RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 GPR146Q96CH1 333 aa8.29□□□□□ -1.08
SCAMP4-208ENST00000489554 OR10C1Q96KK4 312 aa8.29□□□□□ -1.08
SCAMP4-208ENST00000489554 RHOVQ96L33 236 aa8.29□□□□□ -1.08
SCAMP4-208ENST00000489554 NOL4LQ96MY1 436 aaPredicted RBP8.29□□□□□ -1.08
SCAMP4-208ENST00000489554 RNF126Q9BV68 326 aa8.29□□□□□ -1.08
SCAMP4-208ENST00000489554 ZNF471Q9BX82 626 aaPredicted RBP8.29□□□□□ -1.08
SCAMP4-208ENST00000489554 SLC25A31Q9H0C2 315 aa8.29□□□□□ -1.08
SCAMP4-208ENST00000489554 MED9Q9NWA0 146 aa8.29□□□□□ -1.08
SCAMP4-208ENST00000489554 PFDN2Q9UHV9 154 aa8.29□□□□□ -1.08
SCAMP4-208ENST00000489554 SHOXO15266 292 aa8.28□□□□□ -1.08
SCAMP4-208ENST00000489554 PLXNB1O43157 2135 aa8.28□□□□□ -1.08
SCAMP4-208ENST00000489554 PITX3O75364 302 aa8.28□□□□□ -1.08
SCAMP4-208ENST00000489554 JTBO76095 146 aa8.28□□□□□ -1.08
SCAMP4-208ENST00000489554 LY86O95711 162 aa8.28□□□□□ -1.08
SCAMP4-208ENST00000489554 LGALS7P47929 136 aa8.28□□□□□ -1.08
SCAMP4-208ENST00000489554 UBE2KP61086 200 aa8.28□□□□□ -1.08
SCAMP4-208ENST00000489554 RPS16P62249 146 aaKnown RBP8.28□□□□□ -1.08
SCAMP4-208ENST00000489554 RPL23AP62750 156 aaKnown RBP8.28□□□□□ -1.08
SCAMP4-208ENST00000489554 OXLD1Q5BKU9 147 aa8.28□□□□□ -1.08
SCAMP4-208ENST00000489554 TEX38Q6PEX7 206 aa8.28□□□□□ -1.08
SCAMP4-208ENST00000489554 SSX9Q7RTT3 188 aa8.28□□□□□ -1.08
SCAMP4-208ENST00000489554 SLC7A5P1Q8MH63 180 aa8.28□□□□□ -1.08
SCAMP4-208ENST00000489554 RNASE11Q8TAA1 199 aaKnown RBP8.28□□□□□ -1.08
SCAMP4-208ENST00000489554 ST8SIA2Q92186 375 aa8.28□□□□□ -1.08
SCAMP4-208ENST00000489554 RRNAD1Q96FB5 475 aaKnown RBP8.28□□□□□ -1.08
SCAMP4-208ENST00000489554 TMEM140Q9NV12 185 aa8.28□□□□□ -1.08
SCAMP4-208ENST00000489554 BET1LQ9NYM9 111 aa8.28□□□□□ -1.08
SCAMP4-208ENST00000489554 LINC00527Q9UJ94 153 aa8.28□□□□□ -1.08
SCAMP4-208ENST00000489554 BORCS7-ASMTA0A0B4J1R7 106 aa8.27□□□□□ -1.09
SCAMP4-208ENST00000489554 A0A1B0GW64 132 aa8.27□□□□□ -1.09
SCAMP4-208ENST00000489554 RNF222A6NCQ9 220 aa8.27□□□□□ -1.09
SCAMP4-208ENST00000489554 NUDT19A8MXV4 375 aa8.27□□□□□ -1.09
SCAMP4-208ENST00000489554 WRBO00258 174 aa8.27□□□□□ -1.09
SCAMP4-208ENST00000489554 UPK2O00526 184 aa8.27□□□□□ -1.09
SCAMP4-208ENST00000489554 FCN1O00602 326 aa8.27□□□□□ -1.09
SCAMP4-208ENST00000489554 RRHO14718 337 aa8.27□□□□□ -1.09
SCAMP4-208ENST00000489554 NBR2O15453 112 aa8.27□□□□□ -1.09
SCAMP4-208ENST00000489554 SLC25A17O43808 307 aa8.27□□□□□ -1.09
SCAMP4-208ENST00000489554 KBTBD11O94819 623 aa8.27□□□□□ -1.09
SCAMP4-208ENST00000489554 SCAF4O95104 1147 aaKnown RBP8.27□□□□□ -1.09
SCAMP4-208ENST00000489554 SPDEFO95238 335 aa8.27□□□□□ -1.09
SCAMP4-208ENST00000489554 HRASP01112 189 aa8.27□□□□□ -1.09
SCAMP4-208ENST00000489554 MYOD1P15172 320 aa8.27□□□□□ -1.09
SCAMP4-208ENST00000489554 RPL12P30050 165 aaKnown RBP8.27□□□□□ -1.09
SCAMP4-208ENST00000489554 NKX2-1P43699 371 aaPredicted RBP8.27□□□□□ -1.09
SCAMP4-208ENST00000489554 VAMP2P63027 116 aa8.27□□□□□ -1.09
SCAMP4-208ENST00000489554 PJVKQ0ZLH3 352 aa8.27□□□□□ -1.09
SCAMP4-208ENST00000489554 MMDQ15546 238 aa8.27□□□□□ -1.09
SCAMP4-208ENST00000489554 BAP18Q8IXM2 172 aa8.27□□□□□ -1.09
SCAMP4-208ENST00000489554 TEX45Q8NA69 505 aa8.27□□□□□ -1.09
SCAMP4-208ENST00000489554 TMEM167AQ8TBQ9 72 aa8.27□□□□□ -1.09
SCAMP4-208ENST00000489554 RCC1LQ96I51 464 aaKnown RBP8.27□□□□□ -1.09
SCAMP4-208ENST00000489554 FBXL15Q9H469 300 aa8.27□□□□□ -1.09
SCAMP4-208ENST00000489554 ZNF580Q9UK33 172 aa8.27□□□□□ -1.09
SCAMP4-208ENST00000489554 LSM5Q9Y4Y9 91 aaKnown RBP8.27□□□□□ -1.09
SCAMP4-208ENST00000489554 CGB1A6NKQ9 187 aa8.26□□□□□ -1.09
SCAMP4-208ENST00000489554 LINC01548A6NM66 108 aa8.26□□□□□ -1.09
SCAMP4-208ENST00000489554 FAM90A26D6RGX4 464 aa8.26□□□□□ -1.09
SCAMP4-208ENST00000489554 MED6O75586 246 aa8.26□□□□□ -1.09
SCAMP4-208ENST00000489554 SCGB1D2O95969 90 aa8.26□□□□□ -1.09
SCAMP4-208ENST00000489554 IGF1P05019 195 aa8.26□□□□□ -1.09
SCAMP4-208ENST00000489554 AKR1C2P52895 323 aa8.26□□□□□ -1.09
SCAMP4-208ENST00000489554 FOXE3Q13461 319 aa8.26□□□□□ -1.09
SCAMP4-208ENST00000489554 C5orf64Q2M2E5 130 aa8.26□□□□□ -1.09
SCAMP4-208ENST00000489554 CXorf66Q5JRM2 361 aaPredicted RBP8.26□□□□□ -1.09
SCAMP4-208ENST00000489554 DMBX1Q8NFW5 382 aa8.26□□□□□ -1.09
SCAMP4-208ENST00000489554 OR4D5Q8NGN0 318 aa8.26□□□□□ -1.09
SCAMP4-208ENST00000489554 OR1S1Q8NH92 325 aa8.26□□□□□ -1.09
SCAMP4-208ENST00000489554 TSNAXQ99598 290 aaKnown RBP8.26□□□□□ -1.09
SCAMP4-208ENST00000489554 GPR61Q9BZJ8 451 aa8.26□□□□□ -1.09
SCAMP4-208ENST00000489554 ZNF430Q9H8G1 570 aaPredicted RBP8.26□□□□□ -1.09
SCAMP4-208ENST00000489554 TMEM14BQ9NUH8 114 aa8.26□□□□□ -1.09
SCAMP4-208ENST00000489554 COA4Q9NYJ1 87 aa8.26□□□□□ -1.09
SCAMP4-208ENST00000489554 KIAA1456Q9P272 454 aa8.26□□□□□ -1.09
SCAMP4-208ENST00000489554 METTL1Q9UBP6 276 aaKnown RBP8.26□□□□□ -1.09
SCAMP4-208ENST00000489554 CACNG5Q9UF02 275 aa8.26□□□□□ -1.09
SCAMP4-208ENST00000489554 PRKDCP78527 4128 aaKnown RBP8.26□□□□□ -1.09
SCAMP4-208ENST00000489554 NOTCH3Q9UM47 2321 aa8.25□□□□□ -1.09
SCAMP4-208ENST00000489554 C15orf61A6NNL5 157 aa8.25□□□□□ -1.09
SCAMP4-208ENST00000489554 E7EUB6 86 aa8.25□□□□□ -1.09
SCAMP4-208ENST00000489554 H0YIZ8 118 aa8.25□□□□□ -1.09
SCAMP4-208ENST00000489554 IGHG4P01861 327 aa8.25□□□□□ -1.09
SCAMP4-208ENST00000489554 HLA-DRB1P01911 266 aa8.25□□□□□ -1.09
SCAMP4-208ENST00000489554 MBPP02686 304 aaPredicted RBP8.25□□□□□ -1.09
SCAMP4-208ENST00000489554 ELANEP08246 267 aa8.25□□□□□ -1.09
SCAMP4-208ENST00000489554 FGF2P09038 288 aa8.25□□□□□ -1.09
SCAMP4-208ENST00000489554 IGLL1P15814 213 aa8.25□□□□□ -1.09
SCAMP4-208ENST00000489554 OR2B8PP59922 312 aa8.25□□□□□ -1.09
SCAMP4-208ENST00000489554 NDPQ00604 133 aa8.25□□□□□ -1.09
SCAMP4-208ENST00000489554 BAXQ07812 192 aa8.25□□□□□ -1.09
SCAMP4-208ENST00000489554 PRSS8Q16651 343 aa8.25□□□□□ -1.09
SCAMP4-208ENST00000489554 VMA21Q3ZAQ7 101 aa8.25□□□□□ -1.09
SCAMP4-208ENST00000489554 C10orf55Q5SWW7 151 aa8.25□□□□□ -1.09
SCAMP4-208ENST00000489554 H2BFWTQ7Z2G1 175 aa8.25□□□□□ -1.09
SCAMP4-208ENST00000489554 PPP1R27Q86WC6 154 aa8.25□□□□□ -1.09
SCAMP4-208ENST00000489554 LINC00482Q8N8I6 264 aa8.25□□□□□ -1.09
SCAMP4-208ENST00000489554 RNF152Q8N8N0 203 aa8.25□□□□□ -1.09
SCAMP4-208ENST00000489554 KLHL30-AS1Q8NEE0 82 aa8.25□□□□□ -1.09
SCAMP4-208ENST00000489554 OR4A5Q8NH83 315 aa8.25□□□□□ -1.09
SCAMP4-208ENST00000489554 RNF141Q8WVD5 230 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms