBDD3-207ENST00000496342 ERHP84090 104 aaKnown RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms