RNA–Protein interactions for RNA: ENST00000490690.1

SHROOM3-209, Transcript of shroom family member 3, humanhuman

TSL 4

Gene SHROOM3, Length 504 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-209ENST00000490690 C2orf68Q2NKX9 166 aa15.51■□□□□ 0.07
SHROOM3-209ENST00000490690 IAH1Q2TAA2 248 aaPredicted RBP15.51■□□□□ 0.07
SHROOM3-209ENST00000490690 KLK9Q2XQG4 91 aa15.51■□□□□ 0.07
SHROOM3-209ENST00000490690 OR2C3Q8N628 320 aa15.51■□□□□ 0.07
SHROOM3-209ENST00000490690 NECAP1Q8NC96 275 aa15.51■□□□□ 0.07
SHROOM3-209ENST00000490690 OR1P1Q8NH06 330 aa15.51■□□□□ 0.07
SHROOM3-209ENST00000490690 HEYLQ9NQ87 328 aaPredicted RBP15.51■□□□□ 0.07
SHROOM3-209ENST00000490690 KLK9Q9UKQ9 250 aa15.51■□□□□ 0.07
SHROOM3-209ENST00000490690 F11RQ9Y624 299 aaKnown RBP15.51■□□□□ 0.07
SHROOM3-209ENST00000490690 PLXNB1O43157 2135 aa15.5■□□□□ 0.07
SHROOM3-209ENST00000490690 C13orf42A0A1B0GVH6 325 aa15.5■□□□□ 0.07
SHROOM3-209ENST00000490690 C5orf51A6NDU8 294 aa15.5■□□□□ 0.07
SHROOM3-209ENST00000490690 WRBO00258 174 aa15.5■□□□□ 0.07
SHROOM3-209ENST00000490690 SOX15O60248 233 aa15.5■□□□□ 0.07
SHROOM3-209ENST00000490690 APELAP0DMC3 54 aa15.5■□□□□ 0.07
SHROOM3-209ENST00000490690 MYOD1P15172 320 aa15.5■□□□□ 0.07
SHROOM3-209ENST00000490690 AREGP15514 252 aa15.5■□□□□ 0.07
SHROOM3-209ENST00000490690 HTR2BP41595 481 aa15.5■□□□□ 0.07
SHROOM3-209ENST00000490690 NKX2-1P43699 371 aaPredicted RBP15.5■□□□□ 0.07
SHROOM3-209ENST00000490690 RPL23AP62750 156 aaKnown RBP15.5■□□□□ 0.07
SHROOM3-209ENST00000490690 WT1-ASQ06250 92 aa15.5■□□□□ 0.07
SHROOM3-209ENST00000490690 OR10W1Q8NGF6 305 aa15.5■□□□□ 0.07
SHROOM3-209ENST00000490690 MYOZ3Q8TDC0 251 aa15.5■□□□□ 0.07
SHROOM3-209ENST00000490690 CITED2Q99967 270 aaPredicted RBP15.5■□□□□ 0.07
SHROOM3-209ENST00000490690 U3KQ87 197 aa15.5■□□□□ 0.07
SHROOM3-209ENST00000490690 A0A1B0GW64 132 aa15.49■□□□□ 0.07
SHROOM3-209ENST00000490690 FAM25EA8MYX2 175 aa15.49■□□□□ 0.07
SHROOM3-209ENST00000490690 SPNP16150 400 aa15.49■□□□□ 0.07
SHROOM3-209ENST00000490690 OR4F17Q8NGA8 305 aa15.49■□□□□ 0.07
SHROOM3-209ENST00000490690 DTD1Q8TEA8 209 aa15.49■□□□□ 0.07
SHROOM3-209ENST00000490690 CXorf58Q96LI9 332 aa15.49■□□□□ 0.07
SHROOM3-209ENST00000490690 OR4F4Q96R69 305 aa15.49■□□□□ 0.07
SHROOM3-209ENST00000490690 TRBV9A0A0B4J1U6 114 aa15.48■□□□□ 0.07
SHROOM3-209ENST00000490690 NUDT19A8MXV4 375 aa15.48■□□□□ 0.07
SHROOM3-209ENST00000490690 RPLP1P05386 114 aaKnown RBP15.48■□□□□ 0.07
SHROOM3-209ENST00000490690 C10orf99Q6UWK7 81 aa15.48■□□□□ 0.07
SHROOM3-209ENST00000490690 ZNF491Q8N8L2 437 aa15.48■□□□□ 0.07
SHROOM3-209ENST00000490690 C11orf44Q8N8P7 122 aa15.48■□□□□ 0.07
SHROOM3-209ENST00000490690 ZBTB8BQ8NAP8 495 aaPredicted RBP15.48■□□□□ 0.07
SHROOM3-209ENST00000490690 C4orf3Q8WVX3 66 aa15.48■□□□□ 0.07
SHROOM3-209ENST00000490690 C2orf50Q96LR7 162 aa15.48■□□□□ 0.07
SHROOM3-209ENST00000490690 SYNGR2O43760 224 aa15.47■□□□□ 0.07
SHROOM3-209ENST00000490690 RHOGP84095 191 aa15.47■□□□□ 0.07
SHROOM3-209ENST00000490690 RUNX1Q01196 453 aa15.47■□□□□ 0.07
SHROOM3-209ENST00000490690 ID3Q02535 119 aa15.47■□□□□ 0.07
SHROOM3-209ENST00000490690 ATP5G2Q06055 141 aa15.47■□□□□ 0.07
SHROOM3-209ENST00000490690 EXOSC2Q13868 293 aaKnown RBP15.47■□□□□ 0.07
SHROOM3-209ENST00000490690 TCTEX1D4Q5JR98 221 aa15.47■□□□□ 0.07
SHROOM3-209ENST00000490690 OR4D5Q8NGN0 318 aa15.47■□□□□ 0.07
SHROOM3-209ENST00000490690 MS4A10Q96PG2 267 aa15.47■□□□□ 0.07
SHROOM3-209ENST00000490690 ATP6V0BQ99437 205 aa15.47■□□□□ 0.07
SHROOM3-209ENST00000490690 GAR1Q9NY12 217 aaKnown RBP15.47■□□□□ 0.07
SHROOM3-209ENST00000490690 GSKIPQ9P0R6 139 aa15.47■□□□□ 0.07
SHROOM3-209ENST00000490690 IGLV11-55A0A075B6I3 123 aa15.46■□□□□ 0.07
SHROOM3-209ENST00000490690 REG1AP05451 166 aa15.46■□□□□ 0.07
SHROOM3-209ENST00000490690 KRTAP10-3P60369 221 aa15.46■□□□□ 0.07
SHROOM3-209ENST00000490690 SLC25A24Q6NUK1 477 aa15.46■□□□□ 0.07
SHROOM3-209ENST00000490690 SLC24A4Q8NFF2 622 aa15.46■□□□□ 0.07
SHROOM3-209ENST00000490690 ASB13Q8WXK3 278 aa15.46■□□□□ 0.07
SHROOM3-209ENST00000490690 KLK15Q9H2R5 256 aa15.46■□□□□ 0.07
SHROOM3-209ENST00000490690 RBKSQ9H477 322 aa15.46■□□□□ 0.07
SHROOM3-209ENST00000490690 ALG5Q9Y673 324 aa15.46■□□□□ 0.07
SHROOM3-209ENST00000490690 GOSR2O14653 212 aa15.45■□□□□ 0.06
SHROOM3-209ENST00000490690 SCAF4O95104 1147 aaKnown RBP15.45■□□□□ 0.06
SHROOM3-209ENST00000490690 PVALBP20472 110 aaPredicted RBP15.45■□□□□ 0.06
SHROOM3-209ENST00000490690 C2orf83Q53S99 150 aa15.45■□□□□ 0.06
SHROOM3-209ENST00000490690 KLHL30-AS1Q8NEE0 82 aa15.45■□□□□ 0.06
SHROOM3-209ENST00000490690 VN1R17PQ8TDU5 208 aa15.45■□□□□ 0.06
SHROOM3-209ENST00000490690 EEF1AKMT3Q96AZ1 226 aa15.45■□□□□ 0.06
SHROOM3-209ENST00000490690 OR10C1Q96KK4 312 aa15.45■□□□□ 0.06
SHROOM3-209ENST00000490690 RAB40CQ96S21 281 aa15.45■□□□□ 0.06
SHROOM3-209ENST00000490690 P2RX4Q99571 388 aa15.45■□□□□ 0.06
SHROOM3-209ENST00000490690 MED28Q9H204 178 aa15.45■□□□□ 0.06
SHROOM3-209ENST00000490690 FBXL7Q9UJT9 491 aa15.45■□□□□ 0.06
SHROOM3-209ENST00000490690 TRBV7-1A0A0A6YYK4 115 aa15.44■□□□□ 0.06
SHROOM3-209ENST00000490690 RPS10-NUDT3A0A1W2PQS6 291 aa15.44■□□□□ 0.06
SHROOM3-209ENST00000490690 SCGB2A1O75556 95 aa15.44■□□□□ 0.06
SHROOM3-209ENST00000490690 OR2J3O76001 311 aa15.44■□□□□ 0.06
SHROOM3-209ENST00000490690 IFNA10P01566 189 aa15.44■□□□□ 0.06
SHROOM3-209ENST00000490690 LGALS1P09382 135 aaKnown RBP15.44■□□□□ 0.06
SHROOM3-209ENST00000490690 NPY1RP25929 384 aa15.44■□□□□ 0.06
SHROOM3-209ENST00000490690 RAB11AP62491 216 aa15.44■□□□□ 0.06
SHROOM3-209ENST00000490690 C15orf32Q32M92 178 aa15.44■□□□□ 0.06
SHROOM3-209ENST00000490690 BSXQ3C1V8 233 aa15.44■□□□□ 0.06
SHROOM3-209ENST00000490690 SPINK9Q5DT21 86 aa15.44■□□□□ 0.06
SHROOM3-209ENST00000490690 RNASEH2CQ8TDP1 164 aaKnown RBP15.44■□□□□ 0.06
SHROOM3-209ENST00000490690 FANCD2OSQ96PS1 177 aa15.44■□□□□ 0.06
SHROOM3-209ENST00000490690 NMES1Q9C002 83 aa15.44■□□□□ 0.06
SHROOM3-209ENST00000490690 MPTX1A8MV57 137 aa15.43■□□□□ 0.06
SHROOM3-209ENST00000490690 CCSO14618 274 aa15.43■□□□□ 0.06
SHROOM3-209ENST00000490690 SCGB1D2O95969 90 aa15.43■□□□□ 0.06
SHROOM3-209ENST00000490690 PET100P0DJ07 73 aa15.43■□□□□ 0.06
SHROOM3-209ENST00000490690 TAS2R30P59541 319 aa15.43■□□□□ 0.06
SHROOM3-209ENST00000490690 NSUN5P1Q3KNT7 163 aa15.43■□□□□ 0.06
SHROOM3-209ENST00000490690 ETFRF1Q6IPR1 90 aa15.43■□□□□ 0.06
SHROOM3-209ENST00000490690 NXPH3O95157 252 aa15.42■□□□□ 0.06
SHROOM3-209ENST00000490690 RLN2P04090 185 aa15.42■□□□□ 0.06
SHROOM3-209ENST00000490690 RNASE2P10153 161 aaKnown RBP15.42■□□□□ 0.06
SHROOM3-209ENST00000490690 SRSF4Q08170 494 aaKnown RBP15.42■□□□□ 0.06
SHROOM3-209ENST00000490690 PVRIGQ6DKI7 326 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms