RNA–Protein interactions for RNA: ENST00000495426.1

BBS9-213, Transcript of Bardet-Biedl syndrome 9, human

TSL 3

Gene BBS9, Length 481 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS9-213	ENST00000495426	C20orf24	Q9BUV8	137 aa		5.23	□□□□□ -1.57
BBS9-213	ENST00000495426	SMPD3	Q9NY59	655 aa	Predicted RBP	5.23	□□□□□ -1.57
BBS9-213	ENST00000495426	IGHV3OR16-8	A0A075B7F1	116 aa		5.22	□□□□□ -1.57
BBS9-213	ENST00000495426	OR2T8	A6NH00	312 aa		5.22	□□□□□ -1.57
BBS9-213	ENST00000495426	CGB1	A6NKQ9	187 aa		5.22	□□□□□ -1.57
BBS9-213	ENST00000495426		M0R2N4	97 aa		5.22	□□□□□ -1.57
BBS9-213	ENST00000495426	ZNF207	O43670	478 aa	Known RBP	5.22	□□□□□ -1.57
BBS9-213	ENST00000495426	UCHL1	P09936	223 aa		5.22	□□□□□ -1.57
BBS9-213	ENST00000495426	CD37	P11049	281 aa		5.22	□□□□□ -1.57
BBS9-213	ENST00000495426	RPL30	P62888	115 aa	Known RBP	5.22	□□□□□ -1.57
BBS9-213	ENST00000495426	RPL8	P62917	257 aa	Known RBP	5.22	□□□□□ -1.57
BBS9-213	ENST00000495426	TMEM187	Q14656	261 aa		5.22	□□□□□ -1.57
BBS9-213	ENST00000495426		Q6ZTC4	211 aa		5.22	□□□□□ -1.57
BBS9-213	ENST00000495426	AHSA2	Q719I0	299 aa		5.22	□□□□□ -1.57
BBS9-213	ENST00000495426	MS4A15	Q8N5U1	240 aa		5.22	□□□□□ -1.57
BBS9-213	ENST00000495426		Q8NAQ8	132 aa		5.22	□□□□□ -1.57
BBS9-213	ENST00000495426	TCTEX1D2	Q8WW35	142 aa		5.22	□□□□□ -1.57
BBS9-213	ENST00000495426	CYGB	Q8WWM9	190 aa		5.22	□□□□□ -1.57
BBS9-213	ENST00000495426	RAB3C	Q96E17	227 aa		5.22	□□□□□ -1.57
BBS9-213	ENST00000495426	C11orf21	Q9P2W6	132 aa		5.22	□□□□□ -1.57
BBS9-213	ENST00000495426	KCNK7	Q9Y2U2	307 aa		5.22	□□□□□ -1.57
BBS9-213	ENST00000495426	RBMX2	Q9Y388	322 aa	Known RBP	5.22	□□□□□ -1.57
BBS9-213	ENST00000495426	DMBT1	Q9UGM3	2413 aa	Predicted RBP	5.22	□□□□□ -1.57
BBS9-213	ENST00000495426	IGKV3-7	A0A075B6H7	116 aa		5.21	□□□□□ -1.58
BBS9-213	ENST00000495426		A0A075B6Q4	140 aa		5.21	□□□□□ -1.58
BBS9-213	ENST00000495426	IGKV1D-8	A0A087WSZ0	117 aa		5.21	□□□□□ -1.58
BBS9-213	ENST00000495426	TRAV10	A0A0B4J240	114 aa		5.21	□□□□□ -1.58
BBS9-213	ENST00000495426	TMEM272	A0A1B0GTI8	110 aa		5.21	□□□□□ -1.58
BBS9-213	ENST00000495426	IGLC7	A0M8Q6	106 aa		5.21	□□□□□ -1.58
BBS9-213	ENST00000495426		J3KRW8	73 aa		5.21	□□□□□ -1.58
BBS9-213	ENST00000495426	NDUFA4	O00483	81 aa		5.21	□□□□□ -1.58
BBS9-213	ENST00000495426	MFNG	O00587	321 aa		5.21	□□□□□ -1.58
BBS9-213	ENST00000495426	DENR	O43583	198 aa	Known RBP	5.21	□□□□□ -1.58
BBS9-213	ENST00000495426	ATP5H	O75947	161 aa		5.21	□□□□□ -1.58
BBS9-213	ENST00000495426	AMBP	P02760	352 aa		5.21	□□□□□ -1.58
BBS9-213	ENST00000495426	HLA-G	P17693	338 aa		5.21	□□□□□ -1.58
BBS9-213	ENST00000495426	PTBP1	P26599	531 aa	Known RBP eCLIP	5.21	□□□□□ -1.58
BBS9-213	ENST00000495426	HLA-DMB	P28068	263 aa		5.21	□□□□□ -1.58
BBS9-213	ENST00000495426	TFPI2	P48307	235 aa		5.21	□□□□□ -1.58
BBS9-213	ENST00000495426	PLA2G7	Q13093	441 aa		5.21	□□□□□ -1.58
BBS9-213	ENST00000495426	IRF3	Q14653	427 aa		5.21	□□□□□ -1.58
BBS9-213	ENST00000495426	TIMM50	Q3ZCQ8	353 aa		5.21	□□□□□ -1.58
BBS9-213	ENST00000495426	PVRIG	Q6DKI7	326 aa		5.21	□□□□□ -1.58
BBS9-213	ENST00000495426	NR2C2AP	Q86WQ0	139 aa		5.21	□□□□□ -1.58
BBS9-213	ENST00000495426	NANOGP1	Q8N7R0	232 aa		5.21	□□□□□ -1.58
BBS9-213	ENST00000495426	FAM3D	Q96BQ1	224 aa		5.21	□□□□□ -1.58
BBS9-213	ENST00000495426	BSCL2	Q96G97	398 aa	Predicted RBP	5.21	□□□□□ -1.58
BBS9-213	ENST00000495426	HSD17B10	Q99714	261 aa	Known RBP	5.21	□□□□□ -1.58
BBS9-213	ENST00000495426	RNF126	Q9BV68	326 aa		5.21	□□□□□ -1.58
BBS9-213	ENST00000495426	HRH4	Q9H3N8	390 aa		5.21	□□□□□ -1.58
BBS9-213	ENST00000495426	THYN1	Q9P016	225 aa		5.21	□□□□□ -1.58
BBS9-213	ENST00000495426	SPATA2	Q9UM82	520 aa		5.21	□□□□□ -1.58
BBS9-213	ENST00000495426	AK6	Q9Y3D8	172 aa	Known RBP	5.21	□□□□□ -1.58
BBS9-213	ENST00000495426	IGHV3-21	A0A0B4J1V1	117 aa		5.2	□□□□□ -1.58
BBS9-213	ENST00000495426	IGKV1D-13	A0A0B4J2D9	117 aa		5.2	□□□□□ -1.58
BBS9-213	ENST00000495426	IGHV4-28	A0A0C4DH34	117 aa		5.2	□□□□□ -1.58
BBS9-213	ENST00000495426	MRPS14	O60783	128 aa	Known RBP	5.2	□□□□□ -1.58
BBS9-213	ENST00000495426	HRAS	P01112	189 aa		5.2	□□□□□ -1.58
BBS9-213	ENST00000495426		P0DMU3	169 aa		5.2	□□□□□ -1.58
BBS9-213	ENST00000495426	FAM231A	P0DMU4	169 aa		5.2	□□□□□ -1.58
BBS9-213	ENST00000495426	FAM231C	P0DMU5	169 aa		5.2	□□□□□ -1.58
BBS9-213	ENST00000495426	IGKV1-13	P0DP09	117 aa		5.2	□□□□□ -1.58
BBS9-213	ENST00000495426	HIST1H1D	P16402	221 aa	Known RBP	5.2	□□□□□ -1.58
BBS9-213	ENST00000495426	GNB3	P16520	340 aa		5.2	□□□□□ -1.58
BBS9-213	ENST00000495426	NFYA	P23511	347 aa	Predicted RBP	5.2	□□□□□ -1.58
BBS9-213	ENST00000495426	GADD45A	P24522	165 aa		5.2	□□□□□ -1.58
BBS9-213	ENST00000495426	OR2B8P	P59922	312 aa		5.2	□□□□□ -1.58
BBS9-213	ENST00000495426	POM121L12	Q8N7R1	296 aa		5.2	□□□□□ -1.58
BBS9-213	ENST00000495426	VN1R17P	Q8TDU5	208 aa		5.2	□□□□□ -1.58
BBS9-213	ENST00000495426	RNF2	Q99496	336 aa		5.2	□□□□□ -1.58
BBS9-213	ENST00000495426	CHRDL1	Q9BU40	450 aa		5.2	□□□□□ -1.58
BBS9-213	ENST00000495426	MND1	Q9BWT6	205 aa		5.2	□□□□□ -1.58
BBS9-213	ENST00000495426	QTRT1	Q9BXR0	403 aa	Known RBP	5.2	□□□□□ -1.58
BBS9-213	ENST00000495426	HRASLS	Q9HDD0	168 aa		5.2	□□□□□ -1.58
BBS9-213	ENST00000495426	BET1L	Q9NYM9	111 aa		5.2	□□□□□ -1.58
BBS9-213	ENST00000495426	TAS2R8	Q9NYW2	309 aa		5.2	□□□□□ -1.58
BBS9-213	ENST00000495426	PSORS1C1	Q9UIG5	152 aa		5.2	□□□□□ -1.58
BBS9-213	ENST00000495426	OR2W1	Q9Y3N9	320 aa		5.2	□□□□□ -1.58
BBS9-213	ENST00000495426	DNAH5	Q8TE73	4624 aa		5.2	□□□□□ -1.58
BBS9-213	ENST00000495426	IGHV3-49	A0A0A0MS15	119 aa		5.19	□□□□□ -1.58
BBS9-213	ENST00000495426	C15orf61	A6NNL5	157 aa		5.19	□□□□□ -1.58
BBS9-213	ENST00000495426	C15orf62	A8K5M9	175 aa		5.19	□□□□□ -1.58
BBS9-213	ENST00000495426		K7EMT4	169 aa		5.19	□□□□□ -1.58
BBS9-213	ENST00000495426	CYB5B	O43169	146 aa		5.19	□□□□□ -1.58
BBS9-213	ENST00000495426	SLC22A5	O76082	557 aa		5.19	□□□□□ -1.58
BBS9-213	ENST00000495426	HLA-DQB1	P01920	261 aa		5.19	□□□□□ -1.58
BBS9-213	ENST00000495426	RBMY1A1	P0DJD3	496 aa	Known RBP	5.19	□□□□□ -1.58
BBS9-213	ENST00000495426	RBMY1C	P0DJD4	496 aa		5.19	□□□□□ -1.58
BBS9-213	ENST00000495426	TALDO1	P37837	337 aa		5.19	□□□□□ -1.58
BBS9-213	ENST00000495426	CMC4	P56277	68 aa	Predicted RBP	5.19	□□□□□ -1.58
BBS9-213	ENST00000495426	BRWD1-AS2	P59051	145 aa		5.19	□□□□□ -1.58
BBS9-213	ENST00000495426	RPP30	P78346	268 aa	Known RBP	5.19	□□□□□ -1.58
BBS9-213	ENST00000495426	EIF4EBP1	Q13541	118 aa	Predicted RBP	5.19	□□□□□ -1.58
BBS9-213	ENST00000495426	RBMY1F	Q15415	496 aa	Known RBP	5.19	□□□□□ -1.58
BBS9-213	ENST00000495426	SSX1	Q16384	188 aa		5.19	□□□□□ -1.58
BBS9-213	ENST00000495426	C2orf76	Q3KRA6	126 aa		5.19	□□□□□ -1.58
BBS9-213	ENST00000495426	HES5	Q5TA89	166 aa		5.19	□□□□□ -1.58
BBS9-213	ENST00000495426	SPSB3	Q6PJ21	355 aa		5.19	□□□□□ -1.58
BBS9-213	ENST00000495426		Q6ZS49	121 aa		5.19	□□□□□ -1.58
BBS9-213	ENST00000495426	CENPS	Q8N2Z9	138 aa		5.19	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 55 ms