RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 MAPK3P27361 379 aaPredicted RBP3.82□□□□□ -1.8
PTCD3-219ENST00000494323 KRTAP10-6P60371 365 aaPredicted RBP3.82□□□□□ -1.8
PTCD3-219ENST00000494323 QRFPP83859 136 aa3.82□□□□□ -1.8
PTCD3-219ENST00000494323 ZNF45Q02386 682 aa3.82□□□□□ -1.8
PTCD3-219ENST00000494323 P2RY14Q15391 338 aa3.82□□□□□ -1.8
PTCD3-219ENST00000494323 TNXAQ16473 311 aa3.82□□□□□ -1.8
PTCD3-219ENST00000494323 MRGPRG-AS1Q2M3A8 158 aa3.82□□□□□ -1.8
PTCD3-219ENST00000494323 ACSM3Q53FZ2 586 aa3.82□□□□□ -1.8
PTCD3-219ENST00000494323 GLT8D1Q68CQ7 371 aa3.82□□□□□ -1.8
PTCD3-219ENST00000494323 CD164L2Q6UWJ8 174 aa3.82□□□□□ -1.8
PTCD3-219ENST00000494323 IDO2Q6ZQW0 420 aa3.82□□□□□ -1.8
PTCD3-219ENST00000494323 LRRTM1Q86UE6 522 aa3.82□□□□□ -1.8
PTCD3-219ENST00000494323 PDPNQ86YL7 162 aa3.82□□□□□ -1.8
PTCD3-219ENST00000494323 ADAD2Q8NCV1 583 aaKnown RBP3.82□□□□□ -1.8
PTCD3-219ENST00000494323 OR4A16Q8NH70 328 aa3.82□□□□□ -1.8
PTCD3-219ENST00000494323 KCNG3Q8TAE7 436 aa3.82□□□□□ -1.8
PTCD3-219ENST00000494323 DYNLRB2Q8TF09 96 aa3.82□□□□□ -1.8
PTCD3-219ENST00000494323 CYGBQ8WWM9 190 aa3.82□□□□□ -1.8
PTCD3-219ENST00000494323 CACNG8Q8WXS5 425 aa3.82□□□□□ -1.8
PTCD3-219ENST00000494323 PTX4Q96A99 478 aa3.82□□□□□ -1.8
PTCD3-219ENST00000494323 TMEM59Q9BXS4 323 aa3.82□□□□□ -1.8
PTCD3-219ENST00000494323 SDHAF2Q9NX18 166 aa3.82□□□□□ -1.8
PTCD3-219ENST00000494323 GHRLQ9UBU3 117 aa3.82□□□□□ -1.8
PTCD3-219ENST00000494323 ZNF230Q9UIE0 474 aaPredicted RBP3.82□□□□□ -1.8
PTCD3-219ENST00000494323 RRP15Q9Y3B9 282 aaKnown RBP3.82□□□□□ -1.8
PTCD3-219ENST00000494323 STRAPQ9Y3F4 350 aaKnown RBP3.82□□□□□ -1.8
PTCD3-219ENST00000494323 S4R3C0 116 aa3.82□□□□□ -1.8
PTCD3-219ENST00000494323 FRAS1Q86XX4 4008 aa3.81□□□□□ -1.8
PTCD3-219ENST00000494323 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.81□□□□□ -1.8
PTCD3-219ENST00000494323 TRBV6-6A0A0A6YYG2 114 aa3.81□□□□□ -1.8
PTCD3-219ENST00000494323 IRGMA1A4Y4 181 aa3.81□□□□□ -1.8
PTCD3-219ENST00000494323 C2orf70A6NJV1 201 aa3.81□□□□□ -1.8
PTCD3-219ENST00000494323 TRDCB7Z8K6 153 aa3.81□□□□□ -1.8
PTCD3-219ENST00000494323 J3QRK9 145 aa3.81□□□□□ -1.8
PTCD3-219ENST00000494323 BET1O15155 118 aa3.81□□□□□ -1.8
PTCD3-219ENST00000494323 OR2J3O76001 311 aa3.81□□□□□ -1.8
PTCD3-219ENST00000494323 IGKV3-20P01619 116 aa3.81□□□□□ -1.8
PTCD3-219ENST00000494323 OR9G9P0C7N8 305 aa3.81□□□□□ -1.8
PTCD3-219ENST00000494323 GSTT2P0CG29 244 aa3.81□□□□□ -1.8
PTCD3-219ENST00000494323 GSTT2BP0CG30 244 aa3.81□□□□□ -1.8
PTCD3-219ENST00000494323 UBBP0CG47 229 aa3.81□□□□□ -1.8
PTCD3-219ENST00000494323 CBLN1P23435 193 aa3.81□□□□□ -1.8
PTCD3-219ENST00000494323 CNN1P51911 297 aaKnown RBP3.81□□□□□ -1.8
PTCD3-219ENST00000494323 TMEM50BP56557 158 aa3.81□□□□□ -1.8
PTCD3-219ENST00000494323 HLA-DRB3P79483 266 aa3.81□□□□□ -1.8
PTCD3-219ENST00000494323 MED21Q13503 144 aa3.81□□□□□ -1.8
PTCD3-219ENST00000494323 EXOSC2Q13868 293 aaKnown RBP3.81□□□□□ -1.8
PTCD3-219ENST00000494323 PRSS8Q16651 343 aa3.81□□□□□ -1.8
PTCD3-219ENST00000494323 C15orf32Q32M92 178 aa3.81□□□□□ -1.8
PTCD3-219ENST00000494323 RBM48Q5RL73 367 aaKnown RBP3.81□□□□□ -1.8
PTCD3-219ENST00000494323 C1orf100Q5SVJ3 147 aa3.81□□□□□ -1.8
PTCD3-219ENST00000494323 ZFP1Q6P2D0 407 aa3.81□□□□□ -1.8
PTCD3-219ENST00000494323 CEMP1Q6PRD7 247 aaPredicted RBP3.81□□□□□ -1.8
PTCD3-219ENST00000494323 C19orf35Q6ZS72 473 aa3.81□□□□□ -1.8
PTCD3-219ENST00000494323 CEACAM19Q7Z692 300 aa3.81□□□□□ -1.8
PTCD3-219ENST00000494323 OR5AP2Q8NGF4 316 aa3.81□□□□□ -1.8
PTCD3-219ENST00000494323 OR52B4Q8NGK2 314 aa3.81□□□□□ -1.8
PTCD3-219ENST00000494323 OR2K2Q8NGT1 345 aa3.81□□□□□ -1.8
PTCD3-219ENST00000494323 SRSF12Q8WXF0 261 aaKnown RBP3.81□□□□□ -1.8
PTCD3-219ENST00000494323 ACOT12Q8WYK0 555 aa3.81□□□□□ -1.8
PTCD3-219ENST00000494323 THRSPQ92748 146 aa3.81□□□□□ -1.8
PTCD3-219ENST00000494323 ARHGAP5-AS1Q96IT6 56 aa3.81□□□□□ -1.8
PTCD3-219ENST00000494323 PRAC1Q96KF2 57 aa3.81□□□□□ -1.8
PTCD3-219ENST00000494323 FAM218AQ96MZ4 157 aa3.81□□□□□ -1.8
PTCD3-219ENST00000494323 CMSS1Q9BQ75 279 aaKnown RBP3.81□□□□□ -1.8
PTCD3-219ENST00000494323 TM2D1Q9BX74 207 aa3.81□□□□□ -1.8
PTCD3-219ENST00000494323 PECRQ9BY49 303 aa3.81□□□□□ -1.8
PTCD3-219ENST00000494323 LPAR5Q9H1C0 372 aa3.81□□□□□ -1.8
PTCD3-219ENST00000494323 OR2D2Q9H210 308 aa3.81□□□□□ -1.8
PTCD3-219ENST00000494323 S100A14Q9HCY8 104 aa3.81□□□□□ -1.8
PTCD3-219ENST00000494323 ZC4H2Q9NQZ6 224 aa3.81□□□□□ -1.8
PTCD3-219ENST00000494323 SMPD3Q9NY59 655 aaPredicted RBP3.81□□□□□ -1.8
PTCD3-219ENST00000494323 RBM7Q9Y580 266 aaKnown RBP3.81□□□□□ -1.8
PTCD3-219ENST00000494323 A0A087WZ39 114 aa3.8□□□□□ -1.8
PTCD3-219ENST00000494323 LOC102724200A0A096LPH7 203 aaPredicted RBP3.8□□□□□ -1.8
PTCD3-219ENST00000494323 TRBV9A0A0B4J1U6 114 aa3.8□□□□□ -1.8
PTCD3-219ENST00000494323 EFCAB10A6NFE3 127 aa3.8□□□□□ -1.8
PTCD3-219ENST00000494323 TMEM14DPA8MWL7 114 aa3.8□□□□□ -1.8
PTCD3-219ENST00000494323 E7EUB6 86 aa3.8□□□□□ -1.8
PTCD3-219ENST00000494323 GGCTO75223 188 aaKnown RBP3.8□□□□□ -1.8
PTCD3-219ENST00000494323 B3GALNT1O75752 331 aa3.8□□□□□ -1.8
PTCD3-219ENST00000494323 CRYZL1O95825 349 aa3.8□□□□□ -1.8
PTCD3-219ENST00000494323 AREGP15514 252 aa3.8□□□□□ -1.8
PTCD3-219ENST00000494323 CAMLGP49069 296 aa3.8□□□□□ -1.8
PTCD3-219ENST00000494323 WNT4P56705 351 aa3.8□□□□□ -1.8
PTCD3-219ENST00000494323 CLDN12P56749 244 aa3.8□□□□□ -1.8
PTCD3-219ENST00000494323 TAS2R43P59537 309 aa3.8□□□□□ -1.8
PTCD3-219ENST00000494323 GAMTQ14353 236 aa3.8□□□□□ -1.8
PTCD3-219ENST00000494323 RTL8BQ17RB0 113 aa3.8□□□□□ -1.8
PTCD3-219ENST00000494323 VMA21Q3ZAQ7 101 aa3.8□□□□□ -1.8
PTCD3-219ENST00000494323 ZNF876PQ49A33 203 aa3.8□□□□□ -1.8
PTCD3-219ENST00000494323 C10orf55Q5SWW7 151 aa3.8□□□□□ -1.8
PTCD3-219ENST00000494323 ZNF57Q68EA5 555 aaPredicted RBP3.8□□□□□ -1.8
PTCD3-219ENST00000494323 LAIR2Q6ISS4 152 aa3.8□□□□□ -1.8
PTCD3-219ENST00000494323 CLEC19AQ6UXS0 136 aa3.8□□□□□ -1.8
PTCD3-219ENST00000494323 AHSA2Q719I0 299 aa3.8□□□□□ -1.8
PTCD3-219ENST00000494323 MOB1BQ7L9L4 216 aa3.8□□□□□ -1.8
PTCD3-219ENST00000494323 SLC16A13Q7RTY0 426 aa3.8□□□□□ -1.8
PTCD3-219ENST00000494323 LYG2Q86SG7 212 aa3.8□□□□□ -1.8
PTCD3-219ENST00000494323 C10orf67Q8IYJ2 551 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms