RNA–Protein interactions for RNA: ENST00000494000.1

FNDC3B-212, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 1 (best)

Gene FNDC3B, Length 2,600 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-212ENST00000494000 TMEM200BQ69YZ2 307 aa5.47□□□□□ -1.53
FNDC3B-212ENST00000494000 CCDC144NLQ6NUI1 221 aa5.47□□□□□ -1.53
FNDC3B-212ENST00000494000 LYZL2Q7Z4W2 148 aa5.47□□□□□ -1.53
FNDC3B-212ENST00000494000 ZNF439Q8NDP4 499 aa5.47□□□□□ -1.53
FNDC3B-212ENST00000494000 OR5B3Q8NH48 314 aa5.47□□□□□ -1.53
FNDC3B-212ENST00000494000 AQP10Q96PS8 301 aa5.47□□□□□ -1.53
FNDC3B-212ENST00000494000 PRRC2CQ9Y520 2896 aaKnown RBP5.47□□□□□ -1.53
FNDC3B-212ENST00000494000 PPIAL4CA0A0B4J2A2 164 aa5.47□□□□□ -1.53
FNDC3B-212ENST00000494000 GPR137BO60478 399 aa5.47□□□□□ -1.53
FNDC3B-212ENST00000494000 P2RY1P47900 373 aa5.47□□□□□ -1.53
FNDC3B-212ENST00000494000 TCL1AP56279 114 aa5.47□□□□□ -1.53
FNDC3B-212ENST00000494000 UBA52P62987 128 aaKnown RBP5.47□□□□□ -1.53
FNDC3B-212ENST00000494000 TCF23Q7RTU1 214 aa5.47□□□□□ -1.53
FNDC3B-212ENST00000494000 TGIF2LYQ8IUE0 185 aa5.47□□□□□ -1.53
FNDC3B-212ENST00000494000 KIR3DL3Q8N743 410 aa5.47□□□□□ -1.53
FNDC3B-212ENST00000494000 UBAC2Q8NBM4 344 aa5.47□□□□□ -1.53
FNDC3B-212ENST00000494000 OR4D5Q8NGN0 318 aa5.47□□□□□ -1.53
FNDC3B-212ENST00000494000 DCUN1D4Q92564 292 aa5.47□□□□□ -1.53
FNDC3B-212ENST00000494000 ISOC2Q96AB3 205 aa5.47□□□□□ -1.53
FNDC3B-212ENST00000494000 BBC3Q96PG8 261 aaPredicted RBP5.47□□□□□ -1.53
FNDC3B-212ENST00000494000 ARL6Q9H0F7 186 aa5.47□□□□□ -1.53
FNDC3B-212ENST00000494000 THYN1Q9P016 225 aa5.47□□□□□ -1.53
FNDC3B-212ENST00000494000 CTSZQ9UBR2 303 aa5.47□□□□□ -1.53
FNDC3B-212ENST00000494000 DSCAMO60469 2012 aa5.47□□□□□ -1.53
FNDC3B-212ENST00000494000 ARFGEF3Q5TH69 2177 aa5.47□□□□□ -1.53
FNDC3B-212ENST00000494000 RP1L1Q8IWN7 2480 aaPredicted RBP5.46□□□□□ -1.53
FNDC3B-212ENST00000494000 A0A087X0K7 114 aa5.46□□□□□ -1.53
FNDC3B-212ENST00000494000 IGHV3-43A0A0B4J1X8 118 aa5.46□□□□□ -1.53
FNDC3B-212ENST00000494000 M0R1W7 72 aa5.46□□□□□ -1.53
FNDC3B-212ENST00000494000 BCL2L11O43521 198 aa5.46□□□□□ -1.53
FNDC3B-212ENST00000494000 C1QL1O75973 258 aa5.46□□□□□ -1.53
FNDC3B-212ENST00000494000 TYMSP04818 313 aa5.46□□□□□ -1.53
FNDC3B-212ENST00000494000 IGHV3-43DP0DP04 118 aa5.46□□□□□ -1.53
FNDC3B-212ENST00000494000 COX6B1P14854 86 aa5.46□□□□□ -1.53
FNDC3B-212ENST00000494000 DUTP33316 252 aaKnown RBP5.46□□□□□ -1.53
FNDC3B-212ENST00000494000 LPAR6P43657 344 aa5.46□□□□□ -1.53
FNDC3B-212ENST00000494000 AKR1C2P52895 323 aa5.46□□□□□ -1.53
FNDC3B-212ENST00000494000 DSCR9P59020 149 aa5.46□□□□□ -1.53
FNDC3B-212ENST00000494000 ERVFRD-1P60508 538 aa5.46□□□□□ -1.53
FNDC3B-212ENST00000494000 ERVK-16P61578 105 aa5.46□□□□□ -1.53
FNDC3B-212ENST00000494000 HOXA4Q00056 320 aaPredicted RBP5.46□□□□□ -1.53
FNDC3B-212ENST00000494000 LYPD2Q6UXB3 125 aa5.46□□□□□ -1.53
FNDC3B-212ENST00000494000 C5orf24Q7Z6I8 188 aa5.46□□□□□ -1.53
FNDC3B-212ENST00000494000 LY6G5BQ8NDX9 201 aa5.46□□□□□ -1.53
FNDC3B-212ENST00000494000 OR4S2Q8NH73 311 aa5.46□□□□□ -1.53
FNDC3B-212ENST00000494000 OR9G1Q8NH87 305 aa5.46□□□□□ -1.53
FNDC3B-212ENST00000494000 PHYHIPLQ96FC7 376 aa5.46□□□□□ -1.53
FNDC3B-212ENST00000494000 SLC25A31Q9H0C2 315 aa5.46□□□□□ -1.53
FNDC3B-212ENST00000494000 IFI27L2Q9H2X8 130 aa5.46□□□□□ -1.53
FNDC3B-212ENST00000494000 AMMECR1Q9Y4X0 333 aaPredicted RBP5.46□□□□□ -1.53
FNDC3B-212ENST00000494000 V9GYY9 64 aa5.46□□□□□ -1.53
FNDC3B-212ENST00000494000 DSCAML1Q8TD84 2053 aa5.46□□□□□ -1.54
FNDC3B-212ENST00000494000 SPTA1P02549 2419 aa5.46□□□□□ -1.54
FNDC3B-212ENST00000494000 A0A1B0GW55 424 aa5.46□□□□□ -1.54
FNDC3B-212ENST00000494000 K7EPK0 472 aa5.46□□□□□ -1.54
FNDC3B-212ENST00000494000 TNFSF12O43508 249 aa5.46□□□□□ -1.54
FNDC3B-212ENST00000494000 CA1P00915 261 aaPredicted RBP5.46□□□□□ -1.54
FNDC3B-212ENST00000494000 DUX4L2P0CJ85 424 aa5.46□□□□□ -1.54
FNDC3B-212ENST00000494000 DUX4L3P0CJ86 424 aa5.46□□□□□ -1.54
FNDC3B-212ENST00000494000 DUX4L4P0CJ87 422 aa5.46□□□□□ -1.54
FNDC3B-212ENST00000494000 DUX4L5P0CJ88 424 aa5.46□□□□□ -1.54
FNDC3B-212ENST00000494000 DUX4L6P0CJ89 424 aa5.46□□□□□ -1.54
FNDC3B-212ENST00000494000 DUX4L7P0CJ90 424 aa5.46□□□□□ -1.54
FNDC3B-212ENST00000494000 CXCL2P19875 107 aa5.46□□□□□ -1.54
FNDC3B-212ENST00000494000 NFYBP25208 207 aa5.46□□□□□ -1.54
FNDC3B-212ENST00000494000 S100A2P29034 98 aa5.46□□□□□ -1.54
FNDC3B-212ENST00000494000 ZNF137PP52743 207 aa5.46□□□□□ -1.54
FNDC3B-212ENST00000494000 DLX6P56179 175 aa5.46□□□□□ -1.54
FNDC3B-212ENST00000494000 TAS2R30P59541 319 aa5.46□□□□□ -1.54
FNDC3B-212ENST00000494000 S100A10P60903 97 aa5.46□□□□□ -1.54
FNDC3B-212ENST00000494000 GNB2P62879 340 aa5.46□□□□□ -1.54
FNDC3B-212ENST00000494000 LRRC37A5PQ49AS3 106 aa5.46□□□□□ -1.54
FNDC3B-212ENST00000494000 EIF5AL1Q6IS14 154 aaKnown RBP5.46□□□□□ -1.54
FNDC3B-212ENST00000494000 UBALD1Q8TB05 177 aa5.46□□□□□ -1.54
FNDC3B-212ENST00000494000 IGFBPL1Q8WX77 278 aa5.46□□□□□ -1.54
FNDC3B-212ENST00000494000 RNF126Q9BV68 326 aa5.46□□□□□ -1.54
FNDC3B-212ENST00000494000 SNHG12Q9BXW3 62 aa5.46□□□□□ -1.54
FNDC3B-212ENST00000494000 DUX4Q9UBX2 424 aa5.46□□□□□ -1.54
FNDC3B-212ENST00000494000 PCNX1Q96RV3 2341 aa5.46□□□□□ -1.54
FNDC3B-212ENST00000494000 PLCE1Q9P212 2302 aa5.46□□□□□ -1.54
FNDC3B-212ENST00000494000 MAP1BP46821 2468 aaKnown RBP5.46□□□□□ -1.54
FNDC3B-212ENST00000494000 BOD1L1Q8NFC6 3051 aa5.46□□□□□ -1.54
FNDC3B-212ENST00000494000 TMEM218A2RU14 115 aa5.45□□□□□ -1.54
FNDC3B-212ENST00000494000 M0R1X1 148 aa5.45□□□□□ -1.54
FNDC3B-212ENST00000494000 PITX3O75364 302 aa5.45□□□□□ -1.54
FNDC3B-212ENST00000494000 HRASP01112 189 aa5.45□□□□□ -1.54
FNDC3B-212ENST00000494000 METTL15P1P0C7V9 234 aa5.45□□□□□ -1.54
FNDC3B-212ENST00000494000 PLP1P60201 277 aa5.45□□□□□ -1.54
FNDC3B-212ENST00000494000 LTC4SQ16873 150 aa5.45□□□□□ -1.54
FNDC3B-212ENST00000494000 RTL8BQ17RB0 113 aa5.45□□□□□ -1.54
FNDC3B-212ENST00000494000 ZNF585BQ52M93 769 aa5.45□□□□□ -1.54
FNDC3B-212ENST00000494000 CT45A1Q5HYN5 189 aa5.45□□□□□ -1.54
FNDC3B-212ENST00000494000 DUX4L9Q6RFH8 374 aaPredicted RBP5.45□□□□□ -1.54
FNDC3B-212ENST00000494000 LYG1Q8N1E2 194 aa5.45□□□□□ -1.54
FNDC3B-212ENST00000494000 CT45A3Q8NHU0 189 aa5.45□□□□□ -1.54
FNDC3B-212ENST00000494000 SSBP3Q9BWW4 388 aaPredicted RBP5.45□□□□□ -1.54
FNDC3B-212ENST00000494000 QTRT1Q9BXR0 403 aaKnown RBP5.45□□□□□ -1.54
FNDC3B-212ENST00000494000 PARP12Q9H0J9 701 aaKnown RBP5.45□□□□□ -1.54
FNDC3B-212ENST00000494000 TMEM133Q9H2Q1 129 aa5.45□□□□□ -1.54
FNDC3B-212ENST00000494000 KIR2DL5BA0A0G2JN68 375 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms