RNA–Protein interactions for RNA: ENST00000491521.1

CDK9-204, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-204ENST00000491521 MRAPQ8TCY5 172 aa10.69□□□□□ -0.7
CDK9-204ENST00000491521 ARPC1AQ92747 370 aa10.69□□□□□ -0.7
CDK9-204ENST00000491521 HSPB9Q9BQS6 159 aa10.69□□□□□ -0.7
CDK9-204ENST00000491521 RBKSQ9H477 322 aa10.69□□□□□ -0.7
CDK9-204ENST00000491521 ZFP57Q9NU63 452 aa10.69□□□□□ -0.7
CDK9-204ENST00000491521 ZNF257Q9Y2Q1 563 aa10.69□□□□□ -0.7
CDK9-204ENST00000491521 IGHV7-81A0A0B4J1V7 117 aa10.68□□□□□ -0.7
CDK9-204ENST00000491521 FAM90A26D6RGX4 464 aa10.68□□□□□ -0.7
CDK9-204ENST00000491521 L7N2F9 121 aa10.68□□□□□ -0.7
CDK9-204ENST00000491521 SYNGR2O43760 224 aa10.68□□□□□ -0.7
CDK9-204ENST00000491521 PFDN1O60925 122 aa10.68□□□□□ -0.7
CDK9-204ENST00000491521 APELAP0DMC3 54 aa10.68□□□□□ -0.7
CDK9-204ENST00000491521 PSMB6P28072 239 aa10.68□□□□□ -0.7
CDK9-204ENST00000491521 POLR2GP62487 172 aaKnown RBP eCLIP10.68□□□□□ -0.7
CDK9-204ENST00000491521 VAMP2P63027 116 aa10.68□□□□□ -0.7
CDK9-204ENST00000491521 C18orf65Q6ZTR6 163 aa10.68□□□□□ -0.7
CDK9-204ENST00000491521 PPP1R1CQ8WVI7 109 aa10.68□□□□□ -0.7
CDK9-204ENST00000491521 SRSF12Q8WXF0 261 aaKnown RBP10.68□□□□□ -0.7
CDK9-204ENST00000491521 ASB13Q8WXK3 278 aa10.68□□□□□ -0.7
CDK9-204ENST00000491521 FAM103A1Q9BTL3 118 aaKnown RBP10.68□□□□□ -0.7
CDK9-204ENST00000491521 PLEKHA3Q9HB20 300 aa10.68□□□□□ -0.7
CDK9-204ENST00000491521 RANGRFQ9HD47 186 aaPredicted RBP10.68□□□□□ -0.7
CDK9-204ENST00000491521 HEYLQ9NQ87 328 aaPredicted RBP10.68□□□□□ -0.7
CDK9-204ENST00000491521 AURKAIP1Q9NWT8 199 aaPredicted RBP10.68□□□□□ -0.7
CDK9-204ENST00000491521 HSPB7Q9UBY9 170 aa10.68□□□□□ -0.7
CDK9-204ENST00000491521 A0A1W2PN81 502 aa10.67□□□□□ -0.7
CDK9-204ENST00000491521 E7EUB6 86 aa10.67□□□□□ -0.7
CDK9-204ENST00000491521 SSSCA1O60232 199 aa10.67□□□□□ -0.7
CDK9-204ENST00000491521 IAPPP10997 89 aa10.67□□□□□ -0.7
CDK9-204ENST00000491521 PVALBP20472 110 aaPredicted RBP10.67□□□□□ -0.7
CDK9-204ENST00000491521 CHRNA7P36544 502 aa10.67□□□□□ -0.7
CDK9-204ENST00000491521 RPL23AP62750 156 aaKnown RBP10.67□□□□□ -0.7
CDK9-204ENST00000491521 SLC35B1P78383 322 aa10.67□□□□□ -0.7
CDK9-204ENST00000491521 PRCDQ00LT1 54 aa10.67□□□□□ -0.7
CDK9-204ENST00000491521 AARDQ4LEZ3 155 aa10.67□□□□□ -0.7
CDK9-204ENST00000491521 C8orf86Q6ZUL3 223 aa10.67□□□□□ -0.7
CDK9-204ENST00000491521 MRPL41Q8IXM3 137 aaKnown RBP10.67□□□□□ -0.7
CDK9-204ENST00000491521 KLHL30-AS1Q8NEE0 82 aa10.67□□□□□ -0.7
CDK9-204ENST00000491521 OR10W1Q8NGF6 305 aa10.67□□□□□ -0.7
CDK9-204ENST00000491521 OR2T35Q8NGX2 323 aa10.67□□□□□ -0.7
CDK9-204ENST00000491521 DTD1Q8TEA8 209 aa10.67□□□□□ -0.7
CDK9-204ENST00000491521 HIPK2Q9H2X6 1198 aa10.67□□□□□ -0.7
CDK9-204ENST00000491521 NDUFA4L2Q9NRX3 87 aa10.67□□□□□ -0.7
CDK9-204ENST00000491521 RCL1Q9Y2P8 373 aaKnown RBP10.67□□□□□ -0.7
CDK9-204ENST00000491521 K7EPK0 472 aa10.66□□□□□ -0.7
CDK9-204ENST00000491521 ATP6V0E1O15342 81 aa10.66□□□□□ -0.7
CDK9-204ENST00000491521 IGHG2P01859 326 aa10.66□□□□□ -0.7
CDK9-204ENST00000491521 SSBP2P81877 361 aaPredicted RBP10.66□□□□□ -0.7
CDK9-204ENST00000491521 ERHP84090 104 aaKnown RBP10.66□□□□□ -0.7
CDK9-204ENST00000491521 FGL1Q08830 312 aa10.66□□□□□ -0.7
CDK9-204ENST00000491521 TMEM267Q0VDI3 215 aaPredicted RBP10.66□□□□□ -0.7
CDK9-204ENST00000491521 IL15RAQ13261 267 aa10.66□□□□□ -0.7
CDK9-204ENST00000491521 LCNL1Q6ZST4 164 aa10.66□□□□□ -0.7
CDK9-204ENST00000491521 REC114Q7Z4M0 266 aa10.66□□□□□ -0.7
CDK9-204ENST00000491521 STPG2Q8N412 459 aa10.66□□□□□ -0.7
CDK9-204ENST00000491521 LFNGQ8NES3 379 aa10.66□□□□□ -0.7
CDK9-204ENST00000491521 THAP6Q8TBB0 222 aa10.66□□□□□ -0.7
CDK9-204ENST00000491521 DUX3Q96PT4 197 aa10.66□□□□□ -0.7
CDK9-204ENST00000491521 WSB1Q9Y6I7 421 aa10.66□□□□□ -0.7
CDK9-204ENST00000491521 CGB1A6NKQ9 187 aa10.65□□□□□ -0.7
CDK9-204ENST00000491521 SMLR1H3BR10 107 aa10.65□□□□□ -0.7
CDK9-204ENST00000491521 MPC2O95563 127 aa10.65□□□□□ -0.7
CDK9-204ENST00000491521 REG1AP05451 166 aa10.65□□□□□ -0.7
CDK9-204ENST00000491521 PET100P0DJ07 73 aa10.65□□□□□ -0.7
CDK9-204ENST00000491521 OR13C7P0DN81 318 aa10.65□□□□□ -0.7
CDK9-204ENST00000491521 HOXD3P31249 432 aaPredicted RBP10.65□□□□□ -0.7
CDK9-204ENST00000491521 SNCAP37840 140 aa10.65□□□□□ -0.7
CDK9-204ENST00000491521 NDPQ00604 133 aa10.65□□□□□ -0.7
CDK9-204ENST00000491521 ECSCRQ19T08 205 aa10.65□□□□□ -0.7
CDK9-204ENST00000491521 UNQ5815/PRO19632Q6UWF5 114 aa10.65□□□□□ -0.7
CDK9-204ENST00000491521 WFDC9Q8NEX5 89 aa10.65□□□□□ -0.7
CDK9-204ENST00000491521 ST6GAL2Q96JF0 529 aa10.65□□□□□ -0.7
CDK9-204ENST00000491521 CIB3Q96Q77 187 aaPredicted RBP10.65□□□□□ -0.7
CDK9-204ENST00000491521 RAB40CQ96S21 281 aa10.65□□□□□ -0.7
CDK9-204ENST00000491521 PSENENQ9NZ42 101 aa10.65□□□□□ -0.7
CDK9-204ENST00000491521 PAIP2BQ9ULR5 123 aaKnown RBP10.65□□□□□ -0.7
CDK9-204ENST00000491521 TRAV41A0A0B4J266 112 aa10.64□□□□□ -0.71
CDK9-204ENST00000491521 A0A1B0GW64 132 aa10.64□□□□□ -0.71
CDK9-204ENST00000491521 TEX22C9J3V5 150 aa10.64□□□□□ -0.71
CDK9-204ENST00000491521 AP4M1O00189 453 aa10.64□□□□□ -0.71
CDK9-204ENST00000491521 DEDDO75618 318 aa10.64□□□□□ -0.71
CDK9-204ENST00000491521 IFNA10P01566 189 aa10.64□□□□□ -0.71
CDK9-204ENST00000491521 EGR2P11161 476 aaPredicted RBP10.64□□□□□ -0.71
CDK9-204ENST00000491521 AREGP15514 252 aa10.64□□□□□ -0.71
CDK9-204ENST00000491521 RPP30P78346 268 aaKnown RBP10.64□□□□□ -0.71
CDK9-204ENST00000491521 Q5BKY6 102 aa10.64□□□□□ -0.71
CDK9-204ENST00000491521 C11orf87Q6NUJ2 197 aa10.64□□□□□ -0.71
CDK9-204ENST00000491521 ETV3LQ6ZN32 361 aa10.64□□□□□ -0.71
CDK9-204ENST00000491521 HSD17B13Q7Z5P4 300 aaPredicted RBP10.64□□□□□ -0.71
CDK9-204ENST00000491521 LINC00482Q8N8I6 264 aa10.64□□□□□ -0.71
CDK9-204ENST00000491521 OR5T1Q8NG75 326 aa10.64□□□□□ -0.71
CDK9-204ENST00000491521 RCC1LQ96I51 464 aaKnown RBP10.64□□□□□ -0.71
CDK9-204ENST00000491521 SRSF8Q9BRL6 282 aaKnown RBP10.64□□□□□ -0.71
CDK9-204ENST00000491521 OR5AC2Q9NZP5 309 aa10.64□□□□□ -0.71
CDK9-204ENST00000491521 FBXO7Q9Y3I1 522 aa10.64□□□□□ -0.71
CDK9-204ENST00000491521 E5RGE8 158 aa10.63□□□□□ -0.71
CDK9-204ENST00000491521 H3BP45 60 aa10.63□□□□□ -0.71
CDK9-204ENST00000491521 LY86O95711 162 aa10.63□□□□□ -0.71
CDK9-204ENST00000491521 RPLP1P05386 114 aaKnown RBP10.63□□□□□ -0.71
CDK9-204ENST00000491521 DEFA4P12838 97 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms