RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 FANCD2OSQ96PS1 177 aa8.56□□□□□ -1.04
UBE4B-210ENST00000488228 SRSF8Q9BRL6 282 aaKnown RBP8.56□□□□□ -1.04
UBE4B-210ENST00000488228 PDCD10Q9BUL8 212 aa8.56□□□□□ -1.04
UBE4B-210ENST00000488228 S4R3C0 116 aa8.56□□□□□ -1.04
UBE4B-210ENST00000488228 IGLV11-55A0A075B6I3 123 aa8.55□□□□□ -1.04
UBE4B-210ENST00000488228 TRBV9A0A0B4J1U6 114 aa8.55□□□□□ -1.04
UBE4B-210ENST00000488228 C13orf42A0A1B0GVH6 325 aa8.55□□□□□ -1.04
UBE4B-210ENST00000488228 FAM223BA6NKX1 122 aa8.55□□□□□ -1.04
UBE4B-210ENST00000488228 I3L521 148 aa8.55□□□□□ -1.04
UBE4B-210ENST00000488228 BRI3O95415 125 aa8.55□□□□□ -1.04
UBE4B-210ENST00000488228 TRBV12-3P01733 135 aa8.55□□□□□ -1.04
UBE4B-210ENST00000488228 DEFA4P12838 97 aa8.55□□□□□ -1.04
UBE4B-210ENST00000488228 SMCO1Q147U7 214 aa8.55□□□□□ -1.04
UBE4B-210ENST00000488228 C15orf32Q32M92 178 aa8.55□□□□□ -1.04
UBE4B-210ENST00000488228 AARDQ4LEZ3 155 aa8.55□□□□□ -1.04
UBE4B-210ENST00000488228 GGNBP1Q5YKI7 109 aa8.55□□□□□ -1.04
UBE4B-210ENST00000488228 TREML4Q6UXN2 200 aa8.55□□□□□ -1.04
UBE4B-210ENST00000488228 HSD17B13Q7Z5P4 300 aaPredicted RBP8.55□□□□□ -1.04
UBE4B-210ENST00000488228 FAM223AQ8IWN6 122 aa8.55□□□□□ -1.04
UBE4B-210ENST00000488228 OR2C3Q8N628 320 aa8.55□□□□□ -1.04
UBE4B-210ENST00000488228 NECAP1Q8NC96 275 aa8.55□□□□□ -1.04
UBE4B-210ENST00000488228 COQ8AQ8NI60 647 aa8.55□□□□□ -1.04
UBE4B-210ENST00000488228 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.55□□□□□ -1.04
UBE4B-210ENST00000488228 FBXL7Q9UJT9 491 aa8.55□□□□□ -1.04
UBE4B-210ENST00000488228 F11RQ9Y624 299 aaKnown RBP8.55□□□□□ -1.04
UBE4B-210ENST00000488228 IGHV4OR15-8A0A075B7B6 117 aa8.54□□□□□ -1.04
UBE4B-210ENST00000488228 A0A087WW49 117 aa8.54□□□□□ -1.04
UBE4B-210ENST00000488228 ANKRD34BA5PLL1 514 aa8.54□□□□□ -1.04
UBE4B-210ENST00000488228 MFSD2BA6NFX1 497 aa8.54□□□□□ -1.04
UBE4B-210ENST00000488228 MPTX1A8MV57 137 aa8.54□□□□□ -1.04
UBE4B-210ENST00000488228 CCL24O00175 119 aa8.54□□□□□ -1.04
UBE4B-210ENST00000488228 CCSO14618 274 aa8.54□□□□□ -1.04
UBE4B-210ENST00000488228 NDUFB8O95169 186 aa8.54□□□□□ -1.04
UBE4B-210ENST00000488228 DHFRP00374 187 aa8.54□□□□□ -1.04
UBE4B-210ENST00000488228 IGHV3-23P01764 117 aa8.54□□□□□ -1.04
UBE4B-210ENST00000488228 FHL3Q13643 280 aa8.54□□□□□ -1.04
UBE4B-210ENST00000488228 MRPL41Q8IXM3 137 aaKnown RBP8.54□□□□□ -1.04
UBE4B-210ENST00000488228 OR11H1Q8NG94 326 aa8.54□□□□□ -1.04
UBE4B-210ENST00000488228 OR1S1Q8NH92 325 aa8.54□□□□□ -1.04
UBE4B-210ENST00000488228 ZNF431Q8TF32 576 aaPredicted RBP8.54□□□□□ -1.04
UBE4B-210ENST00000488228 MITD1Q8WV92 249 aa8.54□□□□□ -1.04
UBE4B-210ENST00000488228 P2RX4Q99571 388 aa8.54□□□□□ -1.04
UBE4B-210ENST00000488228 TMED3Q9Y3Q3 217 aa8.54□□□□□ -1.04
UBE4B-210ENST00000488228 FBN3Q75N90 2809 aa8.53□□□□□ -1.04
UBE4B-210ENST00000488228 IGHV3-21A0A0B4J1V1 117 aa8.53□□□□□ -1.04
UBE4B-210ENST00000488228 PIGBOS1A0A0B4J2F0 54 aa8.53□□□□□ -1.04
UBE4B-210ENST00000488228 A0A0G2JLM5 398 aa8.53□□□□□ -1.04
UBE4B-210ENST00000488228 A0A1B0GU03 582 aa8.53□□□□□ -1.04
UBE4B-210ENST00000488228 CEBPZOSA8MTT3 80 aa8.53□□□□□ -1.04
UBE4B-210ENST00000488228 SLURP1P55000 103 aa8.53□□□□□ -1.04
UBE4B-210ENST00000488228 SPCS3P61009 180 aa8.53□□□□□ -1.04
UBE4B-210ENST00000488228 RUNX1Q01196 453 aa8.53□□□□□ -1.04
UBE4B-210ENST00000488228 ATP5G2Q06055 141 aa8.53□□□□□ -1.04
UBE4B-210ENST00000488228 TNFRSF9Q07011 255 aa8.53□□□□□ -1.04
UBE4B-210ENST00000488228 ZNF616Q08AN1 781 aa8.53□□□□□ -1.04
UBE4B-210ENST00000488228 PLET1Q6UQ28 207 aa8.53□□□□□ -1.04
UBE4B-210ENST00000488228 LINC00482Q8N8I6 264 aa8.53□□□□□ -1.04
UBE4B-210ENST00000488228 UXS1Q8NBZ7 420 aa8.53□□□□□ -1.04
UBE4B-210ENST00000488228 ZNF114Q8NC26 417 aa8.53□□□□□ -1.04
UBE4B-210ENST00000488228 DUSP18Q8NEJ0 188 aa8.53□□□□□ -1.04
UBE4B-210ENST00000488228 CCDC140Q96MF4 163 aa8.53□□□□□ -1.04
UBE4B-210ENST00000488228 ENY2Q9NPA8 101 aa8.53□□□□□ -1.04
UBE4B-210ENST00000488228 HSPB7Q9UBY9 170 aa8.53□□□□□ -1.04
UBE4B-210ENST00000488228 INMT-MINDY4F8WBC2 141 aa8.52□□□□□ -1.05
UBE4B-210ENST00000488228 PITX3O75364 302 aa8.52□□□□□ -1.05
UBE4B-210ENST00000488228 PTTG1O95997 202 aa8.52□□□□□ -1.05
UBE4B-210ENST00000488228 RNASE2P10153 161 aaKnown RBP8.52□□□□□ -1.05
UBE4B-210ENST00000488228 HIST1H1BP16401 226 aaKnown RBP8.52□□□□□ -1.05
UBE4B-210ENST00000488228 MYCNOSP40205 109 aa8.52□□□□□ -1.05
UBE4B-210ENST00000488228 DCTN2Q13561 401 aaKnown RBP8.52□□□□□ -1.05
UBE4B-210ENST00000488228 PDLIM3Q53GG5 364 aaPredicted RBP8.52□□□□□ -1.05
UBE4B-210ENST00000488228 SLC25A24Q6NUK1 477 aa8.52□□□□□ -1.05
UBE4B-210ENST00000488228 ZNF343Q6P1L6 599 aa8.52□□□□□ -1.05
UBE4B-210ENST00000488228 C12orf45Q8N5I9 185 aaPredicted RBP8.52□□□□□ -1.05
UBE4B-210ENST00000488228 OR1N2Q8NGR9 330 aa8.52□□□□□ -1.05
UBE4B-210ENST00000488228 OR1P1Q8NH06 330 aa8.52□□□□□ -1.05
UBE4B-210ENST00000488228 OR52E5Q8NH55 327 aa8.52□□□□□ -1.05
UBE4B-210ENST00000488228 MISP3Q96FF7 219 aa8.52□□□□□ -1.05
UBE4B-210ENST00000488228 USMG5Q96IX5 58 aa8.52□□□□□ -1.05
UBE4B-210ENST00000488228 RBKSQ9H477 322 aa8.52□□□□□ -1.05
UBE4B-210ENST00000488228 PALMDQ9NP74 551 aa8.52□□□□□ -1.05
UBE4B-210ENST00000488228 HEYLQ9NQ87 328 aaPredicted RBP8.52□□□□□ -1.05
UBE4B-210ENST00000488228 PPP5D1E7EU14 171 aa8.51□□□□□ -1.05
UBE4B-210ENST00000488228 INS-IGF2F8WCM5 200 aa8.51□□□□□ -1.05
UBE4B-210ENST00000488228 LINC01619G3V211 115 aa8.51□□□□□ -1.05
UBE4B-210ENST00000488228 IFNA21P01568 189 aa8.51□□□□□ -1.05
UBE4B-210ENST00000488228 IL5P05113 134 aa8.51□□□□□ -1.05
UBE4B-210ENST00000488228 IAPPP10997 89 aa8.51□□□□□ -1.05
UBE4B-210ENST00000488228 SLC25A6P12236 298 aa8.51□□□□□ -1.05
UBE4B-210ENST00000488228 CD33P20138 364 aa8.51□□□□□ -1.05
UBE4B-210ENST00000488228 ERHP84090 104 aaKnown RBP8.51□□□□□ -1.05
UBE4B-210ENST00000488228 KLK9Q2XQG4 91 aa8.51□□□□□ -1.05
UBE4B-210ENST00000488228 SLC24A4Q8NFF2 622 aa8.51□□□□□ -1.05
UBE4B-210ENST00000488228 DTD1Q8TEA8 209 aa8.51□□□□□ -1.05
UBE4B-210ENST00000488228 DPF1Q92782 380 aa8.51□□□□□ -1.05
UBE4B-210ENST00000488228 PINX1Q96BK5 328 aaKnown RBP8.51□□□□□ -1.05
UBE4B-210ENST00000488228 OR10C1Q96KK4 312 aa8.51□□□□□ -1.05
UBE4B-210ENST00000488228 MARVELD1Q9BSK0 173 aa8.51□□□□□ -1.05
UBE4B-210ENST00000488228 MAGT1Q9H0U3 335 aa8.51□□□□□ -1.05
UBE4B-210ENST00000488228 KLK9Q9UKQ9 250 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms