RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 GABARAPO95166 117 aa8.94□□□□□ -0.98
CCHCR1-215ENST00000488920 PGAM2P15259 253 aa8.94□□□□□ -0.98
CCHCR1-215ENST00000488920 ZNF182P17025 639 aaPredicted RBP8.94□□□□□ -0.98
CCHCR1-215ENST00000488920 PI3P19957 117 aa8.94□□□□□ -0.98
CCHCR1-215ENST00000488920 RBPMS2Q6ZRY4 209 aaKnown RBP8.94□□□□□ -0.98
CCHCR1-215ENST00000488920 H2BFWTQ7Z2G1 175 aa8.94□□□□□ -0.98
CCHCR1-215ENST00000488920 UBAC2Q8NBM4 344 aa8.94□□□□□ -0.98
CCHCR1-215ENST00000488920 OR52I2Q8NH67 350 aa8.94□□□□□ -0.98
CCHCR1-215ENST00000488920 OR4A16Q8NH70 328 aa8.94□□□□□ -0.98
CCHCR1-215ENST00000488920 AP3S1Q92572 193 aa8.94□□□□□ -0.98
CCHCR1-215ENST00000488920 MARC2Q969Z3 335 aa8.94□□□□□ -0.98
CCHCR1-215ENST00000488920 MRGPRFQ96AM1 343 aa8.94□□□□□ -0.98
CCHCR1-215ENST00000488920 BSCL2Q96G97 398 aaPredicted RBP8.94□□□□□ -0.98
CCHCR1-215ENST00000488920 SEC22AQ96IW7 307 aa8.94□□□□□ -0.98
CCHCR1-215ENST00000488920 TSC22D3Q99576 134 aa8.94□□□□□ -0.98
CCHCR1-215ENST00000488920 CHRDL1Q9BU40 450 aa8.94□□□□□ -0.98
CCHCR1-215ENST00000488920 FAM212BQ9NTI7 297 aaPredicted RBP8.94□□□□□ -0.98
CCHCR1-215ENST00000488920 EXTL2Q9UBQ6 330 aa8.94□□□□□ -0.98
CCHCR1-215ENST00000488920 TENM2Q9NT68 2774 aa8.94□□□□□ -0.98
CCHCR1-215ENST00000488920 C15orf61A6NNL5 157 aa8.93□□□□□ -0.98
CCHCR1-215ENST00000488920 F8W735 103 aaPredicted RBP8.93□□□□□ -0.98
CCHCR1-215ENST00000488920 ZNF207O43670 478 aaKnown RBP8.93□□□□□ -0.98
CCHCR1-215ENST00000488920 CD3DP04234 171 aa8.93□□□□□ -0.98
CCHCR1-215ENST00000488920 ADMP35318 185 aa8.93□□□□□ -0.98
CCHCR1-215ENST00000488920 ELLP55199 621 aaPredicted RBP8.93□□□□□ -0.98
CCHCR1-215ENST00000488920 IZUMO4Q1ZYL8 232 aa8.93□□□□□ -0.98
CCHCR1-215ENST00000488920 ANKRD55Q3KP44 614 aa8.93□□□□□ -0.98
CCHCR1-215ENST00000488920 Q56UQ5 140 aa8.93□□□□□ -0.98
CCHCR1-215ENST00000488920 RNASE10Q5GAN6 216 aaKnown RBP8.93□□□□□ -0.98
CCHCR1-215ENST00000488920 SPSB3Q6PJ21 355 aa8.93□□□□□ -0.98
CCHCR1-215ENST00000488920 TMEM190Q8WZ59 177 aa8.93□□□□□ -0.98
CCHCR1-215ENST00000488920 MISP3Q96FF7 219 aa8.93□□□□□ -0.98
CCHCR1-215ENST00000488920 ABHD1Q96SE0 405 aa8.93□□□□□ -0.98
CCHCR1-215ENST00000488920 C20orf24Q9BUV8 137 aa8.93□□□□□ -0.98
CCHCR1-215ENST00000488920 TRAV25A0A0B4J276 109 aa8.92□□□□□ -0.98
CCHCR1-215ENST00000488920 IGHV3-48P01763 117 aa8.92□□□□□ -0.98
CCHCR1-215ENST00000488920 OR2C3Q8N628 320 aa8.92□□□□□ -0.98
CCHCR1-215ENST00000488920 OR1L6Q8NGR2 347 aa8.92□□□□□ -0.98
CCHCR1-215ENST00000488920 OR1P1Q8NH06 330 aa8.92□□□□□ -0.98
CCHCR1-215ENST00000488920 C5orf66Q9H5L9 145 aa8.92□□□□□ -0.98
CCHCR1-215ENST00000488920 DAZ1Q9NQZ3 744 aaKnown RBP8.92□□□□□ -0.98
CCHCR1-215ENST00000488920 MTFP1Q9UDX5 166 aa8.92□□□□□ -0.98
CCHCR1-215ENST00000488920 I3L2K1 104 aa8.91□□□□□ -0.98
CCHCR1-215ENST00000488920 NDUFA4O00483 81 aa8.91□□□□□ -0.98
CCHCR1-215ENST00000488920 CTSGP08311 255 aa8.91□□□□□ -0.98
CCHCR1-215ENST00000488920 PIGPP57054 158 aa8.91□□□□□ -0.98
CCHCR1-215ENST00000488920 RND3P61587 244 aa8.91□□□□□ -0.98
CCHCR1-215ENST00000488920 HSPE1P61604 102 aaKnown RBP8.91□□□□□ -0.98
CCHCR1-215ENST00000488920 PRCDQ00LT1 54 aa8.91□□□□□ -0.98
CCHCR1-215ENST00000488920 SP6Q3SY56 376 aa8.91□□□□□ -0.98
CCHCR1-215ENST00000488920 SPINK9Q5DT21 86 aa8.91□□□□□ -0.98
CCHCR1-215ENST00000488920 LHFPL1Q86WI0 220 aa8.91□□□□□ -0.98
CCHCR1-215ENST00000488920 OR4D10Q8NGI6 311 aa8.91□□□□□ -0.98
CCHCR1-215ENST00000488920 TP53RKQ96S44 253 aa8.91□□□□□ -0.98
CCHCR1-215ENST00000488920 ATP6V0BQ99437 205 aa8.91□□□□□ -0.98
CCHCR1-215ENST00000488920 GGTLC1Q9BX51 225 aa8.91□□□□□ -0.98
CCHCR1-215ENST00000488920 RYR2Q92736 4967 aa8.91□□□□□ -0.98
CCHCR1-215ENST00000488920 LOC102724200A0A096LPH7 203 aaPredicted RBP8.9□□□□□ -0.98
CCHCR1-215ENST00000488920 A0A0B4J293 547 aa8.9□□□□□ -0.98
CCHCR1-215ENST00000488920 K7EMT4 169 aa8.9□□□□□ -0.98
CCHCR1-215ENST00000488920 CTDSP2O14595 271 aa8.9□□□□□ -0.98
CCHCR1-215ENST00000488920 NUPL2O15504 423 aaKnown RBP8.9□□□□□ -0.98
CCHCR1-215ENST00000488920 RGS5O15539 181 aa8.9□□□□□ -0.98
CCHCR1-215ENST00000488920 YIF1AO95070 293 aa8.9□□□□□ -0.98
CCHCR1-215ENST00000488920 MT-CO2P00403 227 aa8.9□□□□□ -0.98
CCHCR1-215ENST00000488920 IGKV1-5P01602 117 aa8.9□□□□□ -0.98
CCHCR1-215ENST00000488920 PPP5CP53041 499 aa8.9□□□□□ -0.98
CCHCR1-215ENST00000488920 MFAP4P55083 255 aa8.9□□□□□ -0.98
CCHCR1-215ENST00000488920 ERHP84090 104 aaKnown RBP8.9□□□□□ -0.98
CCHCR1-215ENST00000488920 SPCS2Q15005 226 aa8.9□□□□□ -0.98
CCHCR1-215ENST00000488920 SCGB2B2Q4G0G5 96 aa8.9□□□□□ -0.98
CCHCR1-215ENST00000488920 LAMTOR1Q6IAA8 161 aa8.9□□□□□ -0.98
CCHCR1-215ENST00000488920 GPR141Q7Z602 305 aa8.9□□□□□ -0.98
CCHCR1-215ENST00000488920 ARRDC1Q8N5I2 433 aa8.9□□□□□ -0.98
CCHCR1-215ENST00000488920 TMEM229BQ8NBD8 167 aa8.9□□□□□ -0.98
CCHCR1-215ENST00000488920 TERB2Q8NHR7 220 aa8.9□□□□□ -0.98
CCHCR1-215ENST00000488920 PINX1Q96BK5 328 aaKnown RBP8.9□□□□□ -0.98
CCHCR1-215ENST00000488920 ZNF486Q96H40 463 aaPredicted RBP8.9□□□□□ -0.98
CCHCR1-215ENST00000488920 SPAG8Q99932 426 aaPredicted RBP8.9□□□□□ -0.98
CCHCR1-215ENST00000488920 MRPS26Q9BYN8 205 aaKnown RBP8.9□□□□□ -0.98
CCHCR1-215ENST00000488920 MIXL1Q9H2W2 232 aa8.9□□□□□ -0.98
CCHCR1-215ENST00000488920 UBQLN2Q9UHD9 624 aa8.9□□□□□ -0.98
CCHCR1-215ENST00000488920 DYNC2H1Q8NCM8 4307 aaKnown RBP8.9□□□□□ -0.98
CCHCR1-215ENST00000488920 IGHV3-49A0A0A0MS15 119 aa8.89□□□□□ -0.99
CCHCR1-215ENST00000488920 LCE6AA0A183 80 aa8.89□□□□□ -0.99
CCHCR1-215ENST00000488920 C3orf85A0A1B0GTC6 90 aa8.89□□□□□ -0.99
CCHCR1-215ENST00000488920 C15orf62A8K5M9 175 aa8.89□□□□□ -0.99
CCHCR1-215ENST00000488920 TSPAN4O14817 238 aa8.89□□□□□ -0.99
CCHCR1-215ENST00000488920 RAB3DO95716 219 aa8.89□□□□□ -0.99
CCHCR1-215ENST00000488920 TBPP20226 339 aa8.89□□□□□ -0.99
CCHCR1-215ENST00000488920 ALDH3B2P48448 385 aa8.89□□□□□ -0.99
CCHCR1-215ENST00000488920 RELQ04864 619 aaPredicted RBP8.89□□□□□ -0.99
CCHCR1-215ENST00000488920 STEAP1BQ6NZ63 245 aa8.89□□□□□ -0.99
CCHCR1-215ENST00000488920 OR13C8Q8NGS7 320 aa8.89□□□□□ -0.99
CCHCR1-215ENST00000488920 ZFAND1Q8TCF1 268 aa8.89□□□□□ -0.99
CCHCR1-215ENST00000488920 C15orf40Q8WUR7 153 aa8.89□□□□□ -0.99
CCHCR1-215ENST00000488920 ZNF414Q96IQ9 312 aa8.89□□□□□ -0.99
CCHCR1-215ENST00000488920 COPZ2Q9P299 210 aa8.89□□□□□ -0.99
CCHCR1-215ENST00000488920 SMPXQ9UHP9 88 aa8.89□□□□□ -0.99
CCHCR1-215ENST00000488920 STARD9Q9P2P6 4700 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms