RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-209ENST00000495630 DAPK2Q9UIK4 370 aa12.82□□□□□ -0.36
TMEM53-209ENST00000495630 KIAA1109Q2LD37 5005 aa12.81□□□□□ -0.36
TMEM53-209ENST00000495630 DEFB4AO15263 64 aa12.81□□□□□ -0.36
TMEM53-209ENST00000495630 YIF1AO95070 293 aa12.81□□□□□ -0.36
TMEM53-209ENST00000495630 CA1P00915 261 aaPredicted RBP12.81□□□□□ -0.36
TMEM53-209ENST00000495630 FGF9P31371 208 aaPredicted RBP12.81□□□□□ -0.36
TMEM53-209ENST00000495630 FXYD4P59646 89 aa12.81□□□□□ -0.36
TMEM53-209ENST00000495630 AADACL3Q5VUY0 350 aa12.81□□□□□ -0.36
TMEM53-209ENST00000495630 TXN2Q99757 166 aa12.81□□□□□ -0.36
TMEM53-209ENST00000495630 HINT2Q9BX68 163 aa12.81□□□□□ -0.36
TMEM53-209ENST00000495630 RHBDL2Q9NX52 303 aa12.81□□□□□ -0.36
TMEM53-209ENST00000495630 OR51B2Q9Y5P1 312 aa12.81□□□□□ -0.36
TMEM53-209ENST00000495630 VPS13DQ5THJ4 4388 aa12.81□□□□□ -0.36
TMEM53-209ENST00000495630 IGKV3-7A0A075B6H7 116 aa12.8□□□□□ -0.36
TMEM53-209ENST00000495630 TRAV18A0A075B6X5 111 aa12.8□□□□□ -0.36
TMEM53-209ENST00000495630 MARCH11A6NNE9 402 aa12.8□□□□□ -0.36
TMEM53-209ENST00000495630 C15orf61A6NNL5 157 aa12.8□□□□□ -0.36
TMEM53-209ENST00000495630 SNAPC5O75971 98 aa12.8□□□□□ -0.36
TMEM53-209ENST00000495630 DFFBO76075 338 aa12.8□□□□□ -0.36
TMEM53-209ENST00000495630 GNRHRP30968 328 aa12.8□□□□□ -0.36
TMEM53-209ENST00000495630 MFAP4P55083 255 aa12.8□□□□□ -0.36
TMEM53-209ENST00000495630 GBGT1Q8N5D6 347 aa12.8□□□□□ -0.36
TMEM53-209ENST00000495630 OR1P1Q8NH06 330 aa12.8□□□□□ -0.36
TMEM53-209ENST00000495630 ZNF414Q96IQ9 312 aa12.8□□□□□ -0.36
TMEM53-209ENST00000495630 TMEM56Q96MV1 263 aa12.8□□□□□ -0.36
TMEM53-209ENST00000495630 FKBP11Q9NYL4 201 aa12.8□□□□□ -0.36
TMEM53-209ENST00000495630 IGHV3-49A0A0A0MS15 119 aa12.79□□□□□ -0.36
TMEM53-209ENST00000495630 F2RP25116 425 aa12.79□□□□□ -0.36
TMEM53-209ENST00000495630 OR5AP2Q8NGF4 316 aa12.79□□□□□ -0.36
TMEM53-209ENST00000495630 TXNL4BQ9NX01 149 aaKnown RBP12.79□□□□□ -0.36
TMEM53-209ENST00000495630 BLOC1S6Q9UL45 172 aa12.79□□□□□ -0.36
TMEM53-209ENST00000495630 RRP15Q9Y3B9 282 aaKnown RBP12.79□□□□□ -0.36
TMEM53-209ENST00000495630 PGLYRP1O75594 196 aaPredicted RBP12.78□□□□□ -0.36
TMEM53-209ENST00000495630 KRASP01116 189 aa12.78□□□□□ -0.36
TMEM53-209ENST00000495630 SCAND1P57086 179 aa12.78□□□□□ -0.36
TMEM53-209ENST00000495630 DHRS11Q6UWP2 260 aa12.78□□□□□ -0.36
TMEM53-209ENST00000495630 TCF24Q7RTU0 167 aa12.78□□□□□ -0.36
TMEM53-209ENST00000495630 LGALS14Q8TCE9 139 aa12.78□□□□□ -0.36
TMEM53-209ENST00000495630 NRG4Q8WWG1 115 aa12.78□□□□□ -0.36
TMEM53-209ENST00000495630 NXF2Q9GZY0 626 aaKnown RBP12.78□□□□□ -0.36
TMEM53-209ENST00000495630 PRNDQ9UKY0 176 aa12.78□□□□□ -0.36
TMEM53-209ENST00000495630 NSG2Q9Y328 171 aa12.78□□□□□ -0.36
TMEM53-209ENST00000495630 A0A0A6YYH2 397 aa12.77□□□□□ -0.37
TMEM53-209ENST00000495630 A6NJ64 397 aa12.77□□□□□ -0.37
TMEM53-209ENST00000495630 I3L2K1 104 aa12.77□□□□□ -0.37
TMEM53-209ENST00000495630 XRCC3O43542 346 aa12.77□□□□□ -0.37
TMEM53-209ENST00000495630 MED14OSP0DP75 135 aa12.77□□□□□ -0.37
TMEM53-209ENST00000495630 LPAR6P43657 344 aa12.77□□□□□ -0.37
TMEM53-209ENST00000495630 CBX5P45973 191 aa12.77□□□□□ -0.37
TMEM53-209ENST00000495630 SFXN4Q6P4A7 337 aa12.77□□□□□ -0.37
TMEM53-209ENST00000495630 TMEM17Q86X19 198 aa12.77□□□□□ -0.37
TMEM53-209ENST00000495630 Q8NAQ8 132 aa12.77□□□□□ -0.37
TMEM53-209ENST00000495630 DUSP18Q8NEJ0 188 aa12.77□□□□□ -0.37
TMEM53-209ENST00000495630 SLC25A46Q96AG3 418 aa12.77□□□□□ -0.37
TMEM53-209ENST00000495630 IGHV3OR16-13A0A075B7E8 117 aa12.76□□□□□ -0.37
TMEM53-209ENST00000495630 IGHV3-74A0A0B4J1X5 117 aa12.76□□□□□ -0.37
TMEM53-209ENST00000495630 TRAV2A0A0B4J234 112 aa12.76□□□□□ -0.37
TMEM53-209ENST00000495630 DNASE2O00115 360 aaPredicted RBP12.76□□□□□ -0.37
TMEM53-209ENST00000495630 EIF4EP06730 217 aaKnown RBP12.76□□□□□ -0.37
TMEM53-209ENST00000495630 DEFB131AP59861 70 aa12.76□□□□□ -0.37
TMEM53-209ENST00000495630 HERV-K104P61576 105 aa12.76□□□□□ -0.37
TMEM53-209ENST00000495630 TMEM41BQ5BJD5 291 aa12.76□□□□□ -0.37
TMEM53-209ENST00000495630 FCAMRQ8WWV6 532 aa12.76□□□□□ -0.37
TMEM53-209ENST00000495630 MISP3Q96FF7 219 aa12.76□□□□□ -0.37
TMEM53-209ENST00000495630 GINS3Q9BRX5 216 aa12.76□□□□□ -0.37
TMEM53-209ENST00000495630 VSIRQ9H7M9 311 aa12.76□□□□□ -0.37
TMEM53-209ENST00000495630 AUNIPQ9H7T9 357 aa12.76□□□□□ -0.37
TMEM53-209ENST00000495630 DIABLOQ9NR28 239 aa12.76□□□□□ -0.37
TMEM53-209ENST00000495630 TMEM14BQ9NUH8 114 aa12.76□□□□□ -0.37
TMEM53-209ENST00000495630 TRAV10A0A0B4J240 114 aa12.75□□□□□ -0.37
TMEM53-209ENST00000495630 A0A1B0GVY2 172 aa12.75□□□□□ -0.37
TMEM53-209ENST00000495630 FCER2P06734 321 aa12.75□□□□□ -0.37
TMEM53-209ENST00000495630 RBMY1A1P0DJD3 496 aaKnown RBP12.75□□□□□ -0.37
TMEM53-209ENST00000495630 RBMY1CP0DJD4 496 aa12.75□□□□□ -0.37
TMEM53-209ENST00000495630 HLA-DMBP28068 263 aa12.75□□□□□ -0.37
TMEM53-209ENST00000495630 G6PCP35575 357 aa12.75□□□□□ -0.37
TMEM53-209ENST00000495630 RBMY1FQ15415 496 aaKnown RBP12.75□□□□□ -0.37
TMEM53-209ENST00000495630 STHQ8IWL8 128 aa12.75□□□□□ -0.37
TMEM53-209ENST00000495630 CENPSQ8N2Z9 138 aa12.75□□□□□ -0.37
TMEM53-209ENST00000495630 TSPAN14Q8NG11 270 aa12.75□□□□□ -0.37
TMEM53-209ENST00000495630 SLC25A38Q96DW6 304 aa12.75□□□□□ -0.37
TMEM53-209ENST00000495630 TSC22D3Q99576 134 aa12.75□□□□□ -0.37
TMEM53-209ENST00000495630 MS4A6AQ9H2W1 248 aa12.75□□□□□ -0.37
TMEM53-209ENST00000495630 SSR3Q9UNL2 185 aa12.75□□□□□ -0.37
TMEM53-209ENST00000495630 ST8SIA3O43173 380 aa12.74□□□□□ -0.37
TMEM53-209ENST00000495630 GNG7O60262 68 aa12.74□□□□□ -0.37
TMEM53-209ENST00000495630 RLN1P04808 185 aa12.74□□□□□ -0.37
TMEM53-209ENST00000495630 MIFP14174 115 aa12.74□□□□□ -0.37
TMEM53-209ENST00000495630 UBE2UQ5VVX9 321 aa12.74□□□□□ -0.37
TMEM53-209ENST00000495630 LEMD1Q68G75 181 aa12.74□□□□□ -0.37
TMEM53-209ENST00000495630 TOMM20LQ6UXN7 152 aa12.74□□□□□ -0.37
TMEM53-209ENST00000495630 CMTM1Q8IZ96 169 aa12.74□□□□□ -0.37
TMEM53-209ENST00000495630 LILRB2Q8N423 598 aa12.74□□□□□ -0.37
TMEM53-209ENST00000495630 OR5H6Q8NGV6 325 aa12.74□□□□□ -0.37
TMEM53-209ENST00000495630 DNAH6Q9C0G6 4158 aa12.74□□□□□ -0.37
TMEM53-209ENST00000495630 IGHV4-4A0A075B6R2 117 aa12.73□□□□□ -0.37
TMEM53-209ENST00000495630 IGHV4-28A0A0C4DH34 117 aa12.73□□□□□ -0.37
TMEM53-209ENST00000495630 MT-CO2P00403 227 aa12.73□□□□□ -0.37
TMEM53-209ENST00000495630 GIG44P09565 113 aaPredicted RBP12.73□□□□□ -0.37
TMEM53-209ENST00000495630 SDC2P34741 201 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms