RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 SLC35B4Q969S0 331 aa0.87□□□□□ -2.27
LTN1-206ENST00000486427 WDR61Q9GZS3 305 aaKnown RBP0.87□□□□□ -2.27
LTN1-206ENST00000486427 MYOFQ9NZM1 2061 aa0.87□□□□□ -2.27
LTN1-206ENST00000486427 HEATR5BQ9P2D3 2071 aa0.87□□□□□ -2.27
LTN1-206ENST00000486427 COL4A5P29400 1685 aa0.86□□□□□ -2.27
LTN1-206ENST00000486427 IGKV1-5P01602 117 aa0.86□□□□□ -2.27
LTN1-206ENST00000486427 ZNF846Q147U1 533 aa0.86□□□□□ -2.27
LTN1-206ENST00000486427 AADACL3Q5VUY0 350 aa0.86□□□□□ -2.27
LTN1-206ENST00000486427 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.86□□□□□ -2.27
LTN1-206ENST00000486427 OR51D1Q8NGF3 324 aa0.86□□□□□ -2.27
LTN1-206ENST00000486427 MRPL30Q8TCC3 161 aaKnown RBP0.86□□□□□ -2.27
LTN1-206ENST00000486427 RASSF5Q8WWW0 418 aa0.86□□□□□ -2.27
LTN1-206ENST00000486427 KLK6Q92876 244 aa0.86□□□□□ -2.27
LTN1-206ENST00000486427 DERL1Q9BUN8 251 aa0.86□□□□□ -2.27
LTN1-206ENST00000486427 REG4Q9BYZ8 158 aa0.86□□□□□ -2.27
LTN1-206ENST00000486427 HEATR5AQ86XA9 2040 aa0.86□□□□□ -2.27
LTN1-206ENST00000486427 INTS1Q8N201 2190 aaKnown RBP0.86□□□□□ -2.27
LTN1-206ENST00000486427 SNAPC4Q5SXM2 1469 aa0.86□□□□□ -2.27
LTN1-206ENST00000486427 TMEM212A6NML5 194 aa0.85□□□□□ -2.27
LTN1-206ENST00000486427 EEF1E1-BLOC1S5C9J1V9 151 aa0.85□□□□□ -2.27
LTN1-206ENST00000486427 UBBP0CG47 229 aa0.85□□□□□ -2.27
LTN1-206ENST00000486427 PRB4P10163 310 aaPredicted RBP0.85□□□□□ -2.27
LTN1-206ENST00000486427 EIF2B2P49770 351 aaKnown RBP0.85□□□□□ -2.27
LTN1-206ENST00000486427 RUNX1Q01196 453 aa0.85□□□□□ -2.27
LTN1-206ENST00000486427 OR2F1Q13607 317 aa0.85□□□□□ -2.27
LTN1-206ENST00000486427 HIST3H3Q16695 136 aa0.85□□□□□ -2.27
LTN1-206ENST00000486427 LRRC25Q8N386 305 aaPredicted RBP0.85□□□□□ -2.27
LTN1-206ENST00000486427 ZNF565Q8N9K5 539 aa0.85□□□□□ -2.27
LTN1-206ENST00000486427 PFN4Q8NHR9 129 aa0.85□□□□□ -2.27
LTN1-206ENST00000486427 DDI1Q8WTU0 396 aa0.85□□□□□ -2.27
LTN1-206ENST00000486427 TP73-AS1Q9UF72 201 aa0.85□□□□□ -2.27
LTN1-206ENST00000486427 LSM5Q9Y4Y9 91 aaKnown RBP0.85□□□□□ -2.27
LTN1-206ENST00000486427 TTC21AQ8NDW8 1320 aa0.85□□□□□ -2.27
LTN1-206ENST00000486427 FBN2P35556 2912 aa0.85□□□□□ -2.27
LTN1-206ENST00000486427 SHBGP04278 402 aa0.84□□□□□ -2.27
LTN1-206ENST00000486427 CALB1P05937 261 aa0.84□□□□□ -2.27
LTN1-206ENST00000486427 HIST1H2BOP23527 126 aa0.84□□□□□ -2.27
LTN1-206ENST00000486427 HIST1H2BBP33778 126 aa0.84□□□□□ -2.27
LTN1-206ENST00000486427 HIST1H2BDP58876 126 aa0.84□□□□□ -2.27
LTN1-206ENST00000486427 HIST1H2BCP62807 126 aa0.84□□□□□ -2.27
LTN1-206ENST00000486427 IFITM2Q01629 132 aa0.84□□□□□ -2.27
LTN1-206ENST00000486427 STX5Q13190 355 aa0.84□□□□□ -2.27
LTN1-206ENST00000486427 HIST2H2BEQ16778 126 aa0.84□□□□□ -2.27
LTN1-206ENST00000486427 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.84□□□□□ -2.27
LTN1-206ENST00000486427 ZNF826PQ6ZT77 177 aa0.84□□□□□ -2.27
LTN1-206ENST00000486427 HIST1H2BHQ93079 126 aa0.84□□□□□ -2.27
LTN1-206ENST00000486427 HIST1H2BNQ99877 126 aa0.84□□□□□ -2.27
LTN1-206ENST00000486427 HIST1H2BMQ99879 126 aa0.84□□□□□ -2.27
LTN1-206ENST00000486427 CMTM6Q9NX76 183 aa0.84□□□□□ -2.27
LTN1-206ENST00000486427 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP0.83□□□□□ -2.28
LTN1-206ENST00000486427 KCNK1O00180 336 aa0.83□□□□□ -2.28
LTN1-206ENST00000486427 IFNA5P01569 189 aa0.83□□□□□ -2.28
LTN1-206ENST00000486427 HIST1H1EP10412 219 aaKnown RBP0.83□□□□□ -2.28
LTN1-206ENST00000486427 NKX2-5P52952 324 aaPredicted RBP0.83□□□□□ -2.28
LTN1-206ENST00000486427 RPL22L1Q6P5R6 122 aaKnown RBP0.83□□□□□ -2.28
LTN1-206ENST00000486427 LCN15Q6UWW0 184 aa0.83□□□□□ -2.28
LTN1-206ENST00000486427 C12orf29Q8N999 325 aa0.83□□□□□ -2.28
LTN1-206ENST00000486427 OR13C4Q8NGS5 318 aa0.83□□□□□ -2.28
LTN1-206ENST00000486427 TMEM106AQ96A25 262 aa0.83□□□□□ -2.28
LTN1-206ENST00000486427 ODF3Q96PU9 254 aa0.83□□□□□ -2.28
LTN1-206ENST00000486427 MRPS26Q9BYN8 205 aaKnown RBP0.83□□□□□ -2.28
LTN1-206ENST00000486427 GUCA1BQ9UMX6 200 aa0.83□□□□□ -2.28
LTN1-206ENST00000486427 TOPBP1Q92547 1522 aa0.83□□□□□ -2.28
LTN1-206ENST00000486427 CACNA1BQ00975 2339 aa0.82□□□□□ -2.28
LTN1-206ENST00000486427 IGKV2D-26A0A0A0MRZ7 120 aa0.82□□□□□ -2.28
LTN1-206ENST00000486427 CTSDP07339 412 aaPredicted RBP0.82□□□□□ -2.28
LTN1-206ENST00000486427 HIST1H1TP22492 207 aaPredicted RBP0.82□□□□□ -2.28
LTN1-206ENST00000486427 SPANXN3Q5MJ09 141 aa0.82□□□□□ -2.28
LTN1-206ENST00000486427 LPCAT4Q643R3 524 aa0.82□□□□□ -2.28
LTN1-206ENST00000486427 Q6ZQT0 140 aa0.82□□□□□ -2.28
LTN1-206ENST00000486427 AAED1Q7RTV5 226 aa0.82□□□□□ -2.28
LTN1-206ENST00000486427 DEFB128Q7Z7B8 93 aa0.82□□□□□ -2.28
LTN1-206ENST00000486427 IQCF2Q8IXL9 164 aa0.82□□□□□ -2.28
LTN1-206ENST00000486427 MCFD2Q8NI22 146 aa0.82□□□□□ -2.28
LTN1-206ENST00000486427 AQP3Q92482 292 aa0.82□□□□□ -2.28
LTN1-206ENST00000486427 SCGB3A1Q96QR1 104 aa0.82□□□□□ -2.28
LTN1-206ENST00000486427 OR52E6Q96RD3 313 aa0.82□□□□□ -2.28
LTN1-206ENST00000486427 SERPINI1Q99574 410 aa0.82□□□□□ -2.28
LTN1-206ENST00000486427 DIDO1Q9BTC0 2240 aaKnown RBP0.82□□□□□ -2.28
LTN1-206ENST00000486427 IGKV1D-42A0A075B6H8 117 aa0.81□□□□□ -2.28
LTN1-206ENST00000486427 TGIF2-C20orf24A0A0A6YYL0 155 aa0.81□□□□□ -2.28
LTN1-206ENST00000486427 FUOMA2VDF0 154 aa0.81□□□□□ -2.28
LTN1-206ENST00000486427 HTR1AP08908 422 aa0.81□□□□□ -2.28
LTN1-206ENST00000486427 SPCS3P61009 180 aa0.81□□□□□ -2.28
LTN1-206ENST00000486427 SNRPD2P62316 118 aaKnown RBP0.81□□□□□ -2.28
LTN1-206ENST00000486427 HBA1P69905 142 aa0.81□□□□□ -2.28
LTN1-206ENST00000486427 HIST2H3PS2Q5TEC6 136 aa0.81□□□□□ -2.28
LTN1-206ENST00000486427 TEX36Q5VZQ5 186 aa0.81□□□□□ -2.28
LTN1-206ENST00000486427 C8orf74Q6P047 294 aa0.81□□□□□ -2.28
LTN1-206ENST00000486427 WFDC11Q8NEX6 87 aa0.81□□□□□ -2.28
LTN1-206ENST00000486427 OR4C6Q8NH72 309 aa0.81□□□□□ -2.28
LTN1-206ENST00000486427 TERB2Q8NHR7 220 aa0.81□□□□□ -2.28
LTN1-206ENST00000486427 TRABDQ9H4I3 376 aa0.81□□□□□ -2.28
LTN1-206ENST00000486427 FBXL12Q9NXK8 326 aa0.81□□□□□ -2.28
LTN1-206ENST00000486427 OR5AC2Q9NZP5 309 aa0.81□□□□□ -2.28
LTN1-206ENST00000486427 CKLFQ9UBR5 152 aa0.81□□□□□ -2.28
LTN1-206ENST00000486427 C22orf24Q9Y442 160 aa0.81□□□□□ -2.28
LTN1-206ENST00000486427 MTUS2Q5JR59 1369 aa0.81□□□□□ -2.28
LTN1-206ENST00000486427 WRNQ14191 1432 aaPredicted RBP eCLIP0.81□□□□□ -2.28
LTN1-206ENST00000486427 TECTAO75443 2155 aa0.8□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms