RNA–Protein interactions for RNA: ENST00000489475.5

HOXB3-210, Transcript of homeobox B3, humanhuman

TSL 2 BASIC

Gene HOXB3, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-210ENST00000489475 SUB1P53999 127 aaKnown RBP eCLIP21.35■■□□□ 1.01
HOXB3-210ENST00000489475 SSBP2P81877 361 aaPredicted RBP21.35■■□□□ 1.01
HOXB3-210ENST00000489475 TUSC1Q2TAM9 212 aa21.35■■□□□ 1.01
HOXB3-210ENST00000489475 SLC7A5P1Q8MH63 180 aa21.35■■□□□ 1.01
HOXB3-210ENST00000489475 IGLC7A0M8Q6 106 aa21.34■■□□□ 1.01
HOXB3-210ENST00000489475 PRSS46E5RG02 174 aa21.34■■□□□ 1.01
HOXB3-210ENST00000489475 VWC2Q2TAL6 325 aa21.34■■□□□ 1.01
HOXB3-210ENST00000489475 WDR61Q9GZS3 305 aaKnown RBP21.34■■□□□ 1.01
HOXB3-210ENST00000489475 DLK1P80370 383 aa21.34■■□□□ 1.01
HOXB3-210ENST00000489475 RUNX1Q01196 453 aa21.34■■□□□ 1.01
HOXB3-210ENST00000489475 HSD17B13Q7Z5P4 300 aaPredicted RBP21.34■■□□□ 1.01
HOXB3-210ENST00000489475 SVEP1Q4LDE5 3571 aa21.34■■□□□ 1.01
HOXB3-210ENST00000489475 SULT1A2P50226 295 aa21.33■■□□□ 1.01
HOXB3-210ENST00000489475 FXYD3Q14802 87 aa21.33■■□□□ 1.01
HOXB3-210ENST00000489475 OR2G3Q8NGZ4 309 aa21.33■■□□□ 1.01
HOXB3-210ENST00000489475 ZANQ9Y493 2812 aa21.33■■□□□ 1
HOXB3-210ENST00000489475 TEX22C9J3V5 150 aa21.32■■□□□ 1
HOXB3-210ENST00000489475 FAM157CP0CG43 387 aa21.32■■□□□ 1
HOXB3-210ENST00000489475 ZNF562Q6V9R5 426 aa21.32■■□□□ 1
HOXB3-210ENST00000489475 Q8N9W7 124 aa21.32■■□□□ 1
HOXB3-210ENST00000489475 TAF15Q92804 592 aaKnown RBP eCLIP21.32■■□□□ 1
HOXB3-210ENST00000489475 SSX3Q99909 188 aa21.32■■□□□ 1
HOXB3-210ENST00000489475 SRSF8Q9BRL6 282 aaKnown RBP21.32■■□□□ 1
HOXB3-210ENST00000489475 SOX21Q9Y651 276 aaPredicted RBP21.32■■□□□ 1
HOXB3-210ENST00000489475 CELSR1Q9NYQ6 3014 aa21.32■■□□□ 1
HOXB3-210ENST00000489475 REG1AP05451 166 aa21.32■■□□□ 1
HOXB3-210ENST00000489475 CIARTQ8N365 385 aaPredicted RBP21.32■■□□□ 1
HOXB3-210ENST00000489475 NANPQ8TBE9 248 aa21.32■■□□□ 1
HOXB3-210ENST00000489475 SSMEM1Q8WWF3 244 aa21.32■■□□□ 1
HOXB3-210ENST00000489475 P2RX4Q99571 388 aa21.32■■□□□ 1
HOXB3-210ENST00000489475 ITPR3Q14573 2671 aa21.31■■□□□ 1
HOXB3-210ENST00000489475 SMCO3A2RU48 225 aa21.31■■□□□ 1
HOXB3-210ENST00000489475 FGF16O43320 207 aa21.31■■□□□ 1
HOXB3-210ENST00000489475 APELAP0DMC3 54 aa21.31■■□□□ 1
HOXB3-210ENST00000489475 AREGP15514 252 aa21.31■■□□□ 1
HOXB3-210ENST00000489475 RASL11BQ9BPW5 248 aa21.31■■□□□ 1
HOXB3-210ENST00000489475 ABCA1O95477 2261 aa21.31■■□□□ 1
HOXB3-210ENST00000489475 CSMD1Q96PZ7 3565 aa21.3■■□□□ 1
HOXB3-210ENST00000489475 ZNF705EA8MWA4 302 aaPredicted RBP21.3■■□□□ 1
HOXB3-210ENST00000489475 FGF7P21781 194 aa21.3■■□□□ 1
HOXB3-210ENST00000489475 PIFOQ8TCI5 191 aa21.3■■□□□ 1
HOXB3-210ENST00000489475 ABHD5Q8WTS1 349 aa21.3■■□□□ 1
HOXB3-210ENST00000489475 RSG1Q9BU20 258 aa21.3■■□□□ 1
HOXB3-210ENST00000489475 PLA2G2EQ9NZK7 142 aa21.3■■□□□ 1
HOXB3-210ENST00000489475 RFNGQ9Y644 331 aa21.3■■□□□ 1
HOXB3-210ENST00000489475 SMAD7O15105 426 aaKnown RBP21.29■■□□□ 1
HOXB3-210ENST00000489475 CX3CL1P78423 397 aa21.29■■□□□ 1
HOXB3-210ENST00000489475 TMEM182Q6ZP80 229 aaPredicted RBP21.29■■□□□ 1
HOXB3-210ENST00000489475 CSPG4Q6UVK1 2322 aa21.29■■□□□ 1
HOXB3-210ENST00000489475 NAV3Q8IVL0 2385 aa21.29■■□□□ 1
HOXB3-210ENST00000489475 LINC00862A6NCI5 91 aa21.29■■□□□ 1
HOXB3-210ENST00000489475 RAB5CP51148 216 aa21.29■■□□□ 1
HOXB3-210ENST00000489475 ZNF114Q8NC26 417 aa21.29■■□□□ 1
HOXB3-210ENST00000489475 RNASEH2CQ8TDP1 164 aaKnown RBP21.29■■□□□ 1
HOXB3-210ENST00000489475 HLA-DRB1P01911 266 aa21.28■■□□□ 1
HOXB3-210ENST00000489475 ARPC1AQ92747 370 aa21.28■■□□□ 1
HOXB3-210ENST00000489475 SAT2Q96F10 170 aaPredicted RBP21.28■■□□□ 1
HOXB3-210ENST00000489475 CXorf58Q96LI9 332 aa21.28■■□□□ 1
HOXB3-210ENST00000489475 RBM14Q96PK6 669 aaKnown RBP21.28■■□□□ 1
HOXB3-210ENST00000489475 SLC25A33Q9BSK2 321 aa21.28■■□□□ 1
HOXB3-210ENST00000489475 PSMG3Q9BT73 122 aaPredicted RBP21.28■■□□□ 1
HOXB3-210ENST00000489475 WDR83OSQ9Y284 106 aa21.28■■□□□ 1
HOXB3-210ENST00000489475 UMAD1C9J7I0 102 aa21.27■■□□□ 1
HOXB3-210ENST00000489475 FNDC10F2Z333 226 aa21.27■■□□□ 1
HOXB3-210ENST00000489475 ATP6V1G1O75348 118 aa21.27■■□□□ 1
HOXB3-210ENST00000489475 AANATQ16613 207 aa21.27■■□□□ 1
HOXB3-210ENST00000489475 ARSJQ5FYB0 599 aaPredicted RBP21.27■■□□□ 1
HOXB3-210ENST00000489475 BTNL8Q6UX41 500 aa21.27■■□□□ 1
HOXB3-210ENST00000489475 NPVFQ9HCQ7 196 aa21.27■■□□□ 1
HOXB3-210ENST00000489475 FSHBP01225 129 aa21.27■□□□□ 0.99
HOXB3-210ENST00000489475 PRH1P02810 166 aa21.27■□□□□ 0.99
HOXB3-210ENST00000489475 MDKP21741 143 aaPredicted RBP21.27■□□□□ 0.99
HOXB3-210ENST00000489475 TMEM219Q86XT9 240 aa21.27■□□□□ 0.99
HOXB3-210ENST00000489475 ZNF709Q8N972 641 aa21.27■□□□□ 0.99
HOXB3-210ENST00000489475 FBXO7Q9Y3I1 522 aa21.27■□□□□ 0.99
HOXB3-210ENST00000489475 H3BUX3 64 aa21.26■□□□□ 0.99
HOXB3-210ENST00000489475 TREML4Q6UXN2 200 aa21.26■□□□□ 0.99
HOXB3-210ENST00000489475 OR1P1Q8NH06 330 aa21.26■□□□□ 0.99
HOXB3-210ENST00000489475 FAM103A1Q9BTL3 118 aaKnown RBP21.26■□□□□ 0.99
HOXB3-210ENST00000489475 MOB4Q9Y3A3 225 aa21.26■□□□□ 0.99
HOXB3-210ENST00000489475 TIMM9Q9Y5J7 89 aa21.26■□□□□ 0.99
HOXB3-210ENST00000489475 TRIM77I1YAP6 450 aa21.25■□□□□ 0.99
HOXB3-210ENST00000489475 MPDU1O75352 247 aa21.25■□□□□ 0.99
HOXB3-210ENST00000489475 AKR1C1Q04828 323 aa21.25■□□□□ 0.99
HOXB3-210ENST00000489475 AKR1C8PQ5T2L2 129 aa21.25■□□□□ 0.99
HOXB3-210ENST00000489475 CACNG8Q8WXS5 425 aa21.25■□□□□ 0.99
HOXB3-210ENST00000489475 NPCDR1Q9BY65 106 aa21.25■□□□□ 0.99
HOXB3-210ENST00000489475 GPX4P36969 197 aaPredicted RBP21.25■□□□□ 0.99
HOXB3-210ENST00000489475 BLOC1S1P78537 153 aa21.25■□□□□ 0.99
HOXB3-210ENST00000489475 SERF2P84101 59 aa21.25■□□□□ 0.99
HOXB3-210ENST00000489475 CD69Q07108 199 aa21.25■□□□□ 0.99
HOXB3-210ENST00000489475 F11RQ9Y624 299 aaKnown RBP21.25■□□□□ 0.99
HOXB3-210ENST00000489475 IGHV7-81A0A0B4J1V7 117 aa21.24■□□□□ 0.99
HOXB3-210ENST00000489475 CENPVQ7Z7K6 275 aaPredicted RBP21.24■□□□□ 0.99
HOXB3-210ENST00000489475 BCL6BQ8N143 479 aaPredicted RBP21.24■□□□□ 0.99
HOXB3-210ENST00000489475 C5orf56Q8N8D9 126 aa21.24■□□□□ 0.99
HOXB3-210ENST00000489475 PFDN2Q9UHV9 154 aa21.24■□□□□ 0.99
HOXB3-210ENST00000489475 PITPNC1Q9UKF7 332 aa21.24■□□□□ 0.99
HOXB3-210ENST00000489475 C17orf112F2Z3M2 114 aa21.23■□□□□ 0.99
HOXB3-210ENST00000489475 OPRK1P41145 380 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms