RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 ZNF846Q147U1 533 aa14.35□□□□□ -0.11
PTCD3-217ENST00000488801 C15orf32Q32M92 178 aa14.35□□□□□ -0.11
PTCD3-217ENST00000488801 OR2C3Q8N628 320 aa14.35□□□□□ -0.11
PTCD3-217ENST00000488801 GPR146Q96CH1 333 aa14.35□□□□□ -0.11
PTCD3-217ENST00000488801 RRNAD1Q96FB5 475 aaKnown RBP14.35□□□□□ -0.11
PTCD3-217ENST00000488801 F11RQ9Y624 299 aaKnown RBP14.35□□□□□ -0.11
PTCD3-217ENST00000488801 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.34□□□□□ -0.11
PTCD3-217ENST00000488801 DUXBA0A1W2PPF3 345 aa14.34□□□□□ -0.11
PTCD3-217ENST00000488801 NDUFB8O95169 186 aa14.34□□□□□ -0.11
PTCD3-217ENST00000488801 SFT2D2O95562 160 aa14.34□□□□□ -0.11
PTCD3-217ENST00000488801 TRBV12-3P01733 135 aa14.34□□□□□ -0.11
PTCD3-217ENST00000488801 ANXA3P12429 323 aa14.34□□□□□ -0.11
PTCD3-217ENST00000488801 IGLL1P15814 213 aa14.34□□□□□ -0.11
PTCD3-217ENST00000488801 ANKRD55Q3KP44 614 aa14.34□□□□□ -0.11
PTCD3-217ENST00000488801 OXLD1Q5BKU9 147 aa14.34□□□□□ -0.11
PTCD3-217ENST00000488801 LGI3Q8N145 548 aa14.34□□□□□ -0.11
PTCD3-217ENST00000488801 CCDC140Q96MF4 163 aa14.34□□□□□ -0.11
PTCD3-217ENST00000488801 FLVCR2Q9UPI3 526 aa14.34□□□□□ -0.11
PTCD3-217ENST00000488801 PRKDCP78527 4128 aaKnown RBP14.34□□□□□ -0.11
PTCD3-217ENST00000488801 UPK1BO75841 260 aa14.33□□□□□ -0.12
PTCD3-217ENST00000488801 SLURP1P55000 103 aa14.33□□□□□ -0.12
PTCD3-217ENST00000488801 ASAH1Q13510 395 aa14.33□□□□□ -0.12
PTCD3-217ENST00000488801 OR52E5Q8NH55 327 aa14.33□□□□□ -0.12
PTCD3-217ENST00000488801 RANGRFQ9HD47 186 aaPredicted RBP14.33□□□□□ -0.12
PTCD3-217ENST00000488801 CACNG5Q9UF02 275 aa14.33□□□□□ -0.12
PTCD3-217ENST00000488801 FBXL7Q9UJT9 491 aa14.33□□□□□ -0.12
PTCD3-217ENST00000488801 HOXD3P31249 432 aaPredicted RBP14.32□□□□□ -0.12
PTCD3-217ENST00000488801 IFITM3Q01628 133 aa14.32□□□□□ -0.12
PTCD3-217ENST00000488801 ATP5G2Q06055 141 aa14.32□□□□□ -0.12
PTCD3-217ENST00000488801 FAM209BQ5JX69 171 aa14.32□□□□□ -0.12
PTCD3-217ENST00000488801 PVRIGQ6DKI7 326 aa14.32□□□□□ -0.12
PTCD3-217ENST00000488801 LYZL2Q7Z4W2 148 aa14.32□□□□□ -0.12
PTCD3-217ENST00000488801 OR1P1Q8NH06 330 aa14.32□□□□□ -0.12
PTCD3-217ENST00000488801 RNASE11Q8TAA1 199 aaKnown RBP14.32□□□□□ -0.12
PTCD3-217ENST00000488801 MCRIP2Q9BUT9 160 aaKnown RBP14.32□□□□□ -0.12
PTCD3-217ENST00000488801 HINT2Q9BX68 163 aa14.32□□□□□ -0.12
PTCD3-217ENST00000488801 PEF1Q9UBV8 284 aaKnown RBP14.32□□□□□ -0.12
PTCD3-217ENST00000488801 PIGBOS1A0A0B4J2F0 54 aa14.31□□□□□ -0.12
PTCD3-217ENST00000488801 MFSD2BA6NFX1 497 aa14.31□□□□□ -0.12
PTCD3-217ENST00000488801 BMPR1BO00238 502 aa14.31□□□□□ -0.12
PTCD3-217ENST00000488801 DEFA4P12838 97 aa14.31□□□□□ -0.12
PTCD3-217ENST00000488801 VAMP1P23763 118 aa14.31□□□□□ -0.12
PTCD3-217ENST00000488801 EGFEM1PQ0D2K5 195 aa14.31□□□□□ -0.12
PTCD3-217ENST00000488801 BSXQ3C1V8 233 aa14.31□□□□□ -0.12
PTCD3-217ENST00000488801 C1QL4Q86Z23 238 aa14.31□□□□□ -0.12
PTCD3-217ENST00000488801 DCUN1D4Q92564 292 aa14.31□□□□□ -0.12
PTCD3-217ENST00000488801 DPF1Q92782 380 aa14.31□□□□□ -0.12
PTCD3-217ENST00000488801 DLX4Q92988 240 aaPredicted RBP14.31□□□□□ -0.12
PTCD3-217ENST00000488801 C20orf85Q9H1P6 137 aa14.31□□□□□ -0.12
PTCD3-217ENST00000488801 PLEKHA3Q9HB20 300 aa14.31□□□□□ -0.12
PTCD3-217ENST00000488801 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.31□□□□□ -0.12
PTCD3-217ENST00000488801 C9orf170A2RU37 121 aa14.3□□□□□ -0.12
PTCD3-217ENST00000488801 OR4E1P0C645 316 aa14.3□□□□□ -0.12
PTCD3-217ENST00000488801 ZP3P21754 424 aa14.3□□□□□ -0.12
PTCD3-217ENST00000488801 MECP2P51608 486 aaKnown RBP14.3□□□□□ -0.12
PTCD3-217ENST00000488801 RAB25P57735 213 aa14.3□□□□□ -0.12
PTCD3-217ENST00000488801 SPCS3P61009 180 aa14.3□□□□□ -0.12
PTCD3-217ENST00000488801 DHRS2Q13268 280 aa14.3□□□□□ -0.12
PTCD3-217ENST00000488801 OR1L6Q8NGR2 347 aa14.3□□□□□ -0.12
PTCD3-217ENST00000488801 ZNF502Q8TBZ5 544 aa14.3□□□□□ -0.12
PTCD3-217ENST00000488801 GPR61Q9BZJ8 451 aa14.3□□□□□ -0.12
PTCD3-217ENST00000488801 ANKRD34BA5PLL1 514 aa14.29□□□□□ -0.12
PTCD3-217ENST00000488801 K7EIM0 57 aa14.29□□□□□ -0.12
PTCD3-217ENST00000488801 OVOL1O14753 267 aa14.29□□□□□ -0.12
PTCD3-217ENST00000488801 PITX3O75364 302 aa14.29□□□□□ -0.12
PTCD3-217ENST00000488801 HLA-AP01891 365 aaKnown RBP14.29□□□□□ -0.12
PTCD3-217ENST00000488801 TCRBP04435 133 aa14.29□□□□□ -0.12
PTCD3-217ENST00000488801 SULT1A3P0DMM9 295 aa14.29□□□□□ -0.12
PTCD3-217ENST00000488801 SULT1A4P0DMN0 295 aa14.29□□□□□ -0.12
PTCD3-217ENST00000488801 SLC25A6P12236 298 aa14.29□□□□□ -0.12
PTCD3-217ENST00000488801 ANXA7P20073 488 aaKnown RBP14.29□□□□□ -0.12
PTCD3-217ENST00000488801 KLF5Q13887 457 aaPredicted RBP14.29□□□□□ -0.12
PTCD3-217ENST00000488801 SPINK9Q5DT21 86 aa14.29□□□□□ -0.12
PTCD3-217ENST00000488801 LYG2Q86SG7 212 aa14.29□□□□□ -0.12
PTCD3-217ENST00000488801 VN1R17PQ8TDU5 208 aa14.29□□□□□ -0.12
PTCD3-217ENST00000488801 CXorf58Q96LI9 332 aa14.29□□□□□ -0.12
PTCD3-217ENST00000488801 THYN1Q9P016 225 aa14.29□□□□□ -0.12
PTCD3-217ENST00000488801 TRBV7-1A0A0A6YYK4 115 aa14.28□□□□□ -0.12
PTCD3-217ENST00000488801 F8W735 103 aaPredicted RBP14.28□□□□□ -0.12
PTCD3-217ENST00000488801 CYB5BO43169 146 aa14.28□□□□□ -0.12
PTCD3-217ENST00000488801 SMCO1Q147U7 214 aa14.28□□□□□ -0.12
PTCD3-217ENST00000488801 EEF1AKMT3Q96AZ1 226 aa14.28□□□□□ -0.12
PTCD3-217ENST00000488801 ATP6V0BQ99437 205 aa14.28□□□□□ -0.12
PTCD3-217ENST00000488801 PDCD10Q9BUL8 212 aa14.28□□□□□ -0.12
PTCD3-217ENST00000488801 HSPB7Q9UBY9 170 aa14.28□□□□□ -0.12
PTCD3-217ENST00000488801 A0A1B0GU03 582 aa14.27□□□□□ -0.13
PTCD3-217ENST00000488801 I3L2K1 104 aa14.27□□□□□ -0.13
PTCD3-217ENST00000488801 IFNA17P01571 189 aa14.27□□□□□ -0.13
PTCD3-217ENST00000488801 RNASE2P10153 161 aaKnown RBP14.27□□□□□ -0.13
PTCD3-217ENST00000488801 ACSM6Q6P461 480 aa14.27□□□□□ -0.13
PTCD3-217ENST00000488801 NUDT15Q9NV35 164 aa14.27□□□□□ -0.13
PTCD3-217ENST00000488801 CACFD1Q9UGQ2 172 aa14.27□□□□□ -0.13
PTCD3-217ENST00000488801 TMED3Q9Y3Q3 217 aa14.27□□□□□ -0.13
PTCD3-217ENST00000488801 SEC14L6B5MCN3 397 aa14.26□□□□□ -0.13
PTCD3-217ENST00000488801 PPP5D1E7EU14 171 aa14.26□□□□□ -0.13
PTCD3-217ENST00000488801 FCGR2BP31994 310 aaPredicted RBP14.26□□□□□ -0.13
PTCD3-217ENST00000488801 HOXA1P49639 335 aaPredicted RBP14.26□□□□□ -0.13
PTCD3-217ENST00000488801 ERHP84090 104 aaKnown RBP14.26□□□□□ -0.13
PTCD3-217ENST00000488801 TNFRSF9Q07011 255 aa14.26□□□□□ -0.13
PTCD3-217ENST00000488801 C9orf66Q5T8R8 295 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms