RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 TMEM229BQ8NBD8 167 aa23.62■■□□□ 1.37
LDB1-204ENST00000490751 GABARAPH6UMI1 98 aa23.61■■□□□ 1.37
LDB1-204ENST00000490751 CD74P04233 296 aa23.61■■□□□ 1.37
LDB1-204ENST00000490751 OR1L6Q8NGR2 347 aa23.61■■□□□ 1.37
LDB1-204ENST00000490751 MUC7Q8TAX7 377 aa23.61■■□□□ 1.37
LDB1-204ENST00000490751 SCARB1Q8WTV0 552 aa23.61■■□□□ 1.37
LDB1-204ENST00000490751 RAB2BQ8WUD1 216 aa23.61■■□□□ 1.37
LDB1-204ENST00000490751 SPATA25Q9BR10 227 aa23.61■■□□□ 1.37
LDB1-204ENST00000490751 ZNF436Q9C0F3 470 aaPredicted RBP23.61■■□□□ 1.37
LDB1-204ENST00000490751 C21orf62Q9NYP8 219 aa23.61■■□□□ 1.37
LDB1-204ENST00000490751 RAB3DO95716 219 aa23.6■■□□□ 1.37
LDB1-204ENST00000490751 BTNL8Q6UX41 500 aa23.6■■□□□ 1.37
LDB1-204ENST00000490751 MARC2Q969Z3 335 aa23.6■■□□□ 1.37
LDB1-204ENST00000490751 BSCL2Q96G97 398 aaPredicted RBP23.6■■□□□ 1.37
LDB1-204ENST00000490751 TP53RKQ96S44 253 aa23.6■■□□□ 1.37
LDB1-204ENST00000490751 WFDC10AQ9H1F0 79 aa23.6■■□□□ 1.37
LDB1-204ENST00000490751 UFC1Q9Y3C8 167 aa23.6■■□□□ 1.37
LDB1-204ENST00000490751 NBEAL2Q6ZNJ1 2754 aa23.6■■□□□ 1.37
LDB1-204ENST00000490751 K7EIM0 57 aa23.59■■□□□ 1.37
LDB1-204ENST00000490751 SCGB2B2Q4G0G5 96 aa23.59■■□□□ 1.37
LDB1-204ENST00000490751 STEAP1BQ6NZ63 245 aa23.59■■□□□ 1.37
LDB1-204ENST00000490751 DEFB125Q8N687 156 aa23.59■■□□□ 1.37
LDB1-204ENST00000490751 OR1P1Q8NH06 330 aa23.59■■□□□ 1.37
LDB1-204ENST00000490751 DNAH7Q8WXX0 4024 aa23.58■■□□□ 1.37
LDB1-204ENST00000490751 ELLP55199 621 aaPredicted RBP23.58■■□□□ 1.37
LDB1-204ENST00000490751 MRPS10P82664 201 aaKnown RBP23.58■■□□□ 1.37
LDB1-204ENST00000490751 PRCDQ00LT1 54 aa23.58■■□□□ 1.37
LDB1-204ENST00000490751 OR2C3Q8N628 320 aa23.58■■□□□ 1.37
LDB1-204ENST00000490751 TERB2Q8NHR7 220 aa23.58■■□□□ 1.37
LDB1-204ENST00000490751 TMEM190Q8WZ59 177 aa23.58■■□□□ 1.37
LDB1-204ENST00000490751 CITED4Q96RK1 184 aa23.58■■□□□ 1.37
LDB1-204ENST00000490751 ATP6V0BQ99437 205 aa23.58■■□□□ 1.37
LDB1-204ENST00000490751 F8W735 103 aaPredicted RBP23.57■■□□□ 1.36
LDB1-204ENST00000490751 C8orf88P0DMB2 117 aa23.57■■□□□ 1.36
LDB1-204ENST00000490751 HSPE1P61604 102 aaKnown RBP23.57■■□□□ 1.36
LDB1-204ENST00000490751 SSBP1Q04837 148 aaKnown RBP23.57■■□□□ 1.36
LDB1-204ENST00000490751 IZUMO4Q1ZYL8 232 aa23.57■■□□□ 1.36
LDB1-204ENST00000490751 SPSB3Q6PJ21 355 aa23.57■■□□□ 1.36
LDB1-204ENST00000490751 LINC00322Q6ZN03 302 aaPredicted RBP23.57■■□□□ 1.36
LDB1-204ENST00000490751 UBAC2Q8NBM4 344 aa23.57■■□□□ 1.36
LDB1-204ENST00000490751 ZFAND1Q8TCF1 268 aa23.57■■□□□ 1.36
LDB1-204ENST00000490751 DYNC2LI1Q8TCX1 351 aa23.57■■□□□ 1.36
LDB1-204ENST00000490751 BCL7BQ9BQE9 202 aa23.57■■□□□ 1.36
LDB1-204ENST00000490751 CHRDL1Q9BU40 450 aa23.57■■□□□ 1.36
LDB1-204ENST00000490751 CCDC59Q9P031 241 aaKnown RBP23.57■■□□□ 1.36
LDB1-204ENST00000490751 MRPL27Q9P0M9 148 aaKnown RBP23.57■■□□□ 1.36
LDB1-204ENST00000490751 COPZ2Q9P299 210 aa23.57■■□□□ 1.36
LDB1-204ENST00000490751 CEPT1Q9Y6K0 416 aa23.57■■□□□ 1.36
LDB1-204ENST00000490751 C3orf85A0A1B0GTC6 90 aa23.56■■□□□ 1.36
LDB1-204ENST00000490751 OR11H12B2RN74 326 aa23.56■■□□□ 1.36
LDB1-204ENST00000490751 IGKV1-5P01602 117 aa23.56■■□□□ 1.36
LDB1-204ENST00000490751 TMBIM6P55061 237 aa23.56■■□□□ 1.36
LDB1-204ENST00000490751 Q56UQ5 140 aa23.56■■□□□ 1.36
LDB1-204ENST00000490751 CCDC71LQ8N9Z2 235 aa23.56■■□□□ 1.36
LDB1-204ENST00000490751 OR13C8Q8NGS7 320 aa23.56■■□□□ 1.36
LDB1-204ENST00000490751 SCAF4O95104 1147 aaKnown RBP23.55■■□□□ 1.36
LDB1-204ENST00000490751 AKR1C2P52895 323 aa23.55■■□□□ 1.36
LDB1-204ENST00000490751 FAAP20Q6NZ36 180 aa23.55■■□□□ 1.36
LDB1-204ENST00000490751 SLC16A13Q7RTY0 426 aa23.55■■□□□ 1.36
LDB1-204ENST00000490751 MARCH1Q8TCQ1 289 aa23.55■■□□□ 1.36
LDB1-204ENST00000490751 SMIM4Q8WVI0 70 aa23.55■■□□□ 1.36
LDB1-204ENST00000490751 MISP3Q96FF7 219 aa23.55■■□□□ 1.36
LDB1-204ENST00000490751 SRD5A3Q9H8P0 318 aa23.55■■□□□ 1.36
LDB1-204ENST00000490751 IL18Q14116 193 aa23.54■■□□□ 1.36
LDB1-204ENST00000490751 ZNF114Q8NC26 417 aa23.54■■□□□ 1.36
LDB1-204ENST00000490751 DIRAS2Q96HU8 199 aa23.54■■□□□ 1.36
LDB1-204ENST00000490751 NDUFA4O00483 81 aa23.53■■□□□ 1.36
LDB1-204ENST00000490751 ADMP35318 185 aa23.53■■□□□ 1.36
LDB1-204ENST00000490751 MEF2DQ14814 521 aa23.53■■□□□ 1.36
LDB1-204ENST00000490751 TRIM16LQ309B1 348 aa23.53■■□□□ 1.36
LDB1-204ENST00000490751 SP6Q3SY56 376 aa23.53■■□□□ 1.36
LDB1-204ENST00000490751 SPINK9Q5DT21 86 aa23.53■■□□□ 1.36
LDB1-204ENST00000490751 OR52B4Q8NGK2 314 aa23.53■■□□□ 1.36
LDB1-204ENST00000490751 TRAV25A0A0B4J276 109 aa23.52■■□□□ 1.36
LDB1-204ENST00000490751 RBMY1BA6NDE4 496 aaKnown RBP23.52■■□□□ 1.36
LDB1-204ENST00000490751 RBMY1EA6NEQ0 496 aaKnown RBP23.52■■□□□ 1.36
LDB1-204ENST00000490751 ATG12O94817 140 aa23.52■■□□□ 1.36
LDB1-204ENST00000490751 CTSDP07339 412 aaPredicted RBP23.52■■□□□ 1.36
LDB1-204ENST00000490751 RBMY1DP0C7P1 496 aaKnown RBP23.52■■□□□ 1.36
LDB1-204ENST00000490751 P0C879 139 aa23.52■■□□□ 1.36
LDB1-204ENST00000490751 RBPMS2Q6ZRY4 209 aaKnown RBP23.52■■□□□ 1.36
LDB1-204ENST00000490751 DAZ1Q9NQZ3 744 aaKnown RBP23.52■■□□□ 1.36
LDB1-204ENST00000490751 I3L2K1 104 aa23.51■■□□□ 1.35
LDB1-204ENST00000490751 CTDSPLO15194 276 aa23.51■■□□□ 1.35
LDB1-204ENST00000490751 RPL5P46777 297 aaKnown RBP23.51■■□□□ 1.35
LDB1-204ENST00000490751 ERHP84090 104 aaKnown RBP23.51■■□□□ 1.35
LDB1-204ENST00000490751 CASC10Q5T4H9 136 aa23.51■■□□□ 1.35
LDB1-204ENST00000490751 C20orf24Q9BUV8 137 aa23.51■■□□□ 1.35
LDB1-204ENST00000490751 C6orf62Q9GZU0 229 aaPredicted RBP23.51■■□□□ 1.35
LDB1-204ENST00000490751 EDA2RQ9HAV5 297 aa23.51■■□□□ 1.35
LDB1-204ENST00000490751 RETNQ9HD89 108 aa23.51■■□□□ 1.35
LDB1-204ENST00000490751 NOL3O60936 208 aaKnown RBP23.5■■□□□ 1.35
LDB1-204ENST00000490751 UCP1P25874 307 aa23.5■■□□□ 1.35
LDB1-204ENST00000490751 ANKRD55Q3KP44 614 aa23.5■■□□□ 1.35
LDB1-204ENST00000490751 GAR1Q9NY12 217 aaKnown RBP23.5■■□□□ 1.35
LDB1-204ENST00000490751 RABL2AQ9UBK7 228 aaPredicted RBP23.5■■□□□ 1.35
LDB1-204ENST00000490751 RABL2BQ9UNT1 228 aa23.5■■□□□ 1.35
LDB1-204ENST00000490751 IGHV3OR16-8A0A075B7F1 116 aa23.49■■□□□ 1.35
LDB1-204ENST00000490751 A0A0B4J293 547 aa23.49■■□□□ 1.35
LDB1-204ENST00000490751 DISC1C4P0D8 188 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms