RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 SPACA1Q9HBV2 294 aa8.68□□□□□ -1.02
TRIM56-204ENST00000487252 PARP11Q9NR21 331 aa8.68□□□□□ -1.02
TRIM56-204ENST00000487252 PRR13Q9NZ81 148 aa8.68□□□□□ -1.02
TRIM56-204ENST00000487252 LOC102724200A0A096LPH7 203 aaPredicted RBP8.67□□□□□ -1.02
TRIM56-204ENST00000487252 A0A1W2PN81 502 aa8.67□□□□□ -1.02
TRIM56-204ENST00000487252 C16orf90A8MZG2 172 aa8.67□□□□□ -1.02
TRIM56-204ENST00000487252 TUSC2O75896 110 aa8.67□□□□□ -1.02
TRIM56-204ENST00000487252 OR2H2O95918 312 aa8.67□□□□□ -1.02
TRIM56-204ENST00000487252 CHRNA7P36544 502 aa8.67□□□□□ -1.02
TRIM56-204ENST00000487252 KCNJ3P48549 501 aa8.67□□□□□ -1.02
TRIM56-204ENST00000487252 PIGPP57054 158 aa8.67□□□□□ -1.02
TRIM56-204ENST00000487252 SYNJ2BPP57105 145 aa8.67□□□□□ -1.02
TRIM56-204ENST00000487252 RND3P61587 244 aa8.67□□□□□ -1.02
TRIM56-204ENST00000487252 NDPQ00604 133 aa8.67□□□□□ -1.02
TRIM56-204ENST00000487252 LGALS9BQ3B8N2 356 aa8.67□□□□□ -1.02
TRIM56-204ENST00000487252 CD300EQ496F6 205 aaPredicted RBP8.67□□□□□ -1.02
TRIM56-204ENST00000487252 LRRC37A5PQ49AS3 106 aa8.67□□□□□ -1.02
TRIM56-204ENST00000487252 HSD17B13Q7Z5P4 300 aaPredicted RBP8.67□□□□□ -1.02
TRIM56-204ENST00000487252 Q8IYB0 196 aa8.67□□□□□ -1.02
TRIM56-204ENST00000487252 INO80EQ8NBZ0 244 aaPredicted RBP8.67□□□□□ -1.02
TRIM56-204ENST00000487252 OR1S1Q8NH92 325 aa8.67□□□□□ -1.02
TRIM56-204ENST00000487252 RRNAD1Q96FB5 475 aaKnown RBP8.67□□□□□ -1.02
TRIM56-204ENST00000487252 CYTL1Q9NRR1 136 aa8.67□□□□□ -1.02
TRIM56-204ENST00000487252 IDI2-AS1Q9NZ38 188 aa8.67□□□□□ -1.02
TRIM56-204ENST00000487252 FBXL7Q9UJT9 491 aa8.67□□□□□ -1.02
TRIM56-204ENST00000487252 A0A1W2PPE3 182 aa8.66□□□□□ -1.02
TRIM56-204ENST00000487252 MPTX1A8MV57 137 aa8.66□□□□□ -1.02
TRIM56-204ENST00000487252 TRDCB7Z8K6 153 aa8.66□□□□□ -1.02
TRIM56-204ENST00000487252 SIRPB1O00241 398 aa8.66□□□□□ -1.02
TRIM56-204ENST00000487252 SPDEFO95238 335 aa8.66□□□□□ -1.02
TRIM56-204ENST00000487252 FGF2P09038 288 aa8.66□□□□□ -1.02
TRIM56-204ENST00000487252 CTXN2P0C2S0 81 aa8.66□□□□□ -1.02
TRIM56-204ENST00000487252 PET100P0DJ07 73 aa8.66□□□□□ -1.02
TRIM56-204ENST00000487252 AADACP22760 399 aa8.66□□□□□ -1.02
TRIM56-204ENST00000487252 KIR2DS2P43631 304 aa8.66□□□□□ -1.02
TRIM56-204ENST00000487252 GNG10P50151 68 aa8.66□□□□□ -1.02
TRIM56-204ENST00000487252 ATXN7L3Q14CW9 347 aaPredicted RBP8.66□□□□□ -1.02
TRIM56-204ENST00000487252 TMEM177Q53S58 311 aa8.66□□□□□ -1.02
TRIM56-204ENST00000487252 KRBOX4Q5JUW0 171 aa8.66□□□□□ -1.02
TRIM56-204ENST00000487252 GGNBP1Q5YKI7 109 aa8.66□□□□□ -1.02
TRIM56-204ENST00000487252 Q6P435 159 aa8.66□□□□□ -1.02
TRIM56-204ENST00000487252 FAM58AQ8N1B3 248 aa8.66□□□□□ -1.02
TRIM56-204ENST00000487252 CCDC71LQ8N9Z2 235 aa8.66□□□□□ -1.02
TRIM56-204ENST00000487252 SUMF2Q8NBJ7 301 aa8.66□□□□□ -1.02
TRIM56-204ENST00000487252 CXorf58Q96LI9 332 aa8.66□□□□□ -1.02
TRIM56-204ENST00000487252 ZC4H2Q9NQZ6 224 aa8.66□□□□□ -1.02
TRIM56-204ENST00000487252 SDHAF2Q9NX18 166 aa8.66□□□□□ -1.02
TRIM56-204ENST00000487252 CALYQ9NYX4 217 aa8.66□□□□□ -1.02
TRIM56-204ENST00000487252 KCNIP3Q9Y2W7 256 aa8.66□□□□□ -1.02
TRIM56-204ENST00000487252 TRAV24A0A0B4J272 114 aa8.65□□□□□ -1.02
TRIM56-204ENST00000487252 PPYP01298 95 aa8.65□□□□□ -1.02
TRIM56-204ENST00000487252 IFNA21P01568 189 aa8.65□□□□□ -1.02
TRIM56-204ENST00000487252 IFNA4P05014 189 aa8.65□□□□□ -1.02
TRIM56-204ENST00000487252 HOXB5P09067 269 aa8.65□□□□□ -1.02
TRIM56-204ENST00000487252 INAFM2P0DMQ5 153 aa8.65□□□□□ -1.02
TRIM56-204ENST00000487252 EGR2P11161 476 aaPredicted RBP8.65□□□□□ -1.02
TRIM56-204ENST00000487252 HERV-K104P61576 105 aa8.65□□□□□ -1.02
TRIM56-204ENST00000487252 RAB32Q13637 225 aa8.65□□□□□ -1.02
TRIM56-204ENST00000487252 IAH1Q2TAA2 248 aaPredicted RBP8.65□□□□□ -1.02
TRIM56-204ENST00000487252 CCDC28AQ8IWP9 274 aa8.65□□□□□ -1.02
TRIM56-204ENST00000487252 GAPTQ8N292 157 aa8.65□□□□□ -1.02
TRIM56-204ENST00000487252 LINC00311Q8N616 119 aa8.65□□□□□ -1.02
TRIM56-204ENST00000487252 OR10A7Q8NGE5 316 aa8.65□□□□□ -1.02
TRIM56-204ENST00000487252 MRPL30Q8TCC3 161 aaKnown RBP8.65□□□□□ -1.02
TRIM56-204ENST00000487252 CABLES2Q9BTV7 478 aa8.65□□□□□ -1.02
TRIM56-204ENST00000487252 NCOR1P1Q9H4R4 102 aa8.65□□□□□ -1.02
TRIM56-204ENST00000487252 SLC2A9Q9NRM0 540 aa8.65□□□□□ -1.02
TRIM56-204ENST00000487252 OR5AC2Q9NZP5 309 aa8.65□□□□□ -1.02
TRIM56-204ENST00000487252 PFDN2Q9UHV9 154 aa8.65□□□□□ -1.02
TRIM56-204ENST00000487252 HMCN2Q8NDA2 5059 aa8.65□□□□□ -1.03
TRIM56-204ENST00000487252 TAAR5O14804 337 aa8.64□□□□□ -1.03
TRIM56-204ENST00000487252 OR5AC1P0C628 307 aa8.64□□□□□ -1.03
TRIM56-204ENST00000487252 RBMY1A1P0DJD3 496 aaKnown RBP8.64□□□□□ -1.03
TRIM56-204ENST00000487252 PRKACAP17612 351 aa8.64□□□□□ -1.03
TRIM56-204ENST00000487252 NUP62P37198 522 aaPredicted RBP8.64□□□□□ -1.03
TRIM56-204ENST00000487252 NANOS2P60321 138 aaKnown RBP8.64□□□□□ -1.03
TRIM56-204ENST00000487252 SRPXP78539 464 aa8.64□□□□□ -1.03
TRIM56-204ENST00000487252 MMDQ15546 238 aa8.64□□□□□ -1.03
TRIM56-204ENST00000487252 ECSCRQ19T08 205 aa8.64□□□□□ -1.03
TRIM56-204ENST00000487252 DEFB135Q30KP9 77 aa8.64□□□□□ -1.03
TRIM56-204ENST00000487252 PAN3Q58A45 887 aaKnown RBP8.64□□□□□ -1.03
TRIM56-204ENST00000487252 IGSF11Q5DX21 431 aa8.64□□□□□ -1.03
TRIM56-204ENST00000487252 LGI3Q8N145 548 aa8.64□□□□□ -1.03
TRIM56-204ENST00000487252 C8orf31Q8N9H6 132 aa8.64□□□□□ -1.03
TRIM56-204ENST00000487252 ZNF565Q8N9K5 539 aa8.64□□□□□ -1.03
TRIM56-204ENST00000487252 OR13A1Q8NGR1 328 aa8.64□□□□□ -1.03
TRIM56-204ENST00000487252 LRRC20Q8TCA0 184 aa8.64□□□□□ -1.03
TRIM56-204ENST00000487252 GLYATL2Q8WU03 294 aa8.64□□□□□ -1.03
TRIM56-204ENST00000487252 ZNF471Q9BX82 626 aaPredicted RBP8.64□□□□□ -1.03
TRIM56-204ENST00000487252 SLC5A7Q9GZV3 580 aa8.64□□□□□ -1.03
TRIM56-204ENST00000487252 FAT1Q14517 4588 aa8.64□□□□□ -1.03
TRIM56-204ENST00000487252 FLG2Q5D862 2391 aaPredicted RBP8.63□□□□□ -1.03
TRIM56-204ENST00000487252 IGKV1-6A0A0C4DH72 117 aa8.63□□□□□ -1.03
TRIM56-204ENST00000487252 SH2D1BO14796 132 aa8.63□□□□□ -1.03
TRIM56-204ENST00000487252 MPPED1O15442 326 aa8.63□□□□□ -1.03
TRIM56-204ENST00000487252 DIRAS3O95661 229 aa8.63□□□□□ -1.03
TRIM56-204ENST00000487252 SCTP09683 121 aa8.63□□□□□ -1.03
TRIM56-204ENST00000487252 TPT1P13693 172 aaKnown RBP8.63□□□□□ -1.03
TRIM56-204ENST00000487252 GNRHRP30968 328 aa8.63□□□□□ -1.03
TRIM56-204ENST00000487252 ZNF137PP52743 207 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms