RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 COX6A1P12074 109 aa8.76□□□□□ -1.01
CCDC171-208ENST00000486641 PRR20EP86478 221 aa8.76□□□□□ -1.01
CCDC171-208ENST00000486641 PRR20CP86479 221 aa8.76□□□□□ -1.01
CCDC171-208ENST00000486641 PRR20DP86480 221 aa8.76□□□□□ -1.01
CCDC171-208ENST00000486641 PRR20BP86481 221 aa8.76□□□□□ -1.01
CCDC171-208ENST00000486641 PRR20AP86496 221 aa8.76□□□□□ -1.01
CCDC171-208ENST00000486641 HOXA4Q00056 320 aaPredicted RBP8.76□□□□□ -1.01
CCDC171-208ENST00000486641 Q8IYB0 196 aa8.76□□□□□ -1.01
CCDC171-208ENST00000486641 OR52E5Q8NH55 327 aa8.76□□□□□ -1.01
CCDC171-208ENST00000486641 RFESDQ8TAC1 157 aa8.76□□□□□ -1.01
CCDC171-208ENST00000486641 FAM216AQ8WUB2 273 aa8.76□□□□□ -1.01
CCDC171-208ENST00000486641 LINC00479Q96M42 142 aa8.76□□□□□ -1.01
CCDC171-208ENST00000486641 ZNF355PQ9NSJ1 428 aa8.76□□□□□ -1.01
CCDC171-208ENST00000486641 SLC25A10Q9UBX3 287 aaPredicted RBP8.76□□□□□ -1.01
CCDC171-208ENST00000486641 PTPRBP23467 1997 aa8.76□□□□□ -1.01
CCDC171-208ENST00000486641 SYS1-DBNDD2H3BUS1 97 aa8.76□□□□□ -1.01
CCDC171-208ENST00000486641 PROP1O75360 226 aa8.76□□□□□ -1.01
CCDC171-208ENST00000486641 TFF1P04155 84 aa8.76□□□□□ -1.01
CCDC171-208ENST00000486641 SP1P08047 785 aa8.76□□□□□ -1.01
CCDC171-208ENST00000486641 ARR3P36575 388 aa8.76□□□□□ -1.01
CCDC171-208ENST00000486641 TUSC5Q8IXB3 177 aa8.76□□□□□ -1.01
CCDC171-208ENST00000486641 MBD6Q96DN6 1003 aa8.76□□□□□ -1.01
CCDC171-208ENST00000486641 TRIB1Q96RU8 372 aa8.76□□□□□ -1.01
CCDC171-208ENST00000486641 RTL8AQ9BWD3 113 aa8.76□□□□□ -1.01
CCDC171-208ENST00000486641 ZNF430Q9H8G1 570 aaPredicted RBP8.76□□□□□ -1.01
CCDC171-208ENST00000486641 SCRT2Q9NQ03 307 aa8.76□□□□□ -1.01
CCDC171-208ENST00000486641 ZNF835Q9Y2P0 537 aa8.76□□□□□ -1.01
CCDC171-208ENST00000486641 MT-CO3P00414 261 aa8.75□□□□□ -1.01
CCDC171-208ENST00000486641 DUTP33316 252 aaKnown RBP8.75□□□□□ -1.01
CCDC171-208ENST00000486641 CAMPP49913 170 aa8.75□□□□□ -1.01
CCDC171-208ENST00000486641 FOXE3Q13461 319 aa8.75□□□□□ -1.01
CCDC171-208ENST00000486641 OR1C1Q15619 314 aa8.75□□□□□ -1.01
CCDC171-208ENST00000486641 SLC35E4Q6ICL7 350 aa8.75□□□□□ -1.01
CCDC171-208ENST00000486641 Q6ZR03 302 aa8.75□□□□□ -1.01
CCDC171-208ENST00000486641 TPRX1Q8N7U7 411 aa8.75□□□□□ -1.01
CCDC171-208ENST00000486641 FER1L6-AS1Q8NA97 138 aa8.75□□□□□ -1.01
CCDC171-208ENST00000486641 NABP2Q9BQ15 211 aa8.75□□□□□ -1.01
CCDC171-208ENST00000486641 LINC00470Q9BZP3 86 aa8.75□□□□□ -1.01
CCDC171-208ENST00000486641 FAM234AQ9H0X4 552 aa8.75□□□□□ -1.01
CCDC171-208ENST00000486641 FSCN3Q9NQT6 498 aa8.75□□□□□ -1.01
CCDC171-208ENST00000486641 PEF1Q9UBV8 284 aaKnown RBP8.75□□□□□ -1.01
CCDC171-208ENST00000486641 OR7C2O60412 319 aa8.75□□□□□ -1.01
CCDC171-208ENST00000486641 OR2J3O76001 311 aa8.75□□□□□ -1.01
CCDC171-208ENST00000486641 PLP2Q04941 152 aa8.75□□□□□ -1.01
CCDC171-208ENST00000486641 SRYQ05066 204 aa8.75□□□□□ -1.01
CCDC171-208ENST00000486641 RAB31Q13636 194 aa8.75□□□□□ -1.01
CCDC171-208ENST00000486641 C1orf185Q5T7R7 199 aa8.75□□□□□ -1.01
CCDC171-208ENST00000486641 LHFPL4Q7Z7J7 247 aa8.75□□□□□ -1.01
CCDC171-208ENST00000486641 SLC25A40Q8TBP6 338 aa8.75□□□□□ -1.01
CCDC171-208ENST00000486641 PLPPR2Q96GM1 343 aa8.75□□□□□ -1.01
CCDC171-208ENST00000486641 COQ2Q96H96 371 aa8.75□□□□□ -1.01
CCDC171-208ENST00000486641 MCRIP2Q9BUT9 160 aaKnown RBP8.75□□□□□ -1.01
CCDC171-208ENST00000486641 PLEKHA3Q9HB20 300 aa8.75□□□□□ -1.01
CCDC171-208ENST00000486641 OCIAD1Q9NX40 245 aa8.75□□□□□ -1.01
CCDC171-208ENST00000486641 C1RLQ9NZP8 487 aa8.75□□□□□ -1.01
CCDC171-208ENST00000486641 POLDIP2Q9Y2S7 368 aa8.75□□□□□ -1.01
CCDC171-208ENST00000486641 FRYLO94915 3013 aa8.74□□□□□ -1.01
CCDC171-208ENST00000486641 IGHV5-10-1A0A0J9YXX1 117 aa8.74□□□□□ -1.01
CCDC171-208ENST00000486641 A0A1W2PQM1 296 aa8.74□□□□□ -1.01
CCDC171-208ENST00000486641 FAM90A9PA6NNJ1 464 aa8.74□□□□□ -1.01
CCDC171-208ENST00000486641 G3V4G9 280 aa8.74□□□□□ -1.01
CCDC171-208ENST00000486641 GRPP07492 148 aa8.74□□□□□ -1.01
CCDC171-208ENST00000486641 REG1BP48304 166 aa8.74□□□□□ -1.01
CCDC171-208ENST00000486641 LTC4SQ16873 150 aa8.74□□□□□ -1.01
CCDC171-208ENST00000486641 VWA1Q6PCB0 445 aa8.74□□□□□ -1.01
CCDC171-208ENST00000486641 SNRNP40Q96DI7 357 aaKnown RBP8.74□□□□□ -1.01
CCDC171-208ENST00000486641 TCF19Q9Y242 345 aa8.74□□□□□ -1.01
CCDC171-208ENST00000486641 SELENOKQ9Y6D0 94 aa8.74□□□□□ -1.01
CCDC171-208ENST00000486641 IGHV1-24A0A0C4DH33 117 aa8.74□□□□□ -1.01
CCDC171-208ENST00000486641 GAGE10A6NGK3 116 aa8.74□□□□□ -1.01
CCDC171-208ENST00000486641 VWC2LB2RUY7 222 aa8.74□□□□□ -1.01
CCDC171-208ENST00000486641 WNT9BO14905 357 aa8.74□□□□□ -1.01
CCDC171-208ENST00000486641 CD24P25063 80 aa8.74□□□□□ -1.01
CCDC171-208ENST00000486641 PAX2Q02962 417 aa8.74□□□□□ -1.01
CCDC171-208ENST00000486641 OR1B1Q8NGR6 318 aa8.74□□□□□ -1.01
CCDC171-208ENST00000486641 GRAMD2BQ96HH9 432 aa8.74□□□□□ -1.01
CCDC171-208ENST00000486641 OR2V2Q96R30 315 aa8.74□□□□□ -1.01
CCDC171-208ENST00000486641 FREM2Q5SZK8 3169 aa8.73□□□□□ -1.01
CCDC171-208ENST00000486641 IGKV3D-15A0A087WSY6 115 aa8.73□□□□□ -1.01
CCDC171-208ENST00000486641 C7orf71A4D174 169 aa8.73□□□□□ -1.01
CCDC171-208ENST00000486641 FAM231BA6NCW3 169 aa8.73□□□□□ -1.01
CCDC171-208ENST00000486641 HIST1H1AQ02539 215 aaPredicted RBP8.73□□□□□ -1.01
CCDC171-208ENST00000486641 GABRA6Q16445 453 aa8.73□□□□□ -1.01
CCDC171-208ENST00000486641 SMIM21Q3B7S5 101 aa8.73□□□□□ -1.01
CCDC171-208ENST00000486641 ALKBH6Q3KRA9 238 aa8.73□□□□□ -1.01
CCDC171-208ENST00000486641 GUSBP11Q6P575 273 aa8.73□□□□□ -1.01
CCDC171-208ENST00000486641 OR13A1Q8NGR1 328 aa8.73□□□□□ -1.01
CCDC171-208ENST00000486641 CHRDL1Q9BU40 450 aa8.73□□□□□ -1.01
CCDC171-208ENST00000486641 FNDC4Q9H6D8 234 aaPredicted RBP8.73□□□□□ -1.01
CCDC171-208ENST00000486641 WDR54Q9H977 334 aa8.73□□□□□ -1.01
CCDC171-208ENST00000486641 HIGD1CA8MV81 97 aa8.72□□□□□ -1.01
CCDC171-208ENST00000486641 LEPROTL1O95214 131 aa8.72□□□□□ -1.01
CCDC171-208ENST00000486641 GDF1P27539 372 aa8.72□□□□□ -1.01
CCDC171-208ENST00000486641 GPR183P32249 361 aa8.72□□□□□ -1.01
CCDC171-208ENST00000486641 FOXA3P55318 350 aaPredicted RBP8.72□□□□□ -1.01
CCDC171-208ENST00000486641 ZNF766Q5HY98 468 aa8.72□□□□□ -1.01
CCDC171-208ENST00000486641 UFSP1Q6NVU6 142 aa8.72□□□□□ -1.01
CCDC171-208ENST00000486641 TRAT1Q6PIZ9 186 aa8.72□□□□□ -1.01
CCDC171-208ENST00000486641 DCTN5Q9BTE1 182 aa8.72□□□□□ -1.01
CCDC171-208ENST00000486641 TMEM191AQ9H0A3 160 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms