RNA–Protein interactions for RNA: ENST00000492423.5

COPS7B-222, Transcript of COP9 signalosome subunit 7B, human

TSL 2

Gene COPS7B, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COPS7B-222	ENST00000492423	STRAP	Q9Y3F4	350 aa	Known RBP	11.78	□□□□□ -0.52
COPS7B-222	ENST00000492423	FBXO7	Q9Y3I1	522 aa		11.78	□□□□□ -0.52
COPS7B-222	ENST00000492423	NF1	P21359	2839 aa		11.77	□□□□□ -0.53
COPS7B-222	ENST00000492423	HOXA3	O43365	443 aa	Predicted RBP	11.77	□□□□□ -0.53
COPS7B-222	ENST00000492423	CST7	O76096	145 aa		11.77	□□□□□ -0.53
COPS7B-222	ENST00000492423	AREG	P15514	252 aa		11.77	□□□□□ -0.53
COPS7B-222	ENST00000492423	NPY1R	P25929	384 aa		11.77	□□□□□ -0.53
COPS7B-222	ENST00000492423	SULT1A1	P50225	295 aa		11.77	□□□□□ -0.53
COPS7B-222	ENST00000492423	SRSF8	Q9BRL6	282 aa	Known RBP	11.77	□□□□□ -0.53
COPS7B-222	ENST00000492423	FAM103A1	Q9BTL3	118 aa	Known RBP	11.77	□□□□□ -0.53
COPS7B-222	ENST00000492423	WFDC1	Q9HC57	220 aa		11.77	□□□□□ -0.53
COPS7B-222	ENST00000492423	VPREB3	Q9UKI3	123 aa		11.77	□□□□□ -0.53
COPS7B-222	ENST00000492423	ZNF469	Q96JG9	3925 aa	Predicted RBP	11.76	□□□□□ -0.53
COPS7B-222	ENST00000492423	PRSS46	E5RG02	174 aa		11.76	□□□□□ -0.53
COPS7B-222	ENST00000492423	CNIH1	O95406	144 aa		11.76	□□□□□ -0.53
COPS7B-222	ENST00000492423	IFNA10	P01566	189 aa		11.76	□□□□□ -0.53
COPS7B-222	ENST00000492423	EGR2	P11161	476 aa	Predicted RBP	11.76	□□□□□ -0.53
COPS7B-222	ENST00000492423	BAX	Q07812	192 aa		11.76	□□□□□ -0.53
COPS7B-222	ENST00000492423	KRTAP21-3	Q3LHN1	58 aa		11.76	□□□□□ -0.53
COPS7B-222	ENST00000492423	C2orf83	Q53S99	150 aa		11.76	□□□□□ -0.53
COPS7B-222	ENST00000492423	ASPHD1	Q5U4P2	390 aa		11.76	□□□□□ -0.53
COPS7B-222	ENST00000492423	STX12	Q86Y82	276 aa		11.76	□□□□□ -0.53
COPS7B-222	ENST00000492423	ZNF114	Q8NC26	417 aa		11.76	□□□□□ -0.53
COPS7B-222	ENST00000492423	SSMEM1	Q8WWF3	244 aa		11.76	□□□□□ -0.53
COPS7B-222	ENST00000492423	ARPC5L	Q9BPX5	153 aa		11.76	□□□□□ -0.53
COPS7B-222	ENST00000492423	SMIM3	Q9BZL3	60 aa		11.76	□□□□□ -0.53
COPS7B-222	ENST00000492423	GSX1	Q9H4S2	264 aa	Predicted RBP	11.76	□□□□□ -0.53
COPS7B-222	ENST00000492423	ZC4H2	Q9NQZ6	224 aa		11.76	□□□□□ -0.53
COPS7B-222	ENST00000492423	CYTL1	Q9NRR1	136 aa		11.76	□□□□□ -0.53
COPS7B-222	ENST00000492423		U3KQ87	197 aa		11.76	□□□□□ -0.53
COPS7B-222	ENST00000492423	ACAN	P16112	2415 aa		11.76	□□□□□ -0.53
COPS7B-222	ENST00000492423	BTBD17	A6NE02	478 aa		11.75	□□□□□ -0.53
COPS7B-222	ENST00000492423		M0QZK8	103 aa		11.75	□□□□□ -0.53
COPS7B-222	ENST00000492423	REG1A	P05451	166 aa		11.75	□□□□□ -0.53
COPS7B-222	ENST00000492423	APELA	P0DMC3	54 aa		11.75	□□□□□ -0.53
COPS7B-222	ENST00000492423	OR13C7	P0DN81	318 aa		11.75	□□□□□ -0.53
COPS7B-222	ENST00000492423	HTR2B	P41595	481 aa		11.75	□□□□□ -0.53
COPS7B-222	ENST00000492423	ERH	P84090	104 aa	Known RBP	11.75	□□□□□ -0.53
COPS7B-222	ENST00000492423	C19orf35	Q6ZS72	473 aa		11.75	□□□□□ -0.53
COPS7B-222	ENST00000492423	ABHD5	Q8WTS1	349 aa		11.75	□□□□□ -0.53
COPS7B-222	ENST00000492423	TNFRSF19	Q9NS68	423 aa		11.75	□□□□□ -0.53
COPS7B-222	ENST00000492423	PAIP2B	Q9ULR5	123 aa	Known RBP	11.75	□□□□□ -0.53
COPS7B-222	ENST00000492423	ZAN	Q9Y493	2812 aa		11.75	□□□□□ -0.53
COPS7B-222	ENST00000492423	KANTR	A0A1W2PQU2	76 aa		11.74	□□□□□ -0.53
COPS7B-222	ENST00000492423	LINC01548	A6NM66	108 aa		11.74	□□□□□ -0.53
COPS7B-222	ENST00000492423	ATP6V0E1	O15342	81 aa		11.74	□□□□□ -0.53
COPS7B-222	ENST00000492423	OR8U8	P0C7N1	319 aa		11.74	□□□□□ -0.53
COPS7B-222	ENST00000492423	MFAP2	P55001	183 aa		11.74	□□□□□ -0.53
COPS7B-222	ENST00000492423	RPP30	P78346	268 aa	Known RBP	11.74	□□□□□ -0.53
COPS7B-222	ENST00000492423	PVRIG	Q6DKI7	326 aa		11.74	□□□□□ -0.53
COPS7B-222	ENST00000492423	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	11.74	□□□□□ -0.53
COPS7B-222	ENST00000492423	MRPL41	Q8IXM3	137 aa	Known RBP	11.74	□□□□□ -0.53
COPS7B-222	ENST00000492423	TMEM86B	Q8N661	226 aa		11.74	□□□□□ -0.53
COPS7B-222	ENST00000492423	TMEM217	Q8N7C4	229 aa		11.74	□□□□□ -0.53
COPS7B-222	ENST00000492423	OR5C1	Q8NGR4	320 aa		11.74	□□□□□ -0.53
COPS7B-222	ENST00000492423	P2RX4	Q99571	388 aa		11.74	□□□□□ -0.53
COPS7B-222	ENST00000492423	PARP11	Q9NR21	331 aa		11.74	□□□□□ -0.53
COPS7B-222	ENST00000492423	SETD2	Q9BYW2	2564 aa	Predicted RBP	11.74	□□□□□ -0.53
COPS7B-222	ENST00000492423	FAM181B	A6NEQ2	426 aa		11.73	□□□□□ -0.53
COPS7B-222	ENST00000492423	TAAR5	O14804	337 aa		11.73	□□□□□ -0.53
COPS7B-222	ENST00000492423	CTRB1	P17538	263 aa		11.73	□□□□□ -0.53
COPS7B-222	ENST00000492423	MTOR	P42345	2549 aa		11.73	□□□□□ -0.53
COPS7B-222	ENST00000492423	CRIP2	P52943	208 aa	Predicted RBP	11.73	□□□□□ -0.53
COPS7B-222	ENST00000492423	RAB11A	P62491	216 aa		11.73	□□□□□ -0.53
COPS7B-222	ENST00000492423	IFITM2	Q01629	132 aa		11.73	□□□□□ -0.53
COPS7B-222	ENST00000492423	SLC38A11	Q08AI6	406 aa		11.73	□□□□□ -0.53
COPS7B-222	ENST00000492423	CLINT1	Q14677	625 aa		11.73	□□□□□ -0.53
COPS7B-222	ENST00000492423	CTRB2	Q6GPI1	263 aa		11.73	□□□□□ -0.53
COPS7B-222	ENST00000492423	OR8G2P	Q6IF36	304 aa		11.73	□□□□□ -0.53
COPS7B-222	ENST00000492423	ETV3L	Q6ZN32	361 aa		11.73	□□□□□ -0.53
COPS7B-222	ENST00000492423		Q6ZS46	218 aa		11.73	□□□□□ -0.53
COPS7B-222	ENST00000492423		Q71RC1	249 aa	Predicted RBP	11.73	□□□□□ -0.53
COPS7B-222	ENST00000492423	OR1S2	Q8NGQ3	325 aa		11.73	□□□□□ -0.53
COPS7B-222	ENST00000492423	SGMS2	Q8NHU3	365 aa		11.73	□□□□□ -0.53
COPS7B-222	ENST00000492423	DMRT1	Q9Y5R6	373 aa		11.73	□□□□□ -0.53
COPS7B-222	ENST00000492423	F11R	Q9Y624	299 aa	Known RBP	11.73	□□□□□ -0.53
COPS7B-222	ENST00000492423	DNAJC9-AS1	A6NH13	148 aa		11.72	□□□□□ -0.53
COPS7B-222	ENST00000492423	SCAF4	O95104	1147 aa	Known RBP	11.72	□□□□□ -0.53
COPS7B-222	ENST00000492423	IGHG2	P01859	326 aa		11.72	□□□□□ -0.53
COPS7B-222	ENST00000492423	SRD5A1	P18405	259 aa		11.72	□□□□□ -0.53
COPS7B-222	ENST00000492423	C4BPB	P20851	252 aa		11.72	□□□□□ -0.53
COPS7B-222	ENST00000492423	SNCA	P37840	140 aa		11.72	□□□□□ -0.53
COPS7B-222	ENST00000492423	ATP5I	P56385	69 aa	Predicted RBP	11.72	□□□□□ -0.53
COPS7B-222	ENST00000492423	BLCAP	P62952	87 aa		11.72	□□□□□ -0.53
COPS7B-222	ENST00000492423	C19orf54	Q5BKX5	351 aa		11.72	□□□□□ -0.53
COPS7B-222	ENST00000492423	C9orf152	Q5JTZ5	239 aa		11.72	□□□□□ -0.53
COPS7B-222	ENST00000492423	RPL7L1	Q6DKI1	246 aa	Known RBP	11.72	□□□□□ -0.53
COPS7B-222	ENST00000492423	ATP5S	Q99766	215 aa		11.72	□□□□□ -0.53
COPS7B-222	ENST00000492423	ZNF471	Q9BX82	626 aa	Predicted RBP	11.72	□□□□□ -0.53
COPS7B-222	ENST00000492423	CDC42EP3	Q9UKI2	254 aa		11.72	□□□□□ -0.53
COPS7B-222	ENST00000492423	NPIPB5	A8MRT5	1133 aa		11.71	□□□□□ -0.53
COPS7B-222	ENST00000492423	FBXO24	O75426	580 aa		11.71	□□□□□ -0.53
COPS7B-222	ENST00000492423	CRYGC	P07315	174 aa		11.71	□□□□□ -0.53
COPS7B-222	ENST00000492423	HBG1	P69891	147 aa		11.71	□□□□□ -0.53
COPS7B-222	ENST00000492423	HBG2	P69892	147 aa		11.71	□□□□□ -0.53
COPS7B-222	ENST00000492423	DLK1	P80370	383 aa		11.71	□□□□□ -0.53
COPS7B-222	ENST00000492423	VWC2	Q2TAL6	325 aa		11.71	□□□□□ -0.53
COPS7B-222	ENST00000492423	SLC51B	Q86UW2	128 aa		11.71	□□□□□ -0.53
COPS7B-222	ENST00000492423	TTC9C	Q8N5M4	171 aa		11.71	□□□□□ -0.53
COPS7B-222	ENST00000492423	LFNG	Q8NES3	379 aa		11.71	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms