RNA–Protein interactions for RNA: ENST00000494815.1

TSPAN4-212, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,187 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-212ENST00000494815 LHX4Q969G2 390 aa15.09■□□□□ 0.01
TSPAN4-212ENST00000494815 OR4C12Q96R67 309 aa15.09■□□□□ 0.01
TSPAN4-212ENST00000494815 NDUFAF3Q9BU61 184 aa15.09■□□□□ 0.01
TSPAN4-212ENST00000494815 SLC39A9Q9NUM3 307 aa15.09■□□□□ 0.01
TSPAN4-212ENST00000494815 TIMM9Q9Y5J7 89 aa15.09■□□□□ 0.01
TSPAN4-212ENST00000494815 LRBAP50851 2863 aa15.09■□□□□ 0.01
TSPAN4-212ENST00000494815 MALRD1Q5VYJ5 2156 aa15.09■□□□□ 0.01
TSPAN4-212ENST00000494815 XKRY2A2RUG3 117 aa15.09■□□□□ 0.01
TSPAN4-212ENST00000494815 J3QR06 171 aa15.09■□□□□ 0.01
TSPAN4-212ENST00000494815 GCGP01275 180 aa15.09■□□□□ 0.01
TSPAN4-212ENST00000494815 RBP4P02753 201 aa15.09■□□□□ 0.01
TSPAN4-212ENST00000494815 GALR1P47211 349 aa15.09■□□□□ 0.01
TSPAN4-212ENST00000494815 RPL23P62829 140 aaKnown RBP15.09■□□□□ 0.01
TSPAN4-212ENST00000494815 ZNF664Q8N3J9 261 aa15.09■□□□□ 0.01
TSPAN4-212ENST00000494815 C11orf42Q8N5U0 333 aa15.09■□□□□ 0.01
TSPAN4-212ENST00000494815 ACY3Q96HD9 319 aa15.09■□□□□ 0.01
TSPAN4-212ENST00000494815 CIB3Q96Q77 187 aaPredicted RBP15.09■□□□□ 0.01
TSPAN4-212ENST00000494815 OR5B12Q96R08 314 aa15.09■□□□□ 0.01
TSPAN4-212ENST00000494815 PPP5D1E7EU14 171 aa15.08■□□□□ 0.01
TSPAN4-212ENST00000494815 TMEM250H0YL14 139 aa15.08■□□□□ 0.01
TSPAN4-212ENST00000494815 H7BYZ3 331 aa15.08■□□□□ 0.01
TSPAN4-212ENST00000494815 RBMXL2O75526 392 aaKnown RBP15.08■□□□□ 0.01
TSPAN4-212ENST00000494815 CT45A6P0DMU7 189 aa15.08■□□□□ 0.01
TSPAN4-212ENST00000494815 CT45A5P0DMU8 189 aa15.08■□□□□ 0.01
TSPAN4-212ENST00000494815 CT45A7P0DMV0 189 aa15.08■□□□□ 0.01
TSPAN4-212ENST00000494815 PDLIM4P50479 330 aa15.08■□□□□ 0.01
TSPAN4-212ENST00000494815 NECAP1Q8NC96 275 aa15.08■□□□□ 0.01
TSPAN4-212ENST00000494815 BEND2Q8NDZ0 799 aa15.08■□□□□ 0.01
TSPAN4-212ENST00000494815 OR9G1Q8NH87 305 aa15.08■□□□□ 0.01
TSPAN4-212ENST00000494815 UBE2L5PA0A1B0GUS4 154 aa15.08■□□□□ 0
TSPAN4-212ENST00000494815 FAM3BP58499 235 aaPredicted RBP15.08■□□□□ 0
TSPAN4-212ENST00000494815 POU2AF1Q16633 256 aa15.08■□□□□ 0
TSPAN4-212ENST00000494815 RTL8BQ17RB0 113 aa15.08■□□□□ 0
TSPAN4-212ENST00000494815 RPP25LQ8N5L8 163 aaKnown RBP15.08■□□□□ 0
TSPAN4-212ENST00000494815 OR10X1Q8NGY0 326 aa15.08■□□□□ 0
TSPAN4-212ENST00000494815 DTD1Q8TEA8 209 aa15.08■□□□□ 0
TSPAN4-212ENST00000494815 TMEM170AQ8WVE7 144 aa15.08■□□□□ 0
TSPAN4-212ENST00000494815 ZNRD1Q9P1U0 126 aa15.08■□□□□ 0
TSPAN4-212ENST00000494815 DOPEY1Q5JWR5 2465 aa15.08■□□□□ 0
TSPAN4-212ENST00000494815 OR9G9P0C7N8 305 aa15.07■□□□□ 0
TSPAN4-212ENST00000494815 ZNF137PP52743 207 aa15.07■□□□□ 0
TSPAN4-212ENST00000494815 RPP30P78346 268 aaKnown RBP15.07■□□□□ 0
TSPAN4-212ENST00000494815 SLC38A11Q08AI6 406 aa15.07■□□□□ 0
TSPAN4-212ENST00000494815 SPANXN5Q5MJ07 72 aa15.07■□□□□ 0
TSPAN4-212ENST00000494815 TNFRSF14Q92956 283 aa15.07■□□□□ 0
TSPAN4-212ENST00000494815 TMEM186Q96B77 213 aa15.07■□□□□ 0
TSPAN4-212ENST00000494815 RPUSD4Q96CM3 377 aaKnown RBP15.07■□□□□ 0
TSPAN4-212ENST00000494815 TMEM133Q9H2Q1 129 aa15.07■□□□□ 0
TSPAN4-212ENST00000494815 TMEM140Q9NV12 185 aa15.07■□□□□ 0
TSPAN4-212ENST00000494815 DOCK11Q5JSL3 2073 aa15.07■□□□□ 0
TSPAN4-212ENST00000494815 HRASP01112 189 aa15.07■□□□□ 0
TSPAN4-212ENST00000494815 IGKV1D-33P01593 117 aa15.07■□□□□ 0
TSPAN4-212ENST00000494815 IGKV1-33P01594 117 aa15.07■□□□□ 0
TSPAN4-212ENST00000494815 PSMB3P49720 205 aa15.07■□□□□ 0
TSPAN4-212ENST00000494815 OR4A16Q8NH70 328 aa15.07■□□□□ 0
TSPAN4-212ENST00000494815 PPIAL4CA0A0B4J2A2 164 aa15.06■□□□□ 0
TSPAN4-212ENST00000494815 PPIAL4GP0DN37 164 aa15.06■□□□□ 0
TSPAN4-212ENST00000494815 CDKN1AP38936 164 aa15.06■□□□□ 0
TSPAN4-212ENST00000494815 ABHD12Q8N2K0 398 aa15.06■□□□□ 0
TSPAN4-212ENST00000494815 OR52E5Q8NH55 327 aa15.06■□□□□ 0
TSPAN4-212ENST00000494815 PARLQ9H300 379 aa15.06■□□□□ 0
TSPAN4-212ENST00000494815 PATZ1Q9HBE1 687 aaKnown RBP15.06■□□□□ 0
TSPAN4-212ENST00000494815 SLC35D1Q9NTN3 355 aa15.06■□□□□ 0
TSPAN4-212ENST00000494815 ZFYVE26Q68DK2 2539 aa15.06■□□□□ 0
TSPAN4-212ENST00000494815 PDLIM3Q53GG5 364 aaPredicted RBP15.05■□□□□ 0
TSPAN4-212ENST00000494815 TMEM14EPQ6UXP3 125 aa15.05■□□□□ 0
TSPAN4-212ENST00000494815 VKORC1L1Q8N0U8 176 aa15.05■□□□□ 0
TSPAN4-212ENST00000494815 ANAPC16Q96DE5 110 aa15.05■□□□□ 0
TSPAN4-212ENST00000494815 BBC3Q96PG8 261 aaPredicted RBP15.05■□□□□ 0
TSPAN4-212ENST00000494815 QTRT1Q9BXR0 403 aaKnown RBP15.05■□□□□ 0
TSPAN4-212ENST00000494815 CTXND1A0A1B0GTU2 59 aa15.05■□□□□ -0
TSPAN4-212ENST00000494815 APOA2P02652 100 aa15.05■□□□□ -0
TSPAN4-212ENST00000494815 ZNF25P17030 456 aaPredicted RBP15.05■□□□□ -0
TSPAN4-212ENST00000494815 EFNA4P52798 201 aa15.05■□□□□ -0
TSPAN4-212ENST00000494815 RELBQ01201 579 aa15.05■□□□□ -0
TSPAN4-212ENST00000494815 ACTL10Q5JWF8 245 aa15.05■□□□□ -0
TSPAN4-212ENST00000494815 LY6G5BQ8NDX9 201 aa15.05■□□□□ -0
TSPAN4-212ENST00000494815 OR5AN1Q8NGI8 311 aa15.05■□□□□ -0
TSPAN4-212ENST00000494815 ST6GALNAC6Q969X2 333 aa15.05■□□□□ -0
TSPAN4-212ENST00000494815 PCGF1Q9BSM1 259 aa15.05■□□□□ -0
TSPAN4-212ENST00000494815 MRPL20Q9BYC9 149 aaKnown RBP15.05■□□□□ -0
TSPAN4-212ENST00000494815 MANBALQ9NQG1 85 aa15.05■□□□□ -0
TSPAN4-212ENST00000494815 ACSM6Q6P461 480 aa15.04■□□□□ -0
TSPAN4-212ENST00000494815 ELOVL1Q9BW60 279 aa15.04■□□□□ -0
TSPAN4-212ENST00000494815 GOLT1BQ9Y3E0 138 aa15.04■□□□□ -0
TSPAN4-212ENST00000494815 ZNF705GA8MUZ8 300 aaPredicted RBP15.04■□□□□ -0
TSPAN4-212ENST00000494815 GGCTO75223 188 aaKnown RBP15.04■□□□□ -0
TSPAN4-212ENST00000494815 LIPFP07098 398 aa15.04■□□□□ -0
TSPAN4-212ENST00000494815 IL3RAP26951 378 aa15.04■□□□□ -0
TSPAN4-212ENST00000494815 GNB2P62879 340 aa15.04■□□□□ -0
TSPAN4-212ENST00000494815 ACOT6Q3I5F7 207 aaPredicted RBP15.04■□□□□ -0
TSPAN4-212ENST00000494815 OR4A47Q6IF82 309 aa15.04■□□□□ -0
TSPAN4-212ENST00000494815 A0A1W2PPQ1 181 aa15.03■□□□□ -0
TSPAN4-212ENST00000494815 TYMSP04818 313 aa15.03■□□□□ -0
TSPAN4-212ENST00000494815 GPR6P46095 362 aaPredicted RBP15.03■□□□□ -0
TSPAN4-212ENST00000494815 OR8G2PQ6IF36 304 aa15.03■□□□□ -0
TSPAN4-212ENST00000494815 OSR1Q8TAX0 266 aaPredicted RBP15.03■□□□□ -0
TSPAN4-212ENST00000494815 ZDHHC16Q969W1 377 aa15.03■□□□□ -0
TSPAN4-212ENST00000494815 TMEM18Q96B42 140 aa15.03■□□□□ -0
TSPAN4-212ENST00000494815 SLC25A22Q9H936 323 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms