RNA–Protein interactions for RNA: ENST00000488072.1

SHROOM1-205, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-205ENST00000488072 G3V4G9 280 aa13.21□□□□□ -0.29
SHROOM1-205ENST00000488072 IFNA17P01571 189 aa13.21□□□□□ -0.29
SHROOM1-205ENST00000488072 IGHV3-48P01763 117 aa13.21□□□□□ -0.29
SHROOM1-205ENST00000488072 H2AFB2P0C5Z0 115 aa13.21□□□□□ -0.29
SHROOM1-205ENST00000488072 ANXA3P12429 323 aa13.21□□□□□ -0.29
SHROOM1-205ENST00000488072 DEFA4P12838 97 aa13.21□□□□□ -0.29
SHROOM1-205ENST00000488072 MYCNOSP40205 109 aa13.21□□□□□ -0.29
SHROOM1-205ENST00000488072 C15orf32Q32M92 178 aa13.21□□□□□ -0.29
SHROOM1-205ENST00000488072 C4orf46Q504U0 113 aa13.21□□□□□ -0.29
SHROOM1-205ENST00000488072 SLC25A24Q6NUK1 477 aa13.21□□□□□ -0.29
SHROOM1-205ENST00000488072 LYG2Q86SG7 212 aa13.21□□□□□ -0.29
SHROOM1-205ENST00000488072 ZNF429Q86V71 674 aa13.21□□□□□ -0.29
SHROOM1-205ENST00000488072 OR2C3Q8N628 320 aa13.21□□□□□ -0.29
SHROOM1-205ENST00000488072 IL22RA2Q969J5 263 aa13.21□□□□□ -0.29
SHROOM1-205ENST00000488072 ZC4H2Q9NQZ6 224 aa13.21□□□□□ -0.29
SHROOM1-205ENST00000488072 FKBP11Q9NYL4 201 aa13.21□□□□□ -0.29
SHROOM1-205ENST00000488072 SHPKQ9UHJ6 478 aa13.21□□□□□ -0.29
SHROOM1-205ENST00000488072 PPP5D1E7EU14 171 aa13.2□□□□□ -0.3
SHROOM1-205ENST00000488072 ATG12O94817 140 aa13.2□□□□□ -0.3
SHROOM1-205ENST00000488072 BRI3O95415 125 aa13.2□□□□□ -0.3
SHROOM1-205ENST00000488072 FGF2P09038 288 aa13.2□□□□□ -0.3
SHROOM1-205ENST00000488072 RUNX1Q01196 453 aa13.2□□□□□ -0.3
SHROOM1-205ENST00000488072 ATP5G2Q06055 141 aa13.2□□□□□ -0.3
SHROOM1-205ENST00000488072 FHL3Q13643 280 aa13.2□□□□□ -0.3
SHROOM1-205ENST00000488072 EXOSC2Q13868 293 aaKnown RBP13.2□□□□□ -0.3
SHROOM1-205ENST00000488072 GGNBP1Q5YKI7 109 aa13.2□□□□□ -0.3
SHROOM1-205ENST00000488072 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.2□□□□□ -0.3
SHROOM1-205ENST00000488072 F11RQ9Y624 299 aaKnown RBP13.2□□□□□ -0.3
SHROOM1-205ENST00000488072 SULT1A3P0DMM9 295 aa13.19□□□□□ -0.3
SHROOM1-205ENST00000488072 SULT1A4P0DMN0 295 aa13.19□□□□□ -0.3
SHROOM1-205ENST00000488072 MZT2BQ6NZ67 158 aa13.19□□□□□ -0.3
SHROOM1-205ENST00000488072 ZNF343Q6P1L6 599 aa13.19□□□□□ -0.3
SHROOM1-205ENST00000488072 LRTM2Q8N967 370 aa13.19□□□□□ -0.3
SHROOM1-205ENST00000488072 WFDC9Q8NEX5 89 aa13.19□□□□□ -0.3
SHROOM1-205ENST00000488072 DCUN1D4Q92564 292 aa13.19□□□□□ -0.3
SHROOM1-205ENST00000488072 DLX4Q92988 240 aaPredicted RBP13.19□□□□□ -0.3
SHROOM1-205ENST00000488072 CCDC140Q96MF4 163 aa13.19□□□□□ -0.3
SHROOM1-205ENST00000488072 PLEKHA3Q9HB20 300 aa13.19□□□□□ -0.3
SHROOM1-205ENST00000488072 NBEAL1Q6ZS30 2694 aa13.18□□□□□ -0.3
SHROOM1-205ENST00000488072 CCSO14618 274 aa13.18□□□□□ -0.3
SHROOM1-205ENST00000488072 CD33P20138 364 aa13.18□□□□□ -0.3
SHROOM1-205ENST00000488072 HOXA1P49639 335 aaPredicted RBP13.18□□□□□ -0.3
SHROOM1-205ENST00000488072 ZNF616Q08AN1 781 aa13.18□□□□□ -0.3
SHROOM1-205ENST00000488072 KLK9Q2XQG4 91 aa13.18□□□□□ -0.3
SHROOM1-205ENST00000488072 AARDQ4LEZ3 155 aa13.18□□□□□ -0.3
SHROOM1-205ENST00000488072 CLEC19AQ6UXS0 136 aa13.18□□□□□ -0.3
SHROOM1-205ENST00000488072 NECAP1Q8NC96 275 aa13.18□□□□□ -0.3
SHROOM1-205ENST00000488072 ENKURQ8TC29 256 aa13.18□□□□□ -0.3
SHROOM1-205ENST00000488072 TMEM170AQ8WVE7 144 aa13.18□□□□□ -0.3
SHROOM1-205ENST00000488072 SRSF8Q9BRL6 282 aaKnown RBP13.18□□□□□ -0.3
SHROOM1-205ENST00000488072 KLK9Q9UKQ9 250 aa13.18□□□□□ -0.3
SHROOM1-205ENST00000488072 NOTCH3Q9UM47 2321 aa13.17□□□□□ -0.3
SHROOM1-205ENST00000488072 LINC01619G3V211 115 aa13.17□□□□□ -0.3
SHROOM1-205ENST00000488072 K7EIM0 57 aa13.17□□□□□ -0.3
SHROOM1-205ENST00000488072 BMPR1BO00238 502 aa13.17□□□□□ -0.3
SHROOM1-205ENST00000488072 PITX3O75364 302 aa13.17□□□□□ -0.3
SHROOM1-205ENST00000488072 PRB2P02812 416 aaPredicted RBP13.17□□□□□ -0.3
SHROOM1-205ENST00000488072 HSPB1P04792 205 aaKnown RBP13.17□□□□□ -0.3
SHROOM1-205ENST00000488072 RNASE2P10153 161 aaKnown RBP13.17□□□□□ -0.3
SHROOM1-205ENST00000488072 EDN2P20800 178 aa13.17□□□□□ -0.3
SHROOM1-205ENST00000488072 SMCO1Q147U7 214 aa13.17□□□□□ -0.3
SHROOM1-205ENST00000488072 MLANAQ16655 118 aa13.17□□□□□ -0.3
SHROOM1-205ENST00000488072 DPF1Q92782 380 aa13.17□□□□□ -0.3
SHROOM1-205ENST00000488072 USMG5Q96IX5 58 aa13.17□□□□□ -0.3
SHROOM1-205ENST00000488072 MAGT1Q9H0U3 335 aa13.17□□□□□ -0.3
SHROOM1-205ENST00000488072 RBKSQ9H477 322 aa13.17□□□□□ -0.3
SHROOM1-205ENST00000488072 PEF1Q9UBV8 284 aaKnown RBP13.17□□□□□ -0.3
SHROOM1-205ENST00000488072 A0A0G2JLM5 398 aa13.16□□□□□ -0.3
SHROOM1-205ENST00000488072 FAM223BA6NKX1 122 aa13.16□□□□□ -0.3
SHROOM1-205ENST00000488072 CEBPZOSA8MTT3 80 aa13.16□□□□□ -0.3
SHROOM1-205ENST00000488072 DUS4LO95620 317 aaKnown RBP13.16□□□□□ -0.3
SHROOM1-205ENST00000488072 HOXD3P31249 432 aaPredicted RBP13.16□□□□□ -0.3
SHROOM1-205ENST00000488072 SPCS3P61009 180 aa13.16□□□□□ -0.3
SHROOM1-205ENST00000488072 SRPXP78539 464 aa13.16□□□□□ -0.3
SHROOM1-205ENST00000488072 THOC7Q6I9Y2 204 aaKnown RBP13.16□□□□□ -0.3
SHROOM1-205ENST00000488072 FAM223AQ8IWN6 122 aa13.16□□□□□ -0.3
SHROOM1-205ENST00000488072 UXS1Q8NBZ7 420 aa13.16□□□□□ -0.3
SHROOM1-205ENST00000488072 OR1S1Q8NH92 325 aa13.16□□□□□ -0.3
SHROOM1-205ENST00000488072 MISP3Q96FF7 219 aa13.16□□□□□ -0.3
SHROOM1-205ENST00000488072 OR10C1Q96KK4 312 aa13.16□□□□□ -0.3
SHROOM1-205ENST00000488072 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.15□□□□□ -0.3
SHROOM1-205ENST00000488072 IGHV3-35A0A0C4DH35 117 aa13.15□□□□□ -0.3
SHROOM1-205ENST00000488072 F8W735 103 aaPredicted RBP13.15□□□□□ -0.3
SHROOM1-205ENST00000488072 IAPPP10997 89 aa13.15□□□□□ -0.3
SHROOM1-205ENST00000488072 SAMD5Q5TGI4 173 aa13.15□□□□□ -0.3
SHROOM1-205ENST00000488072 HAPLN4Q86UW8 402 aa13.15□□□□□ -0.3
SHROOM1-205ENST00000488072 DUSP18Q8NEJ0 188 aa13.15□□□□□ -0.3
SHROOM1-205ENST00000488072 OR52E5Q8NH55 327 aa13.15□□□□□ -0.3
SHROOM1-205ENST00000488072 MITD1Q8WV92 249 aa13.15□□□□□ -0.3
SHROOM1-205ENST00000488072 PDCD10Q9BUL8 212 aa13.15□□□□□ -0.3
SHROOM1-205ENST00000488072 MRPL36Q9P0J6 103 aaKnown RBP13.15□□□□□ -0.3
SHROOM1-205ENST00000488072 SELENOKQ9Y6D0 94 aa13.15□□□□□ -0.3
SHROOM1-205ENST00000488072 A0A1B0GU03 582 aa13.14□□□□□ -0.31
SHROOM1-205ENST00000488072 I3L2K1 104 aa13.14□□□□□ -0.31
SHROOM1-205ENST00000488072 OR2C1O95371 312 aa13.14□□□□□ -0.31
SHROOM1-205ENST00000488072 GPR183P32249 361 aa13.14□□□□□ -0.31
SHROOM1-205ENST00000488072 ERHP84090 104 aaKnown RBP13.14□□□□□ -0.31
SHROOM1-205ENST00000488072 TNFRSF9Q07011 255 aa13.14□□□□□ -0.31
SHROOM1-205ENST00000488072 HSD17B13Q7Z5P4 300 aaPredicted RBP13.14□□□□□ -0.31
SHROOM1-205ENST00000488072 OR1P1Q8NH06 330 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms