RNA–Protein interactions for RNA: ENST00000493682.6

COL9A1-210, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-210ENST00000493682 PGLYRP1O75594 196 aaPredicted RBP12.8□□□□□ -0.36
COL9A1-210ENST00000493682 DEDDO75618 318 aa12.8□□□□□ -0.36
COL9A1-210ENST00000493682 KRASP01116 189 aa12.8□□□□□ -0.36
COL9A1-210ENST00000493682 RLN1P04808 185 aa12.8□□□□□ -0.36
COL9A1-210ENST00000493682 F2RP25116 425 aa12.8□□□□□ -0.36
COL9A1-210ENST00000493682 Q56UQ5 140 aa12.8□□□□□ -0.36
COL9A1-210ENST00000493682 FCAMRQ8WWV6 532 aa12.8□□□□□ -0.36
COL9A1-210ENST00000493682 BORCS5Q969J3 196 aa12.8□□□□□ -0.36
COL9A1-210ENST00000493682 ZNF414Q96IQ9 312 aa12.8□□□□□ -0.36
COL9A1-210ENST00000493682 RNF2Q99496 336 aa12.8□□□□□ -0.36
COL9A1-210ENST00000493682 EHFQ9NZC4 300 aa12.8□□□□□ -0.36
COL9A1-210ENST00000493682 CTSGP08311 255 aa12.79□□□□□ -0.36
COL9A1-210ENST00000493682 G6PCP35575 357 aa12.79□□□□□ -0.36
COL9A1-210ENST00000493682 LPAR6P43657 344 aa12.79□□□□□ -0.36
COL9A1-210ENST00000493682 ZNF124Q15973 351 aa12.79□□□□□ -0.36
COL9A1-210ENST00000493682 LGALS9CQ6DKI2 356 aa12.79□□□□□ -0.36
COL9A1-210ENST00000493682 DHRS11Q6UWP2 260 aa12.79□□□□□ -0.36
COL9A1-210ENST00000493682 CADM3Q8N126 398 aa12.79□□□□□ -0.36
COL9A1-210ENST00000493682 MOB3AQ96BX8 217 aa12.79□□□□□ -0.36
COL9A1-210ENST00000493682 C6orf62Q9GZU0 229 aaPredicted RBP12.79□□□□□ -0.36
COL9A1-210ENST00000493682 IGHV7-4-1A0A0J9YVY3 117 aa12.78□□□□□ -0.36
COL9A1-210ENST00000493682 LOC100506127A0A0U1RQW1 187 aa12.78□□□□□ -0.36
COL9A1-210ENST00000493682 CHEK1O14757 476 aa12.78□□□□□ -0.36
COL9A1-210ENST00000493682 SNAPC5O75971 98 aa12.78□□□□□ -0.36
COL9A1-210ENST00000493682 RFX2P48378 723 aa12.78□□□□□ -0.36
COL9A1-210ENST00000493682 DGCR14Q96DF8 476 aaKnown RBP12.78□□□□□ -0.36
COL9A1-210ENST00000493682 ZNF2Q9BSG1 426 aaPredicted RBP12.78□□□□□ -0.36
COL9A1-210ENST00000493682 RHPN1-AS1Q9BWJ2 59 aa12.78□□□□□ -0.36
COL9A1-210ENST00000493682 CSTL1Q9H114 145 aa12.78□□□□□ -0.36
COL9A1-210ENST00000493682 IFT46Q9NQC8 304 aa12.78□□□□□ -0.36
COL9A1-210ENST00000493682 IGHV3-49A0A0A0MS15 119 aa12.77□□□□□ -0.37
COL9A1-210ENST00000493682 DBX1A6NMT0 343 aa12.77□□□□□ -0.37
COL9A1-210ENST00000493682 MPTX1A8MV57 137 aa12.77□□□□□ -0.37
COL9A1-210ENST00000493682 TFPI2P48307 235 aa12.77□□□□□ -0.37
COL9A1-210ENST00000493682 RELQ04864 619 aaPredicted RBP12.77□□□□□ -0.37
COL9A1-210ENST00000493682 TMEM116Q8NCL8 245 aa12.77□□□□□ -0.37
COL9A1-210ENST00000493682 GATAD1Q8WUU5 269 aa12.77□□□□□ -0.37
COL9A1-210ENST00000493682 TMEM56Q96MV1 263 aa12.77□□□□□ -0.37
COL9A1-210ENST00000493682 RARRES2Q99969 163 aa12.77□□□□□ -0.37
COL9A1-210ENST00000493682 PRNDQ9UKY0 176 aa12.77□□□□□ -0.37
COL9A1-210ENST00000493682 NUPL2O15504 423 aaKnown RBP12.76□□□□□ -0.37
COL9A1-210ENST00000493682 XRCC3O43542 346 aa12.76□□□□□ -0.37
COL9A1-210ENST00000493682 YIF1AO95070 293 aa12.76□□□□□ -0.37
COL9A1-210ENST00000493682 CMC4P56277 68 aaPredicted RBP12.76□□□□□ -0.37
COL9A1-210ENST00000493682 CMTM1Q8IZ96 169 aa12.76□□□□□ -0.37
COL9A1-210ENST00000493682 TSPAN14Q8NG11 270 aa12.76□□□□□ -0.37
COL9A1-210ENST00000493682 OR1P1Q8NH06 330 aa12.76□□□□□ -0.37
COL9A1-210ENST00000493682 OR10C1Q96KK4 312 aa12.76□□□□□ -0.37
COL9A1-210ENST00000493682 TMEM14BQ9NUH8 114 aa12.76□□□□□ -0.37
COL9A1-210ENST00000493682 FKBP11Q9NYL4 201 aa12.76□□□□□ -0.37
COL9A1-210ENST00000493682 IGKV3-7A0A075B6H7 116 aa12.75□□□□□ -0.37
COL9A1-210ENST00000493682 I3L2K1 104 aa12.75□□□□□ -0.37
COL9A1-210ENST00000493682 PMP2P02689 132 aa12.75□□□□□ -0.37
COL9A1-210ENST00000493682 NANOS2P60321 138 aaKnown RBP12.75□□□□□ -0.37
COL9A1-210ENST00000493682 C11orf45Q8TAV5 145 aa12.75□□□□□ -0.37
COL9A1-210ENST00000493682 SLC25A46Q96AG3 418 aa12.75□□□□□ -0.37
COL9A1-210ENST00000493682 MISP3Q96FF7 219 aa12.75□□□□□ -0.37
COL9A1-210ENST00000493682 YTHDF1Q9BYJ9 559 aaKnown RBP12.75□□□□□ -0.37
COL9A1-210ENST00000493682 ANAPC10Q9UM13 185 aa12.75□□□□□ -0.37
COL9A1-210ENST00000493682 C15orf61A6NNL5 157 aa12.74□□□□□ -0.37
COL9A1-210ENST00000493682 GPR31O00270 319 aa12.74□□□□□ -0.37
COL9A1-210ENST00000493682 MFAP4P55083 255 aa12.74□□□□□ -0.37
COL9A1-210ENST00000493682 FAM90A2PQ658T7 463 aa12.74□□□□□ -0.37
COL9A1-210ENST00000493682 GBGT1Q8N5D6 347 aa12.74□□□□□ -0.37
COL9A1-210ENST00000493682 OR5H2Q8NGV7 314 aa12.74□□□□□ -0.37
COL9A1-210ENST00000493682 OR11H2Q8NH07 326 aa12.74□□□□□ -0.37
COL9A1-210ENST00000493682 S100A16Q96FQ6 103 aaKnown RBP12.74□□□□□ -0.37
COL9A1-210ENST00000493682 CMTM3Q96MX0 182 aa12.74□□□□□ -0.37
COL9A1-210ENST00000493682 TXN2Q99757 166 aa12.74□□□□□ -0.37
COL9A1-210ENST00000493682 NXF2Q9GZY0 626 aaKnown RBP12.74□□□□□ -0.37
COL9A1-210ENST00000493682 MFFQ9GZY8 342 aa12.74□□□□□ -0.37
COL9A1-210ENST00000493682 FXYD6Q9H0Q3 95 aa12.74□□□□□ -0.37
COL9A1-210ENST00000493682 C11orf68Q9H3H3 251 aaKnown RBP12.74□□□□□ -0.37
COL9A1-210ENST00000493682 FBXL17Q9UF56 701 aa12.74□□□□□ -0.37
COL9A1-210ENST00000493682 IGHV3OR16-13A0A075B7E8 117 aa12.73□□□□□ -0.37
COL9A1-210ENST00000493682 TRAV14DV4A0A0A6YYC5 116 aa12.73□□□□□ -0.37
COL9A1-210ENST00000493682 IGHV3-74A0A0B4J1X5 117 aa12.73□□□□□ -0.37
COL9A1-210ENST00000493682 TMEM127O75204 238 aa12.73□□□□□ -0.37
COL9A1-210ENST00000493682 IGHV3-48P01763 117 aa12.73□□□□□ -0.37
COL9A1-210ENST00000493682 NAT1P18440 290 aa12.73□□□□□ -0.37
COL9A1-210ENST00000493682 TAS2R46P59540 309 aa12.73□□□□□ -0.37
COL9A1-210ENST00000493682 RBMS2Q15434 407 aaKnown RBP12.73□□□□□ -0.37
COL9A1-210ENST00000493682 LINC01559Q495D7 138 aa12.73□□□□□ -0.37
COL9A1-210ENST00000493682 OR6F1Q8NGZ6 308 aa12.73□□□□□ -0.37
COL9A1-210ENST00000493682 TSC22D3Q99576 134 aa12.73□□□□□ -0.37
COL9A1-210ENST00000493682 MT-CO2P00403 227 aa12.72□□□□□ -0.37
COL9A1-210ENST00000493682 IFNA4P05014 189 aa12.72□□□□□ -0.37
COL9A1-210ENST00000493682 PHLDA2Q53GA4 152 aa12.72□□□□□ -0.37
COL9A1-210ENST00000493682 DEFB4AO15263 64 aa12.71□□□□□ -0.37
COL9A1-210ENST00000493682 TAS2R20P59543 309 aa12.71□□□□□ -0.37
COL9A1-210ENST00000493682 PAFAH1B2P68402 229 aa12.71□□□□□ -0.37
COL9A1-210ENST00000493682 PRR20EP86478 221 aa12.71□□□□□ -0.37
COL9A1-210ENST00000493682 PRR20CP86479 221 aa12.71□□□□□ -0.37
COL9A1-210ENST00000493682 PRR20DP86480 221 aa12.71□□□□□ -0.37
COL9A1-210ENST00000493682 PRR20BP86481 221 aa12.71□□□□□ -0.37
COL9A1-210ENST00000493682 PRR20AP86496 221 aa12.71□□□□□ -0.37
COL9A1-210ENST00000493682 NEDD8Q15843 81 aa12.71□□□□□ -0.37
COL9A1-210ENST00000493682 UBE2NLQ5JXB2 153 aa12.71□□□□□ -0.37
COL9A1-210ENST00000493682 TMEM69Q5SWH9 247 aa12.71□□□□□ -0.37
COL9A1-210ENST00000493682 TCF24Q7RTU0 167 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms