RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 PPP5D1E7EU14 171 aa7.63□□□□□ -1.19
BRCA1-219ENST00000491747 PSPNO60542 156 aa7.63□□□□□ -1.19
BRCA1-219ENST00000491747 HAND1O96004 215 aa7.63□□□□□ -1.19
BRCA1-219ENST00000491747 IAPPP10997 89 aa7.63□□□□□ -1.19
BRCA1-219ENST00000491747 MEF2BQ02080 365 aaPredicted RBP7.63□□□□□ -1.19
BRCA1-219ENST00000491747 ZNF146Q15072 292 aa7.63□□□□□ -1.19
BRCA1-219ENST00000491747 ADIRFQ15847 76 aa7.63□□□□□ -1.19
BRCA1-219ENST00000491747 TMEM241Q24JQ0 296 aa7.63□□□□□ -1.19
BRCA1-219ENST00000491747 KRTAP24-1Q3LI83 254 aa7.63□□□□□ -1.19
BRCA1-219ENST00000491747 Q6ZRM9 215 aa7.63□□□□□ -1.19
BRCA1-219ENST00000491747 VMO1Q7Z5L0 202 aa7.63□□□□□ -1.19
BRCA1-219ENST00000491747 Q8IYB0 196 aa7.63□□□□□ -1.19
BRCA1-219ENST00000491747 LHX4Q969G2 390 aa7.63□□□□□ -1.19
BRCA1-219ENST00000491747 ESM1Q9NQ30 184 aa7.63□□□□□ -1.19
BRCA1-219ENST00000491747 SLC39A9Q9NUM3 307 aa7.63□□□□□ -1.19
BRCA1-219ENST00000491747 LIN7CQ9NUP9 197 aaKnown RBP7.63□□□□□ -1.19
BRCA1-219ENST00000491747 A0A1B0GV90 55 aa7.63□□□□□ -1.19
BRCA1-219ENST00000491747 MDFIC2A0A1B0GVS7 189 aa7.63□□□□□ -1.19
BRCA1-219ENST00000491747 NPIPB11E5RHQ5 1161 aa7.63□□□□□ -1.19
BRCA1-219ENST00000491747 TMEM250H0YL14 139 aa7.63□□□□□ -1.19
BRCA1-219ENST00000491747 TCF21O43680 179 aa7.63□□□□□ -1.19
BRCA1-219ENST00000491747 KBTBD11O94819 623 aa7.63□□□□□ -1.19
BRCA1-219ENST00000491747 IZUMO4Q1ZYL8 232 aa7.63□□□□□ -1.19
BRCA1-219ENST00000491747 TMEM200BQ69YZ2 307 aa7.63□□□□□ -1.19
BRCA1-219ENST00000491747 C11orf42Q8N5U0 333 aa7.63□□□□□ -1.19
BRCA1-219ENST00000491747 IL1F10Q8WWZ1 152 aa7.63□□□□□ -1.19
BRCA1-219ENST00000491747 SSX3Q99909 188 aa7.63□□□□□ -1.19
BRCA1-219ENST00000491747 PYGO2Q9BRQ0 406 aa7.63□□□□□ -1.19
BRCA1-219ENST00000491747 PRO1933Q9H354 126 aa7.63□□□□□ -1.19
BRCA1-219ENST00000491747 TIMM9Q9Y5J7 89 aa7.63□□□□□ -1.19
BRCA1-219ENST00000491747 FAM90A26D6RGX4 464 aa7.62□□□□□ -1.19
BRCA1-219ENST00000491747 H7BYZ3 331 aa7.62□□□□□ -1.19
BRCA1-219ENST00000491747 SLC31A2O15432 143 aa7.62□□□□□ -1.19
BRCA1-219ENST00000491747 PFN1P07737 140 aaKnown RBP7.62□□□□□ -1.19
BRCA1-219ENST00000491747 PSMB3P49720 205 aa7.62□□□□□ -1.19
BRCA1-219ENST00000491747 ELLP55199 621 aaPredicted RBP7.62□□□□□ -1.19
BRCA1-219ENST00000491747 FAM3BP58499 235 aaPredicted RBP7.62□□□□□ -1.19
BRCA1-219ENST00000491747 TAS2R60P59551 318 aa7.62□□□□□ -1.19
BRCA1-219ENST00000491747 ARL16Q0P5N6 197 aa7.62□□□□□ -1.19
BRCA1-219ENST00000491747 KLRD1Q13241 179 aa7.62□□□□□ -1.19
BRCA1-219ENST00000491747 BSXQ3C1V8 233 aa7.62□□□□□ -1.19
BRCA1-219ENST00000491747 Q3ZCU0 254 aa7.62□□□□□ -1.19
BRCA1-219ENST00000491747 COA6Q5JTJ3 125 aaKnown RBP7.62□□□□□ -1.19
BRCA1-219ENST00000491747 SPANXN5Q5MJ07 72 aa7.62□□□□□ -1.19
BRCA1-219ENST00000491747 Q6P435 159 aa7.62□□□□□ -1.19
BRCA1-219ENST00000491747 SSX7Q7RTT5 188 aa7.62□□□□□ -1.19
BRCA1-219ENST00000491747 SIGLECL1Q8N7X8 197 aa7.62□□□□□ -1.19
BRCA1-219ENST00000491747 OR1P1Q8NH06 330 aa7.62□□□□□ -1.19
BRCA1-219ENST00000491747 TAF15Q92804 592 aaKnown RBP eCLIP7.62□□□□□ -1.196e-6■□□□□ 11.2
BRCA1-219ENST00000491747 TNFRSF14Q92956 283 aa7.62□□□□□ -1.19
BRCA1-219ENST00000491747 ACY3Q96HD9 319 aa7.62□□□□□ -1.19
BRCA1-219ENST00000491747 NOL4LQ96MY1 436 aaPredicted RBP7.62□□□□□ -1.19
BRCA1-219ENST00000491747 ACTR3CQ9C0K3 210 aaPredicted RBP7.62□□□□□ -1.19
BRCA1-219ENST00000491747 FAM234AQ9H0X4 552 aa7.62□□□□□ -1.19
BRCA1-219ENST00000491747 GAB2Q9UQC2 676 aa7.62□□□□□ -1.19
BRCA1-219ENST00000491747 RBM7Q9Y580 266 aaKnown RBP7.62□□□□□ -1.19
BRCA1-219ENST00000491747 SIRPB1O00241 398 aa7.62□□□□□ -1.19
BRCA1-219ENST00000491747 OR2H2O95918 312 aa7.62□□□□□ -1.19
BRCA1-219ENST00000491747 AMBPP02760 352 aa7.62□□□□□ -1.19
BRCA1-219ENST00000491747 GZMBP10144 247 aa7.62□□□□□ -1.19
BRCA1-219ENST00000491747 CCL3L1P16619 93 aa7.62□□□□□ -1.19
BRCA1-219ENST00000491747 C9orf139Q6ZV77 190 aa7.62□□□□□ -1.19
BRCA1-219ENST00000491747 MOB1BQ7L9L4 216 aa7.62□□□□□ -1.19
BRCA1-219ENST00000491747 TCF23Q7RTU1 214 aa7.62□□□□□ -1.19
BRCA1-219ENST00000491747 C16orf82Q7Z2V1 217 aa7.62□□□□□ -1.19
BRCA1-219ENST00000491747 KIR3DL3Q8N743 410 aa7.62□□□□□ -1.19
BRCA1-219ENST00000491747 TPRX1Q8N7U7 411 aa7.62□□□□□ -1.19
BRCA1-219ENST00000491747 OR51G1Q8NGK1 321 aa7.62□□□□□ -1.19
BRCA1-219ENST00000491747 OR4C12Q96R67 309 aa7.62□□□□□ -1.19
BRCA1-219ENST00000491747 TRAV24A0A0B4J272 114 aa7.61□□□□□ -1.19
BRCA1-219ENST00000491747 UBE2L5PA0A1B0GUS4 154 aa7.61□□□□□ -1.19
BRCA1-219ENST00000491747 GCGP01275 180 aa7.61□□□□□ -1.19
BRCA1-219ENST00000491747 IGKV1-39P01597 117 aa7.61□□□□□ -1.19
BRCA1-219ENST00000491747 IGKV1-5P01602 117 aa7.61□□□□□ -1.19
BRCA1-219ENST00000491747 IGKV1D-39P04432 117 aa7.61□□□□□ -1.19
BRCA1-219ENST00000491747 GALR1P47211 349 aa7.61□□□□□ -1.19
BRCA1-219ENST00000491747 OR3A1P47881 315 aa7.61□□□□□ -1.19
BRCA1-219ENST00000491747 HILS1P60008 231 aa7.61□□□□□ -1.19
BRCA1-219ENST00000491747 RPL31P62899 125 aaKnown RBP7.61□□□□□ -1.19
BRCA1-219ENST00000491747 SLC38A11Q08AI6 406 aa7.61□□□□□ -1.19
BRCA1-219ENST00000491747 HCP5Q6MZN7 132 aa7.61□□□□□ -1.19
BRCA1-219ENST00000491747 ZNF66Q6ZN08 573 aa7.61□□□□□ -1.19
BRCA1-219ENST00000491747 HAPLN4Q86UW8 402 aa7.61□□□□□ -1.19
BRCA1-219ENST00000491747 PNKDQ8N490 385 aa7.61□□□□□ -1.19
BRCA1-219ENST00000491747 PIP4P2Q8N4L2 257 aa7.61□□□□□ -1.19
BRCA1-219ENST00000491747 ZNF418Q8TF45 676 aaPredicted RBP7.61□□□□□ -1.19
BRCA1-219ENST00000491747 RAB24Q969Q5 203 aa7.61□□□□□ -1.19
BRCA1-219ENST00000491747 ATRQ13535 2644 aa7.61□□□□□ -1.19
BRCA1-219ENST00000491747 IGHV1-69DA0A0B4J2H0 117 aa7.61□□□□□ -1.19
BRCA1-219ENST00000491747 XKRY2A2RUG3 117 aa7.61□□□□□ -1.19
BRCA1-219ENST00000491747 RNF212BA8MTL3 300 aa7.61□□□□□ -1.19
BRCA1-219ENST00000491747 SH2D1BO14796 132 aa7.61□□□□□ -1.19
BRCA1-219ENST00000491747 HRASP01112 189 aa7.61□□□□□ -1.19
BRCA1-219ENST00000491747 IGHV1-69P01742 117 aa7.61□□□□□ -1.19
BRCA1-219ENST00000491747 MBP02144 154 aa7.61□□□□□ -1.19
BRCA1-219ENST00000491747 MDKP21741 143 aaPredicted RBP7.61□□□□□ -1.19
BRCA1-219ENST00000491747 DLX6P56179 175 aa7.61□□□□□ -1.19
BRCA1-219ENST00000491747 RPL23P62829 140 aaKnown RBP7.61□□□□□ -1.19
BRCA1-219ENST00000491747 DEFB112Q30KQ8 113 aa7.61□□□□□ -1.19
BRCA1-219ENST00000491747 CENPVQ7Z7K6 275 aaPredicted RBP7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms