RNA–Protein interactions for RNA: ENST00000486502.1

TNFSF13B-204, Transcript of TNF superfamily member 13b, humanhuman

TSL 5

Gene TNFSF13B, Length 395 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13B-204ENST00000486502 TMEM56Q96MV1 263 aa11.75□□□□□ -0.53
TNFSF13B-204ENST00000486502 YTHDF1Q9BYJ9 559 aaKnown RBP11.75□□□□□ -0.53
TNFSF13B-204ENST00000486502 FKBP11Q9NYL4 201 aa11.75□□□□□ -0.53
TNFSF13B-204ENST00000486502 F11RQ9Y624 299 aaKnown RBP11.75□□□□□ -0.53
TNFSF13B-204ENST00000486502 IGKV3-7A0A075B6H7 116 aa11.74□□□□□ -0.53
TNFSF13B-204ENST00000486502 IGHV3-49A0A0A0MS15 119 aa11.74□□□□□ -0.53
TNFSF13B-204ENST00000486502 MFAP2P55001 183 aa11.74□□□□□ -0.53
TNFSF13B-204ENST00000486502 CMC4P56277 68 aaPredicted RBP11.74□□□□□ -0.53
TNFSF13B-204ENST00000486502 ODF3L2Q3SX64 289 aa11.74□□□□□ -0.53
TNFSF13B-204ENST00000486502 OR5H2Q8NGV7 314 aa11.74□□□□□ -0.53
TNFSF13B-204ENST00000486502 FCAMRQ8WWV6 532 aa11.74□□□□□ -0.53
TNFSF13B-204ENST00000486502 CMTM3Q96MX0 182 aa11.74□□□□□ -0.53
TNFSF13B-204ENST00000486502 MAP6D1Q9H9H5 199 aa11.74□□□□□ -0.53
TNFSF13B-204ENST00000486502 SMPXQ9UHP9 88 aa11.74□□□□□ -0.53
TNFSF13B-204ENST00000486502 NUPL2O15504 423 aaKnown RBP11.73□□□□□ -0.53
TNFSF13B-204ENST00000486502 XRCC3O43542 346 aa11.73□□□□□ -0.53
TNFSF13B-204ENST00000486502 FGF2P09038 288 aa11.73□□□□□ -0.53
TNFSF13B-204ENST00000486502 KMT2AQ03164 3969 aa11.73□□□□□ -0.53
TNFSF13B-204ENST00000486502 FRAS1Q86XX4 4008 aa11.73□□□□□ -0.53
TNFSF13B-204ENST00000486502 TMEM116Q8NCL8 245 aa11.73□□□□□ -0.53
TNFSF13B-204ENST00000486502 OR6F1Q8NGZ6 308 aa11.73□□□□□ -0.53
TNFSF13B-204ENST00000486502 PHLDA1Q8WV24 401 aaPredicted RBP11.73□□□□□ -0.53
TNFSF13B-204ENST00000486502 SLC25A46Q96AG3 418 aa11.73□□□□□ -0.53
TNFSF13B-204ENST00000486502 MISP3Q96FF7 219 aa11.73□□□□□ -0.53
TNFSF13B-204ENST00000486502 RNF2Q99496 336 aa11.73□□□□□ -0.53
TNFSF13B-204ENST00000486502 RHPN1-AS1Q9BWJ2 59 aa11.73□□□□□ -0.53
TNFSF13B-204ENST00000486502 CSTL1Q9H114 145 aa11.73□□□□□ -0.53
TNFSF13B-204ENST00000486502 PRNDQ9UKY0 176 aa11.73□□□□□ -0.53
TNFSF13B-204ENST00000486502 C15orf62A8K5M9 175 aa11.72□□□□□ -0.53
TNFSF13B-204ENST00000486502 MPTX1A8MV57 137 aa11.72□□□□□ -0.53
TNFSF13B-204ENST00000486502 CTSGP08311 255 aa11.72□□□□□ -0.53
TNFSF13B-204ENST00000486502 S100GP29377 79 aa11.72□□□□□ -0.53
TNFSF13B-204ENST00000486502 FCGR2BP31994 310 aaPredicted RBP11.72□□□□□ -0.53
TNFSF13B-204ENST00000486502 ADMP35318 185 aa11.72□□□□□ -0.53
TNFSF13B-204ENST00000486502 MFAP4P55083 255 aa11.72□□□□□ -0.53
TNFSF13B-204ENST00000486502 RELQ04864 619 aaPredicted RBP11.72□□□□□ -0.53
TNFSF13B-204ENST00000486502 NEDD8Q15843 81 aa11.72□□□□□ -0.53
TNFSF13B-204ENST00000486502 GBGT1Q8N5D6 347 aa11.72□□□□□ -0.53
TNFSF13B-204ENST00000486502 OR4A16Q8NH70 328 aa11.72□□□□□ -0.53
TNFSF13B-204ENST00000486502 MOB3AQ96BX8 217 aa11.72□□□□□ -0.53
TNFSF13B-204ENST00000486502 ATP6V0BQ99437 205 aa11.72□□□□□ -0.53
TNFSF13B-204ENST00000486502 RARRES2Q99969 163 aa11.72□□□□□ -0.53
TNFSF13B-204ENST00000486502 IGHV3OR16-13A0A075B7E8 117 aa11.71□□□□□ -0.53
TNFSF13B-204ENST00000486502 TRAV14DV4A0A0A6YYC5 116 aa11.71□□□□□ -0.53
TNFSF13B-204ENST00000486502 IGHV3-74A0A0B4J1X5 117 aa11.71□□□□□ -0.53
TNFSF13B-204ENST00000486502 IGHV7-4-1A0A0J9YVY3 117 aa11.71□□□□□ -0.53
TNFSF13B-204ENST00000486502 K7EIM0 57 aa11.71□□□□□ -0.53
TNFSF13B-204ENST00000486502 GPR31O00270 319 aa11.71□□□□□ -0.53
TNFSF13B-204ENST00000486502 CHEK1O14757 476 aa11.71□□□□□ -0.53
TNFSF13B-204ENST00000486502 IFNA4P05014 189 aa11.71□□□□□ -0.53
TNFSF13B-204ENST00000486502 TAS2R46P59540 309 aa11.71□□□□□ -0.53
TNFSF13B-204ENST00000486502 TSPAN5P62079 268 aa11.71□□□□□ -0.53
TNFSF13B-204ENST00000486502 PAFAH1B2P68402 229 aa11.71□□□□□ -0.53
TNFSF13B-204ENST00000486502 ZNF124Q15973 351 aa11.71□□□□□ -0.53
TNFSF13B-204ENST00000486502 PHLDA2Q53GA4 152 aa11.71□□□□□ -0.53
TNFSF13B-204ENST00000486502 TMEM69Q5SWH9 247 aa11.71□□□□□ -0.53
TNFSF13B-204ENST00000486502 RPP25LQ8N5L8 163 aaKnown RBP11.71□□□□□ -0.53
TNFSF13B-204ENST00000486502 TSC22D3Q99576 134 aa11.71□□□□□ -0.53
TNFSF13B-204ENST00000486502 FBXL17Q9UF56 701 aa11.71□□□□□ -0.53
TNFSF13B-204ENST00000486502 IGHV3-48P01763 117 aa11.7□□□□□ -0.54
TNFSF13B-204ENST00000486502 ATF4P18848 351 aaPredicted RBP11.7□□□□□ -0.54
TNFSF13B-204ENST00000486502 HLA-DMAP28067 261 aa11.7□□□□□ -0.54
TNFSF13B-204ENST00000486502 PRSS3P35030 304 aa11.7□□□□□ -0.54
TNFSF13B-204ENST00000486502 RPL11P62913 178 aaKnown RBP11.7□□□□□ -0.54
TNFSF13B-204ENST00000486502 H2BFWTQ7Z2G1 175 aa11.7□□□□□ -0.54
TNFSF13B-204ENST00000486502 CROCCP3Q8IVE0 287 aa11.7□□□□□ -0.54
TNFSF13B-204ENST00000486502 SAMD12Q8N8I0 201 aa11.7□□□□□ -0.54
TNFSF13B-204ENST00000486502 OR1P1Q8NH06 330 aa11.7□□□□□ -0.54
TNFSF13B-204ENST00000486502 PINX1Q96BK5 328 aaKnown RBP11.7□□□□□ -0.54
TNFSF13B-204ENST00000486502 DNAH10Q8IVF4 4471 aa11.69□□□□□ -0.54
TNFSF13B-204ENST00000486502 F8W735 103 aaPredicted RBP11.69□□□□□ -0.54
TNFSF13B-204ENST00000486502 DNASE2O00115 360 aaPredicted RBP11.69□□□□□ -0.54
TNFSF13B-204ENST00000486502 TMEM127O75204 238 aa11.69□□□□□ -0.54
TNFSF13B-204ENST00000486502 EIF4EP06730 217 aaKnown RBP11.69□□□□□ -0.54
TNFSF13B-204ENST00000486502 TAS2R20P59543 309 aa11.69□□□□□ -0.54
TNFSF13B-204ENST00000486502 UBE2NLQ5JXB2 153 aa11.69□□□□□ -0.54
TNFSF13B-204ENST00000486502 LPCAT3Q6P1A2 487 aa11.69□□□□□ -0.54
TNFSF13B-204ENST00000486502 OR11H2Q8NH07 326 aa11.69□□□□□ -0.54
TNFSF13B-204ENST00000486502 C11orf45Q8TAV5 145 aa11.69□□□□□ -0.54
TNFSF13B-204ENST00000486502 TXN2Q99757 166 aa11.69□□□□□ -0.54
TNFSF13B-204ENST00000486502 DBX1A6NMT0 343 aa11.68□□□□□ -0.54
TNFSF13B-204ENST00000486502 GNG7O60262 68 aa11.68□□□□□ -0.54
TNFSF13B-204ENST00000486502 DEDDO75618 318 aa11.68□□□□□ -0.54
TNFSF13B-204ENST00000486502 ATP6V1G2O95670 118 aa11.68□□□□□ -0.54
TNFSF13B-204ENST00000486502 MT-CO2P00403 227 aa11.68□□□□□ -0.54
TNFSF13B-204ENST00000486502 NANOS2P60321 138 aaKnown RBP11.68□□□□□ -0.54
TNFSF13B-204ENST00000486502 ERHP84090 104 aaKnown RBP11.68□□□□□ -0.54
TNFSF13B-204ENST00000486502 LYSMD2Q8IV50 215 aa11.68□□□□□ -0.54
TNFSF13B-204ENST00000486502 GATAD1Q8WUU5 269 aa11.68□□□□□ -0.54
TNFSF13B-204ENST00000486502 TMEM14BQ9NUH8 114 aa11.68□□□□□ -0.54
TNFSF13B-204ENST00000486502 SMIM31A0A1B0GVY4 71 aa11.67□□□□□ -0.54
TNFSF13B-204ENST00000486502 C15orf61A6NNL5 157 aa11.67□□□□□ -0.54
TNFSF13B-204ENST00000486502 HRH1P35367 487 aa11.67□□□□□ -0.54
TNFSF13B-204ENST00000486502 RPS19P39019 145 aaKnown RBP11.67□□□□□ -0.54
TNFSF13B-204ENST00000486502 LSM3P62310 102 aaKnown RBP11.67□□□□□ -0.54
TNFSF13B-204ENST00000486502 RBMS2Q15434 407 aaKnown RBP11.67□□□□□ -0.54
TNFSF13B-204ENST00000486502 TCF24Q7RTU0 167 aa11.67□□□□□ -0.54
TNFSF13B-204ENST00000486502 TBC1D26Q86UD7 250 aa11.67□□□□□ -0.54
TNFSF13B-204ENST00000486502 CADM3Q8N126 398 aa11.67□□□□□ -0.54
TNFSF13B-204ENST00000486502 GINS3Q9BRX5 216 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms