RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 ELLP55199 621 aaPredicted RBP13.49□□□□□ -0.25
HMGN1-219ENST00000491183 MARC2Q969Z3 335 aa13.49□□□□□ -0.25
HMGN1-219ENST00000491183 TMEM56Q96MV1 263 aa13.49□□□□□ -0.25
HMGN1-219ENST00000491183 TSC22D3Q99576 134 aa13.49□□□□□ -0.25
HMGN1-219ENST00000491183 CHRDL1Q9BU40 450 aa13.49□□□□□ -0.25
HMGN1-219ENST00000491183 MIXL1Q9H2W2 232 aa13.49□□□□□ -0.25
HMGN1-219ENST00000491183 SRD5A3Q9H8P0 318 aa13.49□□□□□ -0.25
HMGN1-219ENST00000491183 C21orf62Q9NYP8 219 aa13.49□□□□□ -0.25
HMGN1-219ENST00000491183 MRPL27Q9P0M9 148 aaKnown RBP13.49□□□□□ -0.25
HMGN1-219ENST00000491183 MTFP1Q9UDX5 166 aa13.49□□□□□ -0.25
HMGN1-219ENST00000491183 PI3P19957 117 aa13.48□□□□□ -0.25
HMGN1-219ENST00000491183 ADMP35318 185 aa13.48□□□□□ -0.25
HMGN1-219ENST00000491183 RNASE10Q5GAN6 216 aaKnown RBP13.48□□□□□ -0.25
HMGN1-219ENST00000491183 ZFAND6Q6FIF0 208 aa13.48□□□□□ -0.25
HMGN1-219ENST00000491183 H2BFWTQ7Z2G1 175 aa13.48□□□□□ -0.25
HMGN1-219ENST00000491183 MRGPRFQ96AM1 343 aa13.48□□□□□ -0.25
HMGN1-219ENST00000491183 ISOC1Q96CN7 298 aa13.48□□□□□ -0.25
HMGN1-219ENST00000491183 ZNF414Q96IQ9 312 aa13.48□□□□□ -0.25
HMGN1-219ENST00000491183 UFC1Q9Y3C8 167 aa13.48□□□□□ -0.25
HMGN1-219ENST00000491183 IFNA6P05013 189 aa13.47□□□□□ -0.25
HMGN1-219ENST00000491183 RND3P61587 244 aa13.47□□□□□ -0.25
HMGN1-219ENST00000491183 IZUMO4Q1ZYL8 232 aa13.47□□□□□ -0.25
HMGN1-219ENST00000491183 OR2C3Q8N628 320 aa13.47□□□□□ -0.25
HMGN1-219ENST00000491183 OR4D10Q8NGI6 311 aa13.47□□□□□ -0.25
HMGN1-219ENST00000491183 OR52B4Q8NGK2 314 aa13.47□□□□□ -0.25
HMGN1-219ENST00000491183 OR4A16Q8NH70 328 aa13.47□□□□□ -0.25
HMGN1-219ENST00000491183 TMEM190Q8WZ59 177 aa13.47□□□□□ -0.25
HMGN1-219ENST00000491183 BSCL2Q96G97 398 aaPredicted RBP13.47□□□□□ -0.25
HMGN1-219ENST00000491183 ATP6V0BQ99437 205 aa13.47□□□□□ -0.25
HMGN1-219ENST00000491183 FAM110AQ9BQ89 295 aa13.47□□□□□ -0.25
HMGN1-219ENST00000491183 MRPS26Q9BYN8 205 aaKnown RBP13.47□□□□□ -0.25
HMGN1-219ENST00000491183 TRAV25A0A0B4J276 109 aa13.46□□□□□ -0.25
HMGN1-219ENST00000491183 PGAM2P15259 253 aa13.46□□□□□ -0.25
HMGN1-219ENST00000491183 HSPE1P61604 102 aaKnown RBP13.46□□□□□ -0.25
HMGN1-219ENST00000491183 SPSB3Q6PJ21 355 aa13.46□□□□□ -0.25
HMGN1-219ENST00000491183 SLC16A13Q7RTY0 426 aa13.46□□□□□ -0.25
HMGN1-219ENST00000491183 ARRDC1Q8N5I2 433 aa13.46□□□□□ -0.25
HMGN1-219ENST00000491183 OR1L6Q8NGR2 347 aa13.46□□□□□ -0.25
HMGN1-219ENST00000491183 OR1P1Q8NH06 330 aa13.46□□□□□ -0.25
HMGN1-219ENST00000491183 TP53RKQ96S44 253 aa13.46□□□□□ -0.25
HMGN1-219ENST00000491183 NDUFA4O00483 81 aa13.45□□□□□ -0.26
HMGN1-219ENST00000491183 CTDSP2O14595 271 aa13.45□□□□□ -0.26
HMGN1-219ENST00000491183 IGKV1-5P01602 117 aa13.45□□□□□ -0.26
HMGN1-219ENST00000491183 CD74P04233 296 aa13.45□□□□□ -0.26
HMGN1-219ENST00000491183 CTSGP08311 255 aa13.45□□□□□ -0.26
HMGN1-219ENST00000491183 TBPP20226 339 aa13.45□□□□□ -0.26
HMGN1-219ENST00000491183 PIGPP57054 158 aa13.45□□□□□ -0.26
HMGN1-219ENST00000491183 PRCDQ00LT1 54 aa13.45□□□□□ -0.26
HMGN1-219ENST00000491183 SPCS2Q15005 226 aa13.45□□□□□ -0.26
HMGN1-219ENST00000491183 GPR141Q7Z602 305 aa13.45□□□□□ -0.26
HMGN1-219ENST00000491183 TMEM229BQ8NBD8 167 aa13.45□□□□□ -0.26
HMGN1-219ENST00000491183 UBAC2Q8NBM4 344 aa13.45□□□□□ -0.26
HMGN1-219ENST00000491183 ZNF486Q96H40 463 aaPredicted RBP13.45□□□□□ -0.26
HMGN1-219ENST00000491183 C5orf66Q9H5L9 145 aa13.45□□□□□ -0.26
HMGN1-219ENST00000491183 GAR1Q9NY12 217 aaKnown RBP13.45□□□□□ -0.26
HMGN1-219ENST00000491183 IGHV3OR16-8A0A075B7F1 116 aa13.44□□□□□ -0.26
HMGN1-219ENST00000491183 I3L2K1 104 aa13.44□□□□□ -0.26
HMGN1-219ENST00000491183 P0C879 139 aa13.44□□□□□ -0.26
HMGN1-219ENST00000491183 ANKRD55Q3KP44 614 aa13.44□□□□□ -0.26
HMGN1-219ENST00000491183 Q56UQ5 140 aa13.44□□□□□ -0.26
HMGN1-219ENST00000491183 RBPMS2Q6ZRY4 209 aaKnown RBP13.44□□□□□ -0.26
HMGN1-219ENST00000491183 TERB2Q8NHR7 220 aa13.44□□□□□ -0.26
HMGN1-219ENST00000491183 DAZ1Q9NQZ3 744 aaKnown RBP13.44□□□□□ -0.26
HMGN1-219ENST00000491183 TENM2Q9NT68 2774 aa13.44□□□□□ -0.26
HMGN1-219ENST00000491183 A0A0B4J293 547 aa13.43□□□□□ -0.26
HMGN1-219ENST00000491183 K7EMT4 169 aa13.43□□□□□ -0.26
HMGN1-219ENST00000491183 ZNF207O43670 478 aaKnown RBP13.43□□□□□ -0.26
HMGN1-219ENST00000491183 PPP5CP53041 499 aa13.43□□□□□ -0.26
HMGN1-219ENST00000491183 SP6Q3SY56 376 aa13.43□□□□□ -0.26
HMGN1-219ENST00000491183 ZNF114Q8NC26 417 aa13.43□□□□□ -0.26
HMGN1-219ENST00000491183 C15orf40Q8WUR7 153 aa13.43□□□□□ -0.26
HMGN1-219ENST00000491183 MISP3Q96FF7 219 aa13.43□□□□□ -0.26
HMGN1-219ENST00000491183 C20orf24Q9BUV8 137 aa13.43□□□□□ -0.26
HMGN1-219ENST00000491183 C3orf85A0A1B0GTC6 90 aa13.42□□□□□ -0.26
HMGN1-219ENST00000491183 GABARAPH6UMI1 98 aa13.42□□□□□ -0.26
HMGN1-219ENST00000491183 RGS5O15539 181 aa13.42□□□□□ -0.26
HMGN1-219ENST00000491183 RAB3DO95716 219 aa13.42□□□□□ -0.26
HMGN1-219ENST00000491183 MT-CO2P00403 227 aa13.42□□□□□ -0.26
HMGN1-219ENST00000491183 IGHV3-48P01763 117 aa13.42□□□□□ -0.26
HMGN1-219ENST00000491183 MFAP4P55083 255 aa13.42□□□□□ -0.26
HMGN1-219ENST00000491183 TAS2R19P59542 299 aa13.42□□□□□ -0.26
HMGN1-219ENST00000491183 SPINK9Q5DT21 86 aa13.42□□□□□ -0.26
HMGN1-219ENST00000491183 STEAP1BQ6NZ63 245 aa13.42□□□□□ -0.26
HMGN1-219ENST00000491183 OR13C8Q8NGS7 320 aa13.42□□□□□ -0.26
HMGN1-219ENST00000491183 MARCH1Q8TCQ1 289 aa13.42□□□□□ -0.26
HMGN1-219ENST00000491183 DYNC2H1Q8NCM8 4307 aaKnown RBP13.41□□□□□ -0.26
HMGN1-219ENST00000491183 CSMD3Q7Z407 3707 aa13.41□□□□□ -0.26
HMGN1-219ENST00000491183 TSPAN4O14817 238 aa13.41□□□□□ -0.26
HMGN1-219ENST00000491183 FCGR2BP31994 310 aaPredicted RBP13.41□□□□□ -0.26
HMGN1-219ENST00000491183 ERHP84090 104 aaKnown RBP13.41□□□□□ -0.26
HMGN1-219ENST00000491183 SCGB2B2Q4G0G5 96 aa13.41□□□□□ -0.26
HMGN1-219ENST00000491183 ZFAND1Q8TCF1 268 aa13.41□□□□□ -0.26
HMGN1-219ENST00000491183 SPAG8Q99932 426 aaPredicted RBP13.41□□□□□ -0.26
HMGN1-219ENST00000491183 GGTLC1Q9BX51 225 aa13.41□□□□□ -0.26
HMGN1-219ENST00000491183 STARD9Q9P2P6 4700 aa13.41□□□□□ -0.26
HMGN1-219ENST00000491183 LOC102724200A0A096LPH7 203 aaPredicted RBP13.4□□□□□ -0.26
HMGN1-219ENST00000491183 A0A0G2JRQ6 117 aa13.4□□□□□ -0.26
HMGN1-219ENST00000491183 C15orf62A8K5M9 175 aa13.4□□□□□ -0.26
HMGN1-219ENST00000491183 ST8SIA3O43173 380 aa13.4□□□□□ -0.26
HMGN1-219ENST00000491183 FAAP20Q6NZ36 180 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms