RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 CR1LQ2VPA4 569 aa12.82□□□□□ -0.36
BRD9-208ENST00000489816 PRR31Q5SQ13 230 aa12.82□□□□□ -0.36
BRD9-208ENST00000489816 FAM57AQ8TBR7 257 aa12.82□□□□□ -0.36
BRD9-208ENST00000489816 SAP30LQ9HAJ7 183 aa12.82□□□□□ -0.36
BRD9-208ENST00000489816 TRAV5A0A0B4J249 113 aa12.81□□□□□ -0.36
BRD9-208ENST00000489816 PRRG2O14669 202 aa12.81□□□□□ -0.36
BRD9-208ENST00000489816 CXorf1O96002 111 aa12.81□□□□□ -0.36
BRD9-208ENST00000489816 SSBP2P81877 361 aaPredicted RBP12.81□□□□□ -0.36
BRD9-208ENST00000489816 GFRALQ6UXV0 394 aa12.81□□□□□ -0.36
BRD9-208ENST00000489816 LSM4Q9Y4Z0 139 aaKnown RBP12.81□□□□□ -0.36
BRD9-208ENST00000489816 TEX50A0A1B0GTY4 177 aa12.81□□□□□ -0.36
BRD9-208ENST00000489816 NDUFS6O75380 124 aaKnown RBP12.81□□□□□ -0.36
BRD9-208ENST00000489816 CRYBB3P26998 211 aa12.81□□□□□ -0.36
BRD9-208ENST00000489816 TMEM256Q8N2U0 113 aa12.81□□□□□ -0.36
BRD9-208ENST00000489816 UHRF2Q96PU4 802 aa12.81□□□□□ -0.36
BRD9-208ENST00000489816 RPUSD1Q9UJJ7 312 aaKnown RBP12.81□□□□□ -0.36
BRD9-208ENST00000489816 MDFIC2A0A1B0GVS7 189 aa12.81□□□□□ -0.36
BRD9-208ENST00000489816 ENSAO43768 121 aaKnown RBP12.81□□□□□ -0.36
BRD9-208ENST00000489816 PDE6DO43924 150 aa12.81□□□□□ -0.36
BRD9-208ENST00000489816 CRYABP02511 175 aaKnown RBP12.81□□□□□ -0.36
BRD9-208ENST00000489816 MORN5Q5VZ52 161 aa12.81□□□□□ -0.36
BRD9-208ENST00000489816 IGFL3Q6UXB1 125 aa12.81□□□□□ -0.36
BRD9-208ENST00000489816 ZNF439Q8NDP4 499 aa12.81□□□□□ -0.36
BRD9-208ENST00000489816 IGFBPL1Q8WX77 278 aa12.81□□□□□ -0.36
BRD9-208ENST00000489816 SFRP2Q96HF1 295 aa12.81□□□□□ -0.36
BRD9-208ENST00000489816 NABP2Q9BQ15 211 aa12.81□□□□□ -0.36
BRD9-208ENST00000489816 TRAPPC1Q9Y5R8 145 aa12.81□□□□□ -0.36
BRD9-208ENST00000489816 NUPR1O60356 82 aa12.8□□□□□ -0.36
BRD9-208ENST00000489816 CBLN1P23435 193 aa12.8□□□□□ -0.36
BRD9-208ENST00000489816 TMEM200BQ69YZ2 307 aa12.8□□□□□ -0.36
BRD9-208ENST00000489816 FAM169BQ8N8A8 192 aa12.8□□□□□ -0.36
BRD9-208ENST00000489816 RITA1Q96K30 269 aa12.8□□□□□ -0.36
BRD9-208ENST00000489816 SFXN3Q9BWM7 321 aa12.8□□□□□ -0.36
BRD9-208ENST00000489816 CEACAM8P31997 349 aaPredicted RBP12.8□□□□□ -0.36
BRD9-208ENST00000489816 TCL1AP56279 114 aa12.8□□□□□ -0.36
BRD9-208ENST00000489816 FXYD3Q14802 87 aa12.8□□□□□ -0.36
BRD9-208ENST00000489816 RTL8BQ17RB0 113 aa12.8□□□□□ -0.36
BRD9-208ENST00000489816 TMEM183AQ8IXX5 376 aa12.8□□□□□ -0.36
BRD9-208ENST00000489816 OR10X1Q8NGY0 326 aa12.8□□□□□ -0.36
BRD9-208ENST00000489816 OR52E5Q8NH55 327 aa12.8□□□□□ -0.36
BRD9-208ENST00000489816 ANAPC16Q96DE5 110 aa12.8□□□□□ -0.36
BRD9-208ENST00000489816 SGK494Q96LW2 274 aa12.8□□□□□ -0.36
BRD9-208ENST00000489816 DIRC2Q96SL1 478 aa12.8□□□□□ -0.36
BRD9-208ENST00000489816 KCNIP2Q9NS61 270 aa12.8□□□□□ -0.36
BRD9-208ENST00000489816 hADV38S2A0JD32 116 aa12.79□□□□□ -0.36
BRD9-208ENST00000489816 RAB31Q13636 194 aa12.79□□□□□ -0.36
BRD9-208ENST00000489816 TPSG1Q9NRR2 321 aa12.79□□□□□ -0.36
BRD9-208ENST00000489816 DMRT1Q9Y5R6 373 aa12.79□□□□□ -0.36
BRD9-208ENST00000489816 ELOA3CA0A087WX78 387 aaPredicted RBP12.79□□□□□ -0.36
BRD9-208ENST00000489816 C17orf100A8MU93 164 aa12.79□□□□□ -0.36
BRD9-208ENST00000489816 K7EN84 100 aa12.79□□□□□ -0.36
BRD9-208ENST00000489816 MPDU1O75352 247 aa12.79□□□□□ -0.36
BRD9-208ENST00000489816 THBDP07204 575 aa12.79□□□□□ -0.36
BRD9-208ENST00000489816 HIST1H1BP16401 226 aaKnown RBP12.79□□□□□ -0.36
BRD9-208ENST00000489816 RHOBP62745 196 aa12.79□□□□□ -0.36
BRD9-208ENST00000489816 SUMO1P63165 101 aaKnown RBP12.79□□□□□ -0.36
BRD9-208ENST00000489816 PAX5Q02548 391 aa12.79□□□□□ -0.36
BRD9-208ENST00000489816 KCNIP4Q6PIL6 250 aa12.79□□□□□ -0.36
BRD9-208ENST00000489816 MRPL41Q8IXM3 137 aaKnown RBP12.79□□□□□ -0.36
BRD9-208ENST00000489816 LINC00479Q96M42 142 aa12.79□□□□□ -0.36
BRD9-208ENST00000489816 PYGO2Q9BRQ0 406 aa12.79□□□□□ -0.36
BRD9-208ENST00000489816 COMMD5Q9GZQ3 224 aa12.79□□□□□ -0.36
BRD9-208ENST00000489816 FOXA2Q9Y261 457 aaPredicted RBP12.79□□□□□ -0.36
BRD9-208ENST00000489816 MKRN2OSH3BPM6 223 aa12.79□□□□□ -0.36
BRD9-208ENST00000489816 UPK2O00526 184 aa12.79□□□□□ -0.36
BRD9-208ENST00000489816 GATA4P43694 442 aa12.79□□□□□ -0.36
BRD9-208ENST00000489816 SLC25A48Q6ZT89 311 aaKnown RBP12.79□□□□□ -0.36
BRD9-208ENST00000489816 C1orf174Q8IYL3 243 aa12.79□□□□□ -0.36
BRD9-208ENST00000489816 FAM222BQ8WU58 562 aa12.79□□□□□ -0.36
BRD9-208ENST00000489816 LINC00869P0C866 280 aa12.78□□□□□ -0.36
BRD9-208ENST00000489816 ZNF90Q03938 601 aa12.78□□□□□ -0.36
BRD9-208ENST00000489816 ZNF729A6NN14 1252 aaPredicted RBP12.78□□□□□ -0.36
BRD9-208ENST00000489816 FOXC1Q12948 553 aa12.78□□□□□ -0.36
BRD9-208ENST00000489816 KIR2DS2P43631 304 aa12.77□□□□□ -0.36
BRD9-208ENST00000489816 ERVFC1-1P60608 527 aa12.77□□□□□ -0.36
BRD9-208ENST00000489816 DEFA6Q01524 100 aa12.77□□□□□ -0.36
BRD9-208ENST00000489816 AARDQ4LEZ3 155 aa12.77□□□□□ -0.36
BRD9-208ENST00000489816 HCP5Q6MZN7 132 aa12.77□□□□□ -0.36
BRD9-208ENST00000489816 ZNF714Q96N38 554 aa12.77□□□□□ -0.36
BRD9-208ENST00000489816 RNASE7Q9H1E1 156 aaKnown RBP12.77□□□□□ -0.36
BRD9-208ENST00000489816 DYNLRB1Q9NP97 96 aa12.77□□□□□ -0.36
BRD9-208ENST00000489816 PQLC2Q6ZP29 291 aa12.77□□□□□ -0.37
BRD9-208ENST00000489816 OR10G8Q8NGN5 311 aa12.77□□□□□ -0.37
BRD9-208ENST00000489816 PPIAL4EA0A075B759 164 aa12.77□□□□□ -0.37
BRD9-208ENST00000489816 PPIAL4DF5H284 164 aa12.77□□□□□ -0.37
BRD9-208ENST00000489816 SLC25A17O43808 307 aa12.77□□□□□ -0.37
BRD9-208ENST00000489816 GGCTO75223 188 aaKnown RBP12.77□□□□□ -0.37
BRD9-208ENST00000489816 VENTXO95231 258 aa12.77□□□□□ -0.37
BRD9-208ENST00000489816 CA1P00915 261 aaPredicted RBP12.77□□□□□ -0.37
BRD9-208ENST00000489816 FAM87AP0C7U9 286 aa12.77□□□□□ -0.37
BRD9-208ENST00000489816 PPIAL4FP0DN26 164 aa12.77□□□□□ -0.37
BRD9-208ENST00000489816 GZMBP10144 247 aa12.77□□□□□ -0.37
BRD9-208ENST00000489816 TNFRSF1AP19438 455 aa12.77□□□□□ -0.37
BRD9-208ENST00000489816 TEX38Q6PEX7 206 aa12.77□□□□□ -0.37
BRD9-208ENST00000489816 PRSS33Q8NF86 280 aa12.77□□□□□ -0.37
BRD9-208ENST00000489816 RAB1CQ92928 201 aa12.77□□□□□ -0.37
BRD9-208ENST00000489816 PRNDQ9UKY0 176 aa12.77□□□□□ -0.37
BRD9-208ENST00000489816 PPIAL4AQ9Y536 164 aa12.77□□□□□ -0.37
BRD9-208ENST00000489816 TRGV8A0A0C4DH27 118 aa12.76□□□□□ -0.37
BRD9-208ENST00000489816 MGST1P10620 155 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms