RNA–Protein interactions for RNA: ENST00000493232.5

BRAT1-206, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-206ENST00000493232 RNASE1P07998 156 aaKnown RBP13.69□□□□□ -0.22
BRAT1-206ENST00000493232 ZFP36L1Q07352 338 aaKnown RBP13.69□□□□□ -0.22
BRAT1-206ENST00000493232 ZNF837Q96EG3 531 aaPredicted RBP13.69□□□□□ -0.22
BRAT1-206ENST00000493232 RPP21Q9H633 154 aaKnown RBP13.69□□□□□ -0.22
BRAT1-206ENST00000493232 EGR1P18146 543 aa13.68□□□□□ -0.22
BRAT1-206ENST00000493232 CFHR1Q03591 330 aa13.68□□□□□ -0.22
BRAT1-206ENST00000493232 SDF2L1Q9HCN8 221 aa13.68□□□□□ -0.22
BRAT1-206ENST00000493232 CBLN1P23435 193 aa13.68□□□□□ -0.22
BRAT1-206ENST00000493232 PSMB11A5LHX3 300 aa13.68□□□□□ -0.22
BRAT1-206ENST00000493232 PVRIGQ6DKI7 326 aa13.68□□□□□ -0.22
BRAT1-206ENST00000493232 TMEM144Q7Z5S9 345 aa13.68□□□□□ -0.22
BRAT1-206ENST00000493232 PLPPR1Q8TBJ4 325 aa13.68□□□□□ -0.22
BRAT1-206ENST00000493232 F11RQ9Y624 299 aaKnown RBP13.68□□□□□ -0.22
BRAT1-206ENST00000493232 MSGN1A6NI15 193 aa13.68□□□□□ -0.22
BRAT1-206ENST00000493232 CCL1P22362 96 aa13.68□□□□□ -0.22
BRAT1-206ENST00000493232 S4R3C0 116 aa13.68□□□□□ -0.22
BRAT1-206ENST00000493232 E9PLN8 166 aa13.68□□□□□ -0.22
BRAT1-206ENST00000493232 H3BRM9 83 aa13.68□□□□□ -0.22
BRAT1-206ENST00000493232 SAA1P0DJI8 122 aaPredicted RBP13.68□□□□□ -0.22
BRAT1-206ENST00000493232 TMEM170BQ5T4T1 132 aa13.68□□□□□ -0.22
BRAT1-206ENST00000493232 VKORC1Q9BQB6 163 aa13.68□□□□□ -0.22
BRAT1-206ENST00000493232 SLC50A1Q9BRV3 221 aa13.68□□□□□ -0.22
BRAT1-206ENST00000493232 TMEM133Q9H2Q1 129 aa13.68□□□□□ -0.22
BRAT1-206ENST00000493232 YAE1D1Q9NRH1 226 aa13.68□□□□□ -0.22
BRAT1-206ENST00000493232 DDTP30046 118 aa13.67□□□□□ -0.22
BRAT1-206ENST00000493232 ZNF646O15015 1829 aaPredicted RBP13.67□□□□□ -0.22
BRAT1-206ENST00000493232 TMEM183AQ8IXX5 376 aa13.67□□□□□ -0.22
BRAT1-206ENST00000493232 OR13C6PQ8NH95 151 aa13.67□□□□□ -0.22
BRAT1-206ENST00000493232 OTORQ9NRC9 128 aa13.67□□□□□ -0.22
BRAT1-206ENST00000493232 SAA2-SAA4A0A096LPE2 208 aa13.67□□□□□ -0.22
BRAT1-206ENST00000493232 SAA2P0DJI9 122 aaPredicted RBP13.67□□□□□ -0.22
BRAT1-206ENST00000493232 GCSAMLQ5JQS6 135 aa13.67□□□□□ -0.22
BRAT1-206ENST00000493232 PRSS22Q9GZN4 317 aa13.67□□□□□ -0.22
BRAT1-206ENST00000493232 SOD3P08294 240 aa13.67□□□□□ -0.22
BRAT1-206ENST00000493232 EFNB1P98172 346 aa13.67□□□□□ -0.22
BRAT1-206ENST00000493232 ZNF525Q8N782 197 aa13.67□□□□□ -0.22
BRAT1-206ENST00000493232 WDR90Q96KV7 1748 aa13.67□□□□□ -0.22
BRAT1-206ENST00000493232 CDKN1AP38936 164 aa13.66□□□□□ -0.22
BRAT1-206ENST00000493232 CARHSP1Q9Y2V2 147 aaKnown RBP13.66□□□□□ -0.22
BRAT1-206ENST00000493232 THBDP07204 575 aa13.66□□□□□ -0.22
BRAT1-206ENST00000493232 ZP1P60852 638 aa13.66□□□□□ -0.22
BRAT1-206ENST00000493232 TCF23Q7RTU1 214 aa13.66□□□□□ -0.22
BRAT1-206ENST00000493232 COLCA1Q6ZS62 124 aa13.66□□□□□ -0.22
BRAT1-206ENST00000493232 Q9H3A6 140 aa13.66□□□□□ -0.22
BRAT1-206ENST00000493232 TMEM160Q9NX00 188 aa13.66□□□□□ -0.22
BRAT1-206ENST00000493232 SDHCQ99643 169 aaPredicted RBP13.66□□□□□ -0.22
BRAT1-206ENST00000493232 ASXL3Q9C0F0 2248 aa13.66□□□□□ -0.22
BRAT1-206ENST00000493232 SCO2A0A1W2PP80 73 aa13.65□□□□□ -0.22
BRAT1-206ENST00000493232 SRP19P09132 144 aaKnown RBP13.65□□□□□ -0.22
BRAT1-206ENST00000493232 CCL3L1P16619 93 aa13.65□□□□□ -0.22
BRAT1-206ENST00000493232 FOXA3P55318 350 aaPredicted RBP13.65□□□□□ -0.22
BRAT1-206ENST00000493232 IFITM2Q01629 132 aa13.65□□□□□ -0.22
BRAT1-206ENST00000493232 FER1L6-AS1Q8NA97 138 aa13.65□□□□□ -0.22
BRAT1-206ENST00000493232 LINC01587Q99440 93 aa13.65□□□□□ -0.22
BRAT1-206ENST00000493232 C15orf61A6NNL5 157 aa13.65□□□□□ -0.22
BRAT1-206ENST00000493232 VDAC2P45880 294 aaPredicted RBP13.65□□□□□ -0.22
BRAT1-206ENST00000493232 ZNF497Q6ZNH5 498 aa13.65□□□□□ -0.22
BRAT1-206ENST00000493232 FLVCR1-AS1Q8TAF5 88 aa13.65□□□□□ -0.22
BRAT1-206ENST00000493232 KCNS1Q96KK3 526 aa13.65□□□□□ -0.22
BRAT1-206ENST00000493232 SCGB3A1Q96QR1 104 aa13.65□□□□□ -0.22
BRAT1-206ENST00000493232 FAM186AA6NE01 2351 aa13.65□□□□□ -0.22
BRAT1-206ENST00000493232 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.65□□□□□ -0.22
BRAT1-206ENST00000493232 TDRD6O60522 2096 aaKnown RBP13.65□□□□□ -0.22
BRAT1-206ENST00000493232 MIR17HGQ75NE6 70 aa13.65□□□□□ -0.22
BRAT1-206ENST00000493232 DPRXA6NFQ7 191 aa13.64□□□□□ -0.23
BRAT1-206ENST00000493232 LEPP41159 167 aa13.64□□□□□ -0.23
BRAT1-206ENST00000493232 TNFRSF14Q92956 283 aa13.64□□□□□ -0.23
BRAT1-206ENST00000493232 ASCL2Q99929 193 aa13.64□□□□□ -0.23
BRAT1-206ENST00000493232 NEUROG1Q92886 237 aa13.64□□□□□ -0.23
BRAT1-206ENST00000493232 NTN3O00634 580 aaPredicted RBP13.64□□□□□ -0.23
BRAT1-206ENST00000493232 APOHP02749 345 aaPredicted RBP13.64□□□□□ -0.23
BRAT1-206ENST00000493232 C18orf12Q96KH6 178 aa13.64□□□□□ -0.23
BRAT1-206ENST00000493232 DUSP14O95147 198 aaKnown RBP13.64□□□□□ -0.23
BRAT1-206ENST00000493232 SMIM13P0DJ93 91 aa13.64□□□□□ -0.23
BRAT1-206ENST00000493232 MORN2Q502X0 79 aa13.64□□□□□ -0.23
BRAT1-206ENST00000493232 TBX6O95947 436 aaPredicted RBP13.63□□□□□ -0.23
BRAT1-206ENST00000493232 DEPPQ9NTK1 212 aa13.63□□□□□ -0.23
BRAT1-206ENST00000493232 TTC9CQ8N5M4 171 aa13.63□□□□□ -0.23
BRAT1-206ENST00000493232 FAM90A9PA6NNJ1 464 aa13.63□□□□□ -0.23
BRAT1-206ENST00000493232 HOXA5P20719 270 aa13.63□□□□□ -0.23
BRAT1-206ENST00000493232 RNASE4P34096 147 aaKnown RBP13.63□□□□□ -0.23
BRAT1-206ENST00000493232 ZNF600Q6ZNG1 722 aa13.63□□□□□ -0.23
BRAT1-206ENST00000493232 DMRT1Q9Y5R6 373 aa13.63□□□□□ -0.23
BRAT1-206ENST00000493232 A0A087WWC5 75 aa13.63□□□□□ -0.23
BRAT1-206ENST00000493232 IZUMO1RA6ND01 250 aa13.63□□□□□ -0.23
BRAT1-206ENST00000493232 IGHV3-11P01762 117 aa13.63□□□□□ -0.23
BRAT1-206ENST00000493232 ATP5G3P48201 142 aa13.63□□□□□ -0.23
BRAT1-206ENST00000493232 ORMDL3Q8N138 153 aa13.63□□□□□ -0.23
BRAT1-206ENST00000493232 TRAV8-6A0A0B4J262 113 aa13.62□□□□□ -0.23
BRAT1-206ENST00000493232 SLC17A3O00476 420 aa13.62□□□□□ -0.23
BRAT1-206ENST00000493232 TRGV2A0A075B6R0 118 aa13.62□□□□□ -0.23
BRAT1-206ENST00000493232 IGHV1-18A0A0C4DH31 117 aa13.62□□□□□ -0.23
BRAT1-206ENST00000493232 DSCR9P59020 149 aa13.62□□□□□ -0.23
BRAT1-206ENST00000493232 LEMD1Q68G75 181 aa13.62□□□□□ -0.23
BRAT1-206ENST00000493232 PARD6GQ9BYG4 376 aaPredicted RBP13.62□□□□□ -0.23
BRAT1-206ENST00000493232 FABP5P3A8MUU1 101 aa13.62□□□□□ -0.23
BRAT1-206ENST00000493232 ATOH7Q8N100 152 aa13.62□□□□□ -0.23
BRAT1-206ENST00000493232 TMEM167AQ8TBQ9 72 aa13.62□□□□□ -0.23
BRAT1-206ENST00000493232 C18orf15Q96N68 181 aa13.62□□□□□ -0.23
BRAT1-206ENST00000493232 PTPRFP10586 1907 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms