RNA–Protein interactions for RNA: ENST00000487211.5

RTFDC1-209, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-209ENST00000487211 COL7A1Q02388 2944 aa4.81□□□□□ -1.64
RTFDC1-209ENST00000487211 ABCA13Q86UQ4 5058 aa4.81□□□□□ -1.64
RTFDC1-209ENST00000487211 KIAA1109Q2LD37 5005 aa4.81□□□□□ -1.64
RTFDC1-209ENST00000487211 ZNF320A2RRD8 509 aa4.81□□□□□ -1.64
RTFDC1-209ENST00000487211 OR5H14A6NHG9 310 aa4.81□□□□□ -1.64
RTFDC1-209ENST00000487211 FCN1O00602 326 aa4.81□□□□□ -1.64
RTFDC1-209ENST00000487211 ST8SIA3O43173 380 aa4.81□□□□□ -1.64
RTFDC1-209ENST00000487211 TNFSF12O43508 249 aa4.81□□□□□ -1.64
RTFDC1-209ENST00000487211 GSTZ1O43708 216 aaPredicted RBP4.81□□□□□ -1.64
RTFDC1-209ENST00000487211 CD74P04233 296 aa4.81□□□□□ -1.64
RTFDC1-209ENST00000487211 ZNF735P0CB33 412 aa4.81□□□□□ -1.64
RTFDC1-209ENST00000487211 RCVRNP35243 200 aa4.81□□□□□ -1.64
RTFDC1-209ENST00000487211 ETV6P41212 452 aa4.81□□□□□ -1.64
RTFDC1-209ENST00000487211 FXYD4P59646 89 aa4.81□□□□□ -1.64
RTFDC1-209ENST00000487211 ZNF79Q15937 498 aa4.81□□□□□ -1.64
RTFDC1-209ENST00000487211 CNPY1Q3B7I2 92 aa4.81□□□□□ -1.64
RTFDC1-209ENST00000487211 VAX1Q5SQQ9 334 aa4.81□□□□□ -1.64
RTFDC1-209ENST00000487211 AADACL3Q5VUY0 350 aa4.81□□□□□ -1.64
RTFDC1-209ENST00000487211 C12orf54Q6X4T0 127 aa4.81□□□□□ -1.64
RTFDC1-209ENST00000487211 FAM71E2Q8N5Q1 922 aa4.81□□□□□ -1.64
RTFDC1-209ENST00000487211 TMEM229BQ8NBD8 167 aa4.81□□□□□ -1.64
RTFDC1-209ENST00000487211 UXS1Q8NBZ7 420 aa4.81□□□□□ -1.64
RTFDC1-209ENST00000487211 NPBQ8NG41 125 aa4.81□□□□□ -1.64
RTFDC1-209ENST00000487211 OR6F1Q8NGZ6 308 aa4.81□□□□□ -1.64
RTFDC1-209ENST00000487211 C15orf40Q8WUR7 153 aa4.81□□□□□ -1.64
RTFDC1-209ENST00000487211 SMIM4Q8WVI0 70 aa4.81□□□□□ -1.64
RTFDC1-209ENST00000487211 HSPB9Q9BQS6 159 aa4.81□□□□□ -1.64
RTFDC1-209ENST00000487211 SLC5A7Q9GZV3 580 aa4.81□□□□□ -1.64
RTFDC1-209ENST00000487211 RANBP3Q9H6Z4 567 aaPredicted RBP4.81□□□□□ -1.64
RTFDC1-209ENST00000487211 SDF2L1Q9HCN8 221 aa4.81□□□□□ -1.64
RTFDC1-209ENST00000487211 SLC35D1Q9NTN3 355 aa4.81□□□□□ -1.64
RTFDC1-209ENST00000487211 MOB4Q9Y3A3 225 aa4.81□□□□□ -1.64
RTFDC1-209ENST00000487211 A0A1B0GUS0 222 aa4.8□□□□□ -1.64
RTFDC1-209ENST00000487211 PMS2P5A8MQ11 134 aa4.8□□□□□ -1.64
RTFDC1-209ENST00000487211 H7C2Y5 167 aa4.8□□□□□ -1.64
RTFDC1-209ENST00000487211 M0QZK8 103 aa4.8□□□□□ -1.64
RTFDC1-209ENST00000487211 FGF16O43320 207 aa4.8□□□□□ -1.64
RTFDC1-209ENST00000487211 PGLYRP1O75594 196 aaPredicted RBP4.8□□□□□ -1.64
RTFDC1-209ENST00000487211 SLC22A5O76082 557 aa4.8□□□□□ -1.64
RTFDC1-209ENST00000487211 NDUFA3O95167 84 aa4.8□□□□□ -1.64
RTFDC1-209ENST00000487211 IGLV2-23P01705 113 aa4.8□□□□□ -1.64
RTFDC1-209ENST00000487211 IGHG2P01859 326 aa4.8□□□□□ -1.64
RTFDC1-209ENST00000487211 APOHP02749 345 aaPredicted RBP4.8□□□□□ -1.64
RTFDC1-209ENST00000487211 CRYGBP07316 175 aa4.8□□□□□ -1.64
RTFDC1-209ENST00000487211 S100A5P33763 92 aa4.8□□□□□ -1.64
RTFDC1-209ENST00000487211 TAS2R46P59540 309 aa4.8□□□□□ -1.64
RTFDC1-209ENST00000487211 HERV-K104P61576 105 aa4.8□□□□□ -1.64
RTFDC1-209ENST00000487211 TSPAN5P62079 268 aa4.8□□□□□ -1.64
RTFDC1-209ENST00000487211 MRPS10P82664 201 aaKnown RBP4.8□□□□□ -1.64
RTFDC1-209ENST00000487211 SSBP1Q04837 148 aaKnown RBP4.8□□□□□ -1.64
RTFDC1-209ENST00000487211 PJVKQ0ZLH3 352 aa4.8□□□□□ -1.64
RTFDC1-209ENST00000487211 PSG5Q15238 335 aa4.8□□□□□ -1.64
RTFDC1-209ENST00000487211 MMDQ15546 238 aa4.8□□□□□ -1.64
RTFDC1-209ENST00000487211 C5orf64Q2M2E5 130 aa4.8□□□□□ -1.64
RTFDC1-209ENST00000487211 MRGPRG-AS1Q2M3A8 158 aa4.8□□□□□ -1.64
RTFDC1-209ENST00000487211 KIAA1644Q3SXP7 199 aa4.8□□□□□ -1.64
RTFDC1-209ENST00000487211 PYDC2Q56P42 97 aa4.8□□□□□ -1.64
RTFDC1-209ENST00000487211 LCE1AQ5T7P2 110 aa4.8□□□□□ -1.64
RTFDC1-209ENST00000487211 FAAP20Q6NZ36 180 aa4.8□□□□□ -1.64
RTFDC1-209ENST00000487211 STEAP1BQ6NZ63 245 aa4.8□□□□□ -1.64
RTFDC1-209ENST00000487211 C10orf99Q6UWK7 81 aa4.8□□□□□ -1.64
RTFDC1-209ENST00000487211 ZNF818PQ6ZRF7 136 aa4.8□□□□□ -1.64
RTFDC1-209ENST00000487211 LHFPL1Q86WI0 220 aa4.8□□□□□ -1.64
RTFDC1-209ENST00000487211 TMEM17Q86X19 198 aa4.8□□□□□ -1.64
RTFDC1-209ENST00000487211 KLHDC1Q8N7A1 406 aa4.8□□□□□ -1.64
RTFDC1-209ENST00000487211 C3orf56Q8N813 242 aa4.8□□□□□ -1.64
RTFDC1-209ENST00000487211 OR8H1Q8NGG4 311 aa4.8□□□□□ -1.64
RTFDC1-209ENST00000487211 OR4C13Q8NGP0 309 aa4.8□□□□□ -1.64
RTFDC1-209ENST00000487211 OR2T6Q8NHC8 308 aa4.8□□□□□ -1.64
RTFDC1-209ENST00000487211 MRGPRFQ96AM1 343 aa4.8□□□□□ -1.64
RTFDC1-209ENST00000487211 FLYWCH2Q96CP2 140 aaKnown RBP4.8□□□□□ -1.64
RTFDC1-209ENST00000487211 AKR1E2Q96JD6 320 aa4.8□□□□□ -1.64
RTFDC1-209ENST00000487211 NOL4LQ96MY1 436 aaPredicted RBP4.8□□□□□ -1.64
RTFDC1-209ENST00000487211 SDHCQ99643 169 aaPredicted RBP4.8□□□□□ -1.64
RTFDC1-209ENST00000487211 RNF5Q99942 180 aa4.8□□□□□ -1.64
RTFDC1-209ENST00000487211 FBXL15Q9H469 300 aa4.8□□□□□ -1.64
RTFDC1-209ENST00000487211 TAS2R8Q9NYW2 309 aa4.8□□□□□ -1.64
RTFDC1-209ENST00000487211 RABL2AQ9UBK7 228 aaPredicted RBP4.8□□□□□ -1.64
RTFDC1-209ENST00000487211 ZNF107Q9UII5 783 aaPredicted RBP4.8□□□□□ -1.64
RTFDC1-209ENST00000487211 LINC00527Q9UJ94 153 aa4.8□□□□□ -1.64
RTFDC1-209ENST00000487211 RABL2BQ9UNT1 228 aa4.8□□□□□ -1.64
RTFDC1-209ENST00000487211 WASHC3Q9Y3C0 194 aa4.8□□□□□ -1.64
RTFDC1-209ENST00000487211 PLXNB1O43157 2135 aa4.79□□□□□ -1.64
RTFDC1-209ENST00000487211 IGHV7-81A0A0B4J1V7 117 aa4.79□□□□□ -1.64
RTFDC1-209ENST00000487211 ANKRD20A5PA0PJZ0 165 aa4.79□□□□□ -1.64
RTFDC1-209ENST00000487211 KRTAP29-1A8MX34 341 aaPredicted RBP4.79□□□□□ -1.64
RTFDC1-209ENST00000487211 CCL24O00175 119 aa4.79□□□□□ -1.64
RTFDC1-209ENST00000487211 NBR2O15453 112 aa4.79□□□□□ -1.64
RTFDC1-209ENST00000487211 RAMP3O60896 148 aa4.79□□□□□ -1.64
RTFDC1-209ENST00000487211 DFFBO76075 338 aa4.79□□□□□ -1.64
RTFDC1-209ENST00000487211 RAB3DO95716 219 aa4.79□□□□□ -1.64
RTFDC1-209ENST00000487211 IFNA6P05013 189 aa4.79□□□□□ -1.64
RTFDC1-209ENST00000487211 PTBP1P26599 531 aaKnown RBP eCLIP4.79□□□□□ -1.64
RTFDC1-209ENST00000487211 CDX1P47902 265 aaPredicted RBP4.79□□□□□ -1.64
RTFDC1-209ENST00000487211 LGALS7P47929 136 aa4.79□□□□□ -1.64
RTFDC1-209ENST00000487211 TAS2R19P59542 299 aa4.79□□□□□ -1.64
RTFDC1-209ENST00000487211 MSMO1Q15800 293 aa4.79□□□□□ -1.64
RTFDC1-209ENST00000487211 RNASE10Q5GAN6 216 aaKnown RBP4.79□□□□□ -1.64
RTFDC1-209ENST00000487211 OR2B11Q5JQS5 317 aa4.79□□□□□ -1.64
RTFDC1-209ENST00000487211 BTNL8Q6UX41 500 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms