RNA–Protein interactions for RNA: ENST00000486960.5

SF1-217, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-217ENST00000486960 CCDC88CQ9P219 2028 aa4.38□□□□□ -1.71
SF1-217ENST00000486960 MPDZO75970 2070 aa4.37□□□□□ -1.71
SF1-217ENST00000486960 DNAH7Q8WXX0 4024 aa4.37□□□□□ -1.71
SF1-217ENST00000486960 ROS1P08922 2347 aa4.37□□□□□ -1.71
SF1-217ENST00000486960 A0A0B4J2A0 478 aa4.37□□□□□ -1.71
SF1-217ENST00000486960 FAM183AA6NL82 134 aa4.37□□□□□ -1.71
SF1-217ENST00000486960 RIIAD1A6NNX1 92 aa4.37□□□□□ -1.71
SF1-217ENST00000486960 C1orf196B1AJZ1 125 aa4.37□□□□□ -1.71
SF1-217ENST00000486960 E9PLD3 99 aa4.37□□□□□ -1.71
SF1-217ENST00000486960 K7EPK0 472 aa4.37□□□□□ -1.71
SF1-217ENST00000486960 SLC17A2O00624 439 aa4.37□□□□□ -1.71
SF1-217ENST00000486960 JTBO76095 146 aa4.37□□□□□ -1.71
SF1-217ENST00000486960 NDUFB8O95169 186 aa4.37□□□□□ -1.71
SF1-217ENST00000486960 SLC25A14O95258 325 aaPredicted RBP4.37□□□□□ -1.71
SF1-217ENST00000486960 NTN1O95631 604 aa4.37□□□□□ -1.71
SF1-217ENST00000486960 IGHMP01871 453 aa4.37□□□□□ -1.71
SF1-217ENST00000486960 FCGR3AP08637 254 aa4.37□□□□□ -1.71
SF1-217ENST00000486960 FGF6P10767 208 aa4.37□□□□□ -1.71
SF1-217ENST00000486960 CD1DP15813 335 aa4.37□□□□□ -1.71
SF1-217ENST00000486960 S100A2P29034 98 aa4.37□□□□□ -1.71
SF1-217ENST00000486960 DAD1P61803 113 aa4.37□□□□□ -1.71
SF1-217ENST00000486960 SNRPD2P62316 118 aaKnown RBP4.37□□□□□ -1.71
SF1-217ENST00000486960 TMEM267Q0VDI3 215 aaPredicted RBP4.37□□□□□ -1.71
SF1-217ENST00000486960 ARFRP1Q13795 201 aa4.37□□□□□ -1.71
SF1-217ENST00000486960 GUCA2BQ16661 112 aa4.37□□□□□ -1.71
SF1-217ENST00000486960 GSG1Q2KHT4 349 aa4.37□□□□□ -1.71
SF1-217ENST00000486960 NHLRC3Q5JS37 347 aa4.37□□□□□ -1.71
SF1-217ENST00000486960 ZNF506Q5JVG8 444 aa4.37□□□□□ -1.71
SF1-217ENST00000486960 Q6ZSV7 163 aa4.37□□□□□ -1.71
SF1-217ENST00000486960 FAM71E2Q8N5Q1 922 aa4.37□□□□□ -1.71
SF1-217ENST00000486960 SYT8Q8NBV8 401 aa4.37□□□□□ -1.71
SF1-217ENST00000486960 FDCSPQ8NFU4 85 aa4.37□□□□□ -1.71
SF1-217ENST00000486960 OR2T4Q8NH00 348 aa4.37□□□□□ -1.71
SF1-217ENST00000486960 ZNF420Q8TAQ5 688 aaPredicted RBP4.37□□□□□ -1.71
SF1-217ENST00000486960 PHYHIPLQ96FC7 376 aa4.37□□□□□ -1.71
SF1-217ENST00000486960 RITA1Q96K30 269 aa4.37□□□□□ -1.71
SF1-217ENST00000486960 C2orf48Q96LS8 159 aa4.37□□□□□ -1.71
SF1-217ENST00000486960 NRTNQ99748 197 aa4.37□□□□□ -1.71
SF1-217ENST00000486960 GNB1LQ9BYB4 327 aa4.37□□□□□ -1.71
SF1-217ENST00000486960 SAMD10Q9BYL1 202 aa4.37□□□□□ -1.71
SF1-217ENST00000486960 OR8D2Q9GZM6 311 aa4.37□□□□□ -1.71
SF1-217ENST00000486960 RBM38Q9H0Z9 239 aaKnown RBP4.37□□□□□ -1.71
SF1-217ENST00000486960 TCEAL2Q9H3H9 227 aaPredicted RBP4.37□□□□□ -1.71
SF1-217ENST00000486960 TMEM100Q9NV29 134 aa4.37□□□□□ -1.71
SF1-217ENST00000486960 CALYQ9NYX4 217 aa4.37□□□□□ -1.71
SF1-217ENST00000486960 LAMTOR3Q9UHA4 124 aa4.37□□□□□ -1.71
SF1-217ENST00000486960 SHPKQ9UHJ6 478 aa4.37□□□□□ -1.71
SF1-217ENST00000486960 WASHC3Q9Y3C0 194 aa4.37□□□□□ -1.71
SF1-217ENST00000486960 IGHV1OR21-1A0A087WYE8 117 aa4.36□□□□□ -1.71
SF1-217ENST00000486960 IGLV9-49A0A0B4J1Y8 123 aa4.36□□□□□ -1.71
SF1-217ENST00000486960 PNMA8CA0A1B0GUJ8 204 aa4.36□□□□□ -1.71
SF1-217ENST00000486960 OR4C45A6NMZ5 311 aa4.36□□□□□ -1.71
SF1-217ENST00000486960 SHISA9B4DS77 424 aa4.36□□□□□ -1.71
SF1-217ENST00000486960 ZNF587BE7ETH6 402 aa4.36□□□□□ -1.71
SF1-217ENST00000486960 SAP18O00422 153 aaKnown RBP4.36□□□□□ -1.71
SF1-217ENST00000486960 XKRYO14609 159 aa4.36□□□□□ -1.71
SF1-217ENST00000486960 MYL12BO14950 172 aa4.36□□□□□ -1.71
SF1-217ENST00000486960 PDCD6O75340 191 aa4.36□□□□□ -1.71
SF1-217ENST00000486960 EIF4EP06730 217 aaKnown RBP4.36□□□□□ -1.71
SF1-217ENST00000486960 PRTN3P24158 256 aa4.36□□□□□ -1.71
SF1-217ENST00000486960 FCGR2CP31995 323 aa4.36□□□□□ -1.71
SF1-217ENST00000486960 HLA-DRB3P79483 266 aa4.36□□□□□ -1.71
SF1-217ENST00000486960 IFITM3Q01628 133 aa4.36□□□□□ -1.71
SF1-217ENST00000486960 FZD2Q14332 565 aa4.36□□□□□ -1.71
SF1-217ENST00000486960 ZNF181Q2M3W8 571 aa4.36□□□□□ -1.71
SF1-217ENST00000486960 DEFB113Q30KQ7 82 aa4.36□□□□□ -1.71
SF1-217ENST00000486960 CCSMST1Q4G0I0 132 aa4.36□□□□□ -1.71
SF1-217ENST00000486960 PRSS54Q6PEW0 395 aa4.36□□□□□ -1.71
SF1-217ENST00000486960 RASL11AQ6T310 242 aa4.36□□□□□ -1.71
SF1-217ENST00000486960 ZCCHC23Q6ZST2 131 aa4.36□□□□□ -1.71
SF1-217ENST00000486960 GTF2H5Q6ZYL4 71 aa4.36□□□□□ -1.71
SF1-217ENST00000486960 RPS27LQ71UM5 84 aaKnown RBP4.36□□□□□ -1.71
SF1-217ENST00000486960 MOB1BQ7L9L4 216 aa4.36□□□□□ -1.71
SF1-217ENST00000486960 TMEM179BQ7Z7N9 219 aa4.36□□□□□ -1.71
SF1-217ENST00000486960 MRGPREQ86SM8 312 aa4.36□□□□□ -1.71
SF1-217ENST00000486960 ODF3L1Q8IXM7 274 aa4.36□□□□□ -1.71
SF1-217ENST00000486960 ANKRD29Q8N6D5 301 aa4.36□□□□□ -1.71
SF1-217ENST00000486960 ZNF433Q8N7K0 673 aaPredicted RBP4.36□□□□□ -1.71
SF1-217ENST00000486960 SAMD12Q8N8I0 201 aa4.36□□□□□ -1.71
SF1-217ENST00000486960 OR5K1Q8NHB7 308 aa4.36□□□□□ -1.71
SF1-217ENST00000486960 CCL4L1Q8NHW4 92 aa4.36□□□□□ -1.71
SF1-217ENST00000486960 STARD4Q96DR4 205 aa4.36□□□□□ -1.71
SF1-217ENST00000486960 SLAMF6Q96DU3 332 aa4.36□□□□□ -1.71
SF1-217ENST00000486960 ADAT3Q96EY9 351 aaPredicted RBP4.36□□□□□ -1.71
SF1-217ENST00000486960 FAM19A4Q96LR4 140 aa4.36□□□□□ -1.71
SF1-217ENST00000486960 C9orf85Q96MD7 179 aa4.36□□□□□ -1.71
SF1-217ENST00000486960 ZNF184Q99676 751 aaPredicted RBP4.36□□□□□ -1.71
SF1-217ENST00000486960 C1QTNF4Q9BXJ3 329 aa4.36□□□□□ -1.71
SF1-217ENST00000486960 GNB4Q9HAV0 340 aa4.36□□□□□ -1.71
SF1-217ENST00000486960 FGF22Q9HCT0 170 aa4.36□□□□□ -1.71
SF1-217ENST00000486960 VSIG4Q9Y279 399 aa4.36□□□□□ -1.71
SF1-217ENST00000486960 CSAG2Q9Y5P2 127 aa4.36□□□□□ -1.71
SF1-217ENST00000486960 IGKV1D-8A0A087WSZ0 117 aa4.35□□□□□ -1.71
SF1-217ENST00000486960 TRAV5A0A0B4J249 113 aa4.35□□□□□ -1.71
SF1-217ENST00000486960 TRAV8-6A0A0B4J262 113 aa4.35□□□□□ -1.71
SF1-217ENST00000486960 A0A0G2JN53 185 aa4.35□□□□□ -1.71
SF1-217ENST00000486960 KNCNA6PVL3 124 aa4.35□□□□□ -1.71
SF1-217ENST00000486960 ZNF705EA8MWA4 302 aaPredicted RBP4.35□□□□□ -1.71
SF1-217ENST00000486960 UBFD1O14562 309 aaKnown RBP4.35□□□□□ -1.71
SF1-217ENST00000486960 EPPINO95925 133 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms