RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 TMEM249Q2WGJ8 235 aa10.35□□□□□ -0.75
CLIC4-202ENST00000488683 IGFL3Q6UXB1 125 aa10.35□□□□□ -0.75
CLIC4-202ENST00000488683 CCL17Q92583 94 aa10.35□□□□□ -0.75
CLIC4-202ENST00000488683 ZNF729A6NN14 1252 aaPredicted RBP10.34□□□□□ -0.75
CLIC4-202ENST00000488683 GCHFRP30047 84 aa10.34□□□□□ -0.75
CLIC4-202ENST00000488683 KIR2DS2P43631 304 aa10.34□□□□□ -0.75
CLIC4-202ENST00000488683 TCL1AP56279 114 aa10.34□□□□□ -0.75
CLIC4-202ENST00000488683 HSPE1P61604 102 aaKnown RBP10.34□□□□□ -0.75
CLIC4-202ENST00000488683 DEFA6Q01524 100 aa10.34□□□□□ -0.75
CLIC4-202ENST00000488683 ZNF600Q6ZNG1 722 aa10.34□□□□□ -0.75
CLIC4-202ENST00000488683 DOLPP1Q86YN1 238 aa10.34□□□□□ -0.75
CLIC4-202ENST00000488683 CISD2Q8N5K1 135 aaKnown RBP10.34□□□□□ -0.75
CLIC4-202ENST00000488683 SFRP2Q96HF1 295 aa10.34□□□□□ -0.75
CLIC4-202ENST00000488683 RITA1Q96K30 269 aa10.34□□□□□ -0.75
CLIC4-202ENST00000488683 LINC00479Q96M42 142 aa10.34□□□□□ -0.75
CLIC4-202ENST00000488683 MRPL20Q9BYC9 149 aaKnown RBP10.34□□□□□ -0.75
CLIC4-202ENST00000488683 NPVFQ9HCQ7 196 aa10.34□□□□□ -0.75
CLIC4-202ENST00000488683 FOXA2Q9Y261 457 aaPredicted RBP10.34□□□□□ -0.75
CLIC4-202ENST00000488683 TRAPPC1Q9Y5R8 145 aa10.34□□□□□ -0.75
CLIC4-202ENST00000488683 A0A1B0GV90 55 aa10.34□□□□□ -0.75
CLIC4-202ENST00000488683 PLAUP00749 431 aa10.34□□□□□ -0.75
CLIC4-202ENST00000488683 CD40P25942 277 aa10.34□□□□□ -0.75
CLIC4-202ENST00000488683 ADMP35318 185 aa10.34□□□□□ -0.75
CLIC4-202ENST00000488683 PSG5Q15238 335 aa10.34□□□□□ -0.75
CLIC4-202ENST00000488683 ACTL10Q5JWF8 245 aa10.34□□□□□ -0.75
CLIC4-202ENST00000488683 IGF2-ASQ6U949 168 aa10.34□□□□□ -0.75
CLIC4-202ENST00000488683 TEPPQ6URK8 271 aa10.34□□□□□ -0.75
CLIC4-202ENST00000488683 SGK494Q96LW2 274 aa10.34□□□□□ -0.75
CLIC4-202ENST00000488683 ITGB1BP1O14713 200 aa10.33□□□□□ -0.76
CLIC4-202ENST00000488683 SAA1P0DJI8 122 aaPredicted RBP10.33□□□□□ -0.76
CLIC4-202ENST00000488683 CRYBB3P26998 211 aa10.33□□□□□ -0.76
CLIC4-202ENST00000488683 ZNF788Q6ZQV5 615 aa10.33□□□□□ -0.76
CLIC4-202ENST00000488683 ACY3Q96HD9 319 aa10.33□□□□□ -0.76
CLIC4-202ENST00000488683 UHRF2Q96PU4 802 aa10.33□□□□□ -0.76
CLIC4-202ENST00000488683 RNASE7Q9H1E1 156 aaKnown RBP10.33□□□□□ -0.76
CLIC4-202ENST00000488683 ENY2Q9NPA8 101 aa10.33□□□□□ -0.76
CLIC4-202ENST00000488683 SLC35D1Q9NTN3 355 aa10.33□□□□□ -0.76
CLIC4-202ENST00000488683 IL19Q9UHD0 177 aa10.33□□□□□ -0.76
CLIC4-202ENST00000488683 A8MXE2 369 aa10.33□□□□□ -0.76
CLIC4-202ENST00000488683 CA1P00915 261 aaPredicted RBP10.33□□□□□ -0.76
CLIC4-202ENST00000488683 RNF224P0DH78 156 aa10.33□□□□□ -0.76
CLIC4-202ENST00000488683 MRPL41Q8IXM3 137 aaKnown RBP10.33□□□□□ -0.76
CLIC4-202ENST00000488683 ZNF664Q8N3J9 261 aa10.33□□□□□ -0.76
CLIC4-202ENST00000488683 TPSG1Q9NRR2 321 aa10.33□□□□□ -0.76
CLIC4-202ENST00000488683 TEX50A0A1B0GTY4 177 aa10.32□□□□□ -0.76
CLIC4-202ENST00000488683 LYNX1G3V0Z9 82 aa10.32□□□□□ -0.76
CLIC4-202ENST00000488683 OR7C2O60412 319 aa10.32□□□□□ -0.76
CLIC4-202ENST00000488683 CXorf1O96002 111 aa10.32□□□□□ -0.76
CLIC4-202ENST00000488683 LINC00869P0C866 280 aa10.32□□□□□ -0.76
CLIC4-202ENST00000488683 LYNX1P0DP58 116 aa10.32□□□□□ -0.76
CLIC4-202ENST00000488683 OR10J1P30954 320 aa10.32□□□□□ -0.76
CLIC4-202ENST00000488683 SRP14P37108 136 aaKnown RBP10.32□□□□□ -0.76
CLIC4-202ENST00000488683 KIAA1644Q3SXP7 199 aa10.32□□□□□ -0.76
CLIC4-202ENST00000488683 A0A087X0M5 115 aa10.32□□□□□ -0.76
CLIC4-202ENST00000488683 A0A0G2JNJ9 132 aa10.32□□□□□ -0.76
CLIC4-202ENST00000488683 MDFIC2A0A1B0GVS7 189 aa10.32□□□□□ -0.76
CLIC4-202ENST00000488683 A0A1B0GX30 115 aa10.32□□□□□ -0.76
CLIC4-202ENST00000488683 TYMSP04818 313 aa10.32□□□□□ -0.76
CLIC4-202ENST00000488683 CEACAM8P31997 349 aaPredicted RBP10.32□□□□□ -0.76
CLIC4-202ENST00000488683 TMEM144Q7Z5S9 345 aa10.32□□□□□ -0.76
CLIC4-202ENST00000488683 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.32□□□□□ -0.76
CLIC4-202ENST00000488683 ZNF503Q96F45 646 aa10.32□□□□□ -0.76
CLIC4-202ENST00000488683 NCOR1P1Q9H4R4 102 aa10.32□□□□□ -0.76
CLIC4-202ENST00000488683 Q9UFV3 132 aa10.32□□□□□ -0.76
CLIC4-202ENST00000488683 TP53TG5Q9Y2B4 290 aa10.32□□□□□ -0.76
CLIC4-202ENST00000488683 DPRXA6NFQ7 191 aa10.31□□□□□ -0.76
CLIC4-202ENST00000488683 RPL15P61313 204 aaKnown RBP10.31□□□□□ -0.76
CLIC4-202ENST00000488683 BSPH1Q075Z2 132 aa10.31□□□□□ -0.76
CLIC4-202ENST00000488683 C3orf36Q3SXR2 165 aa10.31□□□□□ -0.76
CLIC4-202ENST00000488683 COA6Q5JTJ3 125 aaKnown RBP10.31□□□□□ -0.76
CLIC4-202ENST00000488683 SFXN3Q9BWM7 321 aa10.31□□□□□ -0.76
CLIC4-202ENST00000488683 AKAP6Q13023 2319 aa10.31□□□□□ -0.76
CLIC4-202ENST00000488683 COL6A6A6NMZ7 2263 aa10.31□□□□□ -0.76
CLIC4-202ENST00000488683 DDTP30046 118 aa10.31□□□□□ -0.76
CLIC4-202ENST00000488683 SSX2Q16385 188 aa10.31□□□□□ -0.76
CLIC4-202ENST00000488683 SLC25A48Q6ZT89 311 aaKnown RBP10.31□□□□□ -0.76
CLIC4-202ENST00000488683 NABP2Q9BQ15 211 aa10.31□□□□□ -0.76
CLIC4-202ENST00000488683 PLEKHA3Q9HB20 300 aa10.31□□□□□ -0.76
CLIC4-202ENST00000488683 ELOVL5Q9NYP7 299 aa10.31□□□□□ -0.76
CLIC4-202ENST00000488683 MRPL36Q9P0J6 103 aaKnown RBP10.31□□□□□ -0.76
CLIC4-202ENST00000488683 RPUSD1Q9UJJ7 312 aaKnown RBP10.31□□□□□ -0.76
CLIC4-202ENST00000488683 MALRD1Q5VYJ5 2156 aa10.3□□□□□ -0.76
CLIC4-202ENST00000488683 H3BTX0 84 aa10.3□□□□□ -0.76
CLIC4-202ENST00000488683 CNN1P51911 297 aaKnown RBP10.3□□□□□ -0.76
CLIC4-202ENST00000488683 PRR20EP86478 221 aa10.3□□□□□ -0.76
CLIC4-202ENST00000488683 PRR20CP86479 221 aa10.3□□□□□ -0.76
CLIC4-202ENST00000488683 PRR20DP86480 221 aa10.3□□□□□ -0.76
CLIC4-202ENST00000488683 PRR20BP86481 221 aa10.3□□□□□ -0.76
CLIC4-202ENST00000488683 PRR20AP86496 221 aa10.3□□□□□ -0.76
CLIC4-202ENST00000488683 POU2AF1Q16633 256 aa10.3□□□□□ -0.76
CLIC4-202ENST00000488683 KRTCAP3Q53RY4 240 aa10.3□□□□□ -0.76
CLIC4-202ENST00000488683 TEX38Q6PEX7 206 aa10.3□□□□□ -0.76
CLIC4-202ENST00000488683 PQLC2Q6ZP29 291 aa10.3□□□□□ -0.76
CLIC4-202ENST00000488683 SLC25A10Q9UBX3 287 aaPredicted RBP10.3□□□□□ -0.76
CLIC4-202ENST00000488683 PYYP10082 97 aa10.3□□□□□ -0.76
CLIC4-202ENST00000488683 IER3P46695 156 aa10.3□□□□□ -0.76
CLIC4-202ENST00000488683 ZNF90Q03938 601 aa10.3□□□□□ -0.76
CLIC4-202ENST00000488683 TDRG1Q3Y452 100 aa10.3□□□□□ -0.76
CLIC4-202ENST00000488683 KCNIP4Q6PIL6 250 aa10.3□□□□□ -0.76
CLIC4-202ENST00000488683 DMRTC2Q8IXT2 367 aaPredicted RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms