RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 FCN2Q15485 313 aa11.72□□□□□ -0.53
ACTB-213ENST00000493945 KRTAP24-1Q3LI83 254 aa11.72□□□□□ -0.53
ACTB-213ENST00000493945 CTRB2Q6GPI1 263 aa11.72□□□□□ -0.53
ACTB-213ENST00000493945 C12orf54Q6X4T0 127 aa11.72□□□□□ -0.53
ACTB-213ENST00000493945 Q6ZS46 218 aa11.72□□□□□ -0.53
ACTB-213ENST00000493945 FAM223AQ8IWN6 122 aa11.72□□□□□ -0.53
ACTB-213ENST00000493945 OR5AU1Q8NGC0 362 aa11.72□□□□□ -0.53
ACTB-213ENST00000493945 ZNF436Q9C0F3 470 aaPredicted RBP11.72□□□□□ -0.53
ACTB-213ENST00000493945 LINC00527Q9UJ94 153 aa11.72□□□□□ -0.53
ACTB-213ENST00000493945 FBXO7Q9Y3I1 522 aa11.72□□□□□ -0.53
ACTB-213ENST00000493945 LSM5Q9Y4Y9 91 aaKnown RBP11.72□□□□□ -0.53
ACTB-213ENST00000493945 F11RQ9Y624 299 aaKnown RBP11.72□□□□□ -0.53
ACTB-213ENST00000493945 MPTX1A8MV57 137 aa11.71□□□□□ -0.53
ACTB-213ENST00000493945 G3V318 75 aa11.71□□□□□ -0.53
ACTB-213ENST00000493945 TRGV3P03979 118 aa11.71□□□□□ -0.53
ACTB-213ENST00000493945 APELAP0DMC3 54 aa11.71□□□□□ -0.53
ACTB-213ENST00000493945 EGR2P11161 476 aaPredicted RBP11.71□□□□□ -0.53
ACTB-213ENST00000493945 MYOD1P15172 320 aa11.71□□□□□ -0.53
ACTB-213ENST00000493945 AREGP15514 252 aa11.71□□□□□ -0.53
ACTB-213ENST00000493945 NPY1RP25929 384 aa11.71□□□□□ -0.53
ACTB-213ENST00000493945 TPPP2P59282 170 aa11.71□□□□□ -0.53
ACTB-213ENST00000493945 EXOSC2Q13868 293 aaKnown RBP11.71□□□□□ -0.53
ACTB-213ENST00000493945 AWAT1Q58HT5 328 aa11.71□□□□□ -0.53
ACTB-213ENST00000493945 SPINK9Q5DT21 86 aa11.71□□□□□ -0.53
ACTB-213ENST00000493945 KHDC1LQ5JSQ8 128 aa11.71□□□□□ -0.53
ACTB-213ENST00000493945 ETFRF1Q6IPR1 90 aa11.71□□□□□ -0.53
ACTB-213ENST00000493945 OR5T1Q8NG75 326 aa11.71□□□□□ -0.53
ACTB-213ENST00000493945 USMG5Q96IX5 58 aa11.71□□□□□ -0.53
ACTB-213ENST00000493945 STRAPQ9Y3F4 350 aaKnown RBP11.71□□□□□ -0.53
ACTB-213ENST00000493945 LINC01548A6NM66 108 aa11.7□□□□□ -0.54
ACTB-213ENST00000493945 TSC22D2O75157 780 aa11.7□□□□□ -0.54
ACTB-213ENST00000493945 OR8U8P0C7N1 319 aa11.7□□□□□ -0.54
ACTB-213ENST00000493945 PPIFP30405 207 aaKnown RBP11.7□□□□□ -0.54
ACTB-213ENST00000493945 NUP62P37198 522 aaPredicted RBP11.7□□□□□ -0.54
ACTB-213ENST00000493945 PROK1P58294 105 aa11.7□□□□□ -0.54
ACTB-213ENST00000493945 CFHR3Q02985 330 aa11.7□□□□□ -0.54
ACTB-213ENST00000493945 WT1-ASQ06250 92 aa11.7□□□□□ -0.54
ACTB-213ENST00000493945 NECAP1Q8NC96 275 aa11.7□□□□□ -0.54
ACTB-213ENST00000493945 OR10W1Q8NGF6 305 aa11.7□□□□□ -0.54
ACTB-213ENST00000493945 THAP6Q8TBB0 222 aa11.7□□□□□ -0.54
ACTB-213ENST00000493945 WFDC12Q8WWY7 111 aa11.7□□□□□ -0.54
ACTB-213ENST00000493945 CXorf58Q96LI9 332 aa11.7□□□□□ -0.54
ACTB-213ENST00000493945 GAR1Q9NY12 217 aaKnown RBP11.7□□□□□ -0.54
ACTB-213ENST00000493945 PAIP2BQ9ULR5 123 aaKnown RBP11.7□□□□□ -0.54
ACTB-213ENST00000493945 E5RGE8 158 aa11.69□□□□□ -0.54
ACTB-213ENST00000493945 E7EUB6 86 aa11.69□□□□□ -0.54
ACTB-213ENST00000493945 K7EPK0 472 aa11.69□□□□□ -0.54
ACTB-213ENST00000493945 SIX6O95475 246 aa11.69□□□□□ -0.54
ACTB-213ENST00000493945 IGLV1-40P01703 118 aa11.69□□□□□ -0.54
ACTB-213ENST00000493945 MBPP02686 304 aaPredicted RBP11.69□□□□□ -0.54
ACTB-213ENST00000493945 IFNA4P05014 189 aa11.69□□□□□ -0.54
ACTB-213ENST00000493945 REG1AP05451 166 aa11.69□□□□□ -0.54
ACTB-213ENST00000493945 IAPPP10997 89 aa11.69□□□□□ -0.54
ACTB-213ENST00000493945 BCAP31P51572 246 aa11.69□□□□□ -0.54
ACTB-213ENST00000493945 H2BFSP57053 126 aa11.69□□□□□ -0.54
ACTB-213ENST00000493945 POLR2GP62487 172 aaKnown RBP eCLIP11.69□□□□□ -0.54
ACTB-213ENST00000493945 SRSF4Q08170 494 aaKnown RBP11.69□□□□□ -0.54
ACTB-213ENST00000493945 LRRC37A5PQ49AS3 106 aa11.69□□□□□ -0.54
ACTB-213ENST00000493945 C2orf83Q53S99 150 aa11.69□□□□□ -0.54
ACTB-213ENST00000493945 C19orf54Q5BKX5 351 aa11.69□□□□□ -0.54
ACTB-213ENST00000493945 SLC25A24Q6NUK1 477 aa11.69□□□□□ -0.54
ACTB-213ENST00000493945 ZNF329Q86UD4 541 aa11.69□□□□□ -0.54
ACTB-213ENST00000493945 STX12Q86Y82 276 aa11.69□□□□□ -0.54
ACTB-213ENST00000493945 RNASEH2CQ8TDP1 164 aaKnown RBP11.69□□□□□ -0.54
ACTB-213ENST00000493945 PPP1R1CQ8WVI7 109 aa11.69□□□□□ -0.54
ACTB-213ENST00000493945 SMIM8Q96KF7 97 aa11.69□□□□□ -0.54
ACTB-213ENST00000493945 MAGT1Q9H0U3 335 aa11.69□□□□□ -0.54
ACTB-213ENST00000493945 PSENENQ9NZ42 101 aa11.69□□□□□ -0.54
ACTB-213ENST00000493945 RCL1Q9Y2P8 373 aaKnown RBP11.69□□□□□ -0.54
ACTB-213ENST00000493945 NF1P21359 2839 aa11.68□□□□□ -0.54
ACTB-213ENST00000493945 TCRBV4S1A1TA0A5B7 111 aa11.68□□□□□ -0.54
ACTB-213ENST00000493945 CGB1A6NKQ9 187 aa11.68□□□□□ -0.54
ACTB-213ENST00000493945 PSMB8P28062 276 aa11.68□□□□□ -0.54
ACTB-213ENST00000493945 CAV2P51636 162 aa11.68□□□□□ -0.54
ACTB-213ENST00000493945 RAB32Q13637 225 aa11.68□□□□□ -0.54
ACTB-213ENST00000493945 SPANXN5Q5MJ07 72 aa11.68□□□□□ -0.54
ACTB-213ENST00000493945 ASPHD1Q5U4P2 390 aa11.68□□□□□ -0.54
ACTB-213ENST00000493945 C3orf56Q8N813 242 aa11.68□□□□□ -0.54
ACTB-213ENST00000493945 RNF152Q8N8N0 203 aa11.68□□□□□ -0.54
ACTB-213ENST00000493945 OR11H7Q8NGC8 314 aa11.68□□□□□ -0.54
ACTB-213ENST00000493945 EEF1AKMT3Q96AZ1 226 aa11.68□□□□□ -0.54
ACTB-213ENST00000493945 P2RX4Q99571 388 aa11.68□□□□□ -0.54
ACTB-213ENST00000493945 SLC25A31Q9H0C2 315 aa11.68□□□□□ -0.54
ACTB-213ENST00000493945 TSSC4Q9Y5U2 329 aaPredicted RBP11.68□□□□□ -0.54
ACTB-213ENST00000493945 ATRQ13535 2644 aa11.68□□□□□ -0.54
ACTB-213ENST00000493945 A0A1B0GW64 132 aa11.67□□□□□ -0.54
ACTB-213ENST00000493945 DEDDO75618 318 aa11.67□□□□□ -0.54
ACTB-213ENST00000493945 CXCL3P19876 107 aa11.67□□□□□ -0.54
ACTB-213ENST00000493945 OPRK1P41145 380 aa11.67□□□□□ -0.54
ACTB-213ENST00000493945 RAB9AP51151 201 aa11.67□□□□□ -0.54
ACTB-213ENST00000493945 HBG1P69891 147 aa11.67□□□□□ -0.54
ACTB-213ENST00000493945 HBG2P69892 147 aa11.67□□□□□ -0.54
ACTB-213ENST00000493945 RHOGP84095 191 aa11.67□□□□□ -0.54
ACTB-213ENST00000493945 ATP5G2Q06055 141 aa11.67□□□□□ -0.54
ACTB-213ENST00000493945 C2orf68Q2NKX9 166 aa11.67□□□□□ -0.54
ACTB-213ENST00000493945 DCUN1D4Q92564 292 aa11.67□□□□□ -0.54
ACTB-213ENST00000493945 MISP3Q96FF7 219 aa11.67□□□□□ -0.54
ACTB-213ENST00000493945 FBXL7Q9UJT9 491 aa11.67□□□□□ -0.54
ACTB-213ENST00000493945 hCG_2014768A0A024R1R8 64 aa11.66□□□□□ -0.54
ACTB-213ENST00000493945 IGLV11-55A0A075B6I3 123 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms