RNA–Protein interactions for RNA: ENST00000486227.5

HDAC6-228, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 4,718 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-228ENST00000486227 TECTAO75443 2155 aa9.23□□□□□ -0.93
HDAC6-228ENST00000486227 IGHV3OR16-10A0A075B7F0 116 aa9.23□□□□□ -0.93
HDAC6-228ENST00000486227 HGFACQ04756 655 aa9.23□□□□□ -0.93
HDAC6-228ENST00000486227 ZNF418Q8TF45 676 aaPredicted RBP9.23□□□□□ -0.93
HDAC6-228ENST00000486227 PLSCR4Q9NRQ2 329 aa9.23□□□□□ -0.93
HDAC6-228ENST00000486227 NOTCH2Q04721 2471 aa9.23□□□□□ -0.93
HDAC6-228ENST00000486227 C12orf54Q6X4T0 127 aa9.23□□□□□ -0.93
HDAC6-228ENST00000486227 TMEM186Q96B77 213 aa9.23□□□□□ -0.93
HDAC6-228ENST00000486227 CLEC5AQ9NY25 188 aa9.23□□□□□ -0.93
HDAC6-228ENST00000486227 KIF26AQ9ULI4 1882 aaPredicted RBP9.23□□□□□ -0.93
HDAC6-228ENST00000486227 PEAR1Q5VY43 1037 aaPredicted RBP9.23□□□□□ -0.93
HDAC6-228ENST00000486227 C7orf69Q9H7B7 122 aa9.23□□□□□ -0.93
HDAC6-228ENST00000486227 PLXNB3Q9ULL4 1909 aa9.23□□□□□ -0.93
HDAC6-228ENST00000486227 A6NDN8 102 aa9.22□□□□□ -0.93
HDAC6-228ENST00000486227 ISLRO14498 428 aa9.22□□□□□ -0.93
HDAC6-228ENST00000486227 OR4D5Q8NGN0 318 aa9.22□□□□□ -0.93
HDAC6-228ENST00000486227 LILRA1O75019 489 aa9.22□□□□□ -0.93
HDAC6-228ENST00000486227 OR4C13Q8NGP0 309 aa9.22□□□□□ -0.93
HDAC6-228ENST00000486227 PIEZO1Q92508 2521 aa9.22□□□□□ -0.93
HDAC6-228ENST00000486227 TRAV1-1A0A0B4J248 108 aa9.22□□□□□ -0.93
HDAC6-228ENST00000486227 PLAUP00749 431 aa9.22□□□□□ -0.93
HDAC6-228ENST00000486227 IGHV3-48P01763 117 aa9.22□□□□□ -0.93
HDAC6-228ENST00000486227 LINC00869P0C866 280 aa9.22□□□□□ -0.93
HDAC6-228ENST00000486227 CBLN1P23435 193 aa9.22□□□□□ -0.93
HDAC6-228ENST00000486227 MFAP2P55001 183 aa9.22□□□□□ -0.93
HDAC6-228ENST00000486227 ST6GALNAC3Q8NDV1 305 aa9.22□□□□□ -0.93
HDAC6-228ENST00000486227 PRSS3P2Q8NHM4 247 aa9.22□□□□□ -0.93
HDAC6-228ENST00000486227 SPSB4Q96A44 273 aa9.22□□□□□ -0.93
HDAC6-228ENST00000486227 C2orf16Q68DN1 1984 aa9.22□□□□□ -0.93
HDAC6-228ENST00000486227 LOC102724200A0A096LPH7 203 aaPredicted RBP9.22□□□□□ -0.93
HDAC6-228ENST00000486227 KBTBD11-OT1A0A1B0GTJ5 212 aa9.22□□□□□ -0.93
HDAC6-228ENST00000486227 DLEU1O43261 78 aa9.22□□□□□ -0.93
HDAC6-228ENST00000486227 OR5AL1P0C617 328 aa9.22□□□□□ -0.93
HDAC6-228ENST00000486227 BPIFA4PQ86YQ2 179 aa9.22□□□□□ -0.93
HDAC6-228ENST00000486227 FCER1GP30273 86 aa9.21□□□□□ -0.93
HDAC6-228ENST00000486227 RND2P52198 227 aa9.21□□□□□ -0.93
HDAC6-228ENST00000486227 ZNF497Q6ZNH5 498 aa9.21□□□□□ -0.93
HDAC6-228ENST00000486227 FOXL2NBQ6ZUU3 175 aa9.21□□□□□ -0.93
HDAC6-228ENST00000486227 CENPVQ7Z7K6 275 aaPredicted RBP9.21□□□□□ -0.93
HDAC6-228ENST00000486227 ZNF525Q8N782 197 aa9.21□□□□□ -0.93
HDAC6-228ENST00000486227 NHLRC2Q8NBF2 726 aa9.21□□□□□ -0.93
HDAC6-228ENST00000486227 ZNF581Q9P0T4 197 aa9.21□□□□□ -0.93
HDAC6-228ENST00000486227 CREBBPQ92793 2442 aa9.21□□□□□ -0.93
HDAC6-228ENST00000486227 REG1AP05451 166 aa9.21□□□□□ -0.94
HDAC6-228ENST00000486227 HIST1H1EP10412 219 aaKnown RBP9.21□□□□□ -0.94
HDAC6-228ENST00000486227 QRFPP83859 136 aa9.21□□□□□ -0.94
HDAC6-228ENST00000486227 ID3Q02535 119 aa9.21□□□□□ -0.94
HDAC6-228ENST00000486227 MBD3L1Q8WWY6 194 aa9.21□□□□□ -0.94
HDAC6-228ENST00000486227 ACACBO00763 2458 aa9.21□□□□□ -0.94
HDAC6-228ENST00000486227 RPL24P83731 157 aaKnown RBP9.21□□□□□ -0.94
HDAC6-228ENST00000486227 TMEM42Q69YG0 159 aa9.21□□□□□ -0.94
HDAC6-228ENST00000486227 C5orf24Q7Z6I8 188 aa9.21□□□□□ -0.94
HDAC6-228ENST00000486227 HSPB8Q9UJY1 196 aa9.21□□□□□ -0.94
HDAC6-228ENST00000486227 LTBP2Q14767 1821 aa9.21□□□□□ -0.94
HDAC6-228ENST00000486227 CORTO00230 105 aa9.2□□□□□ -0.94
HDAC6-228ENST00000486227 BMPR1BO00238 502 aa9.2□□□□□ -0.94
HDAC6-228ENST00000486227 CCL3L1P16619 93 aa9.2□□□□□ -0.94
HDAC6-228ENST00000486227 C1orf194Q5T5A4 169 aa9.2□□□□□ -0.94
HDAC6-228ENST00000486227 WFDC3Q8IUB2 231 aa9.2□□□□□ -0.94
HDAC6-228ENST00000486227 TRAV9-1A0A075B6T8 112 aa9.2□□□□□ -0.94
HDAC6-228ENST00000486227 HYPMO75409 117 aa9.2□□□□□ -0.94
HDAC6-228ENST00000486227 LINC00614P0C842 121 aa9.2□□□□□ -0.94
HDAC6-228ENST00000486227 STXBP6Q8NFX7 210 aa9.2□□□□□ -0.94
HDAC6-228ENST00000486227 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.2□□□□□ -0.941e-12■■■□□ 15.5
HDAC6-228ENST00000486227 DPRXA6NFQ7 191 aa9.2□□□□□ -0.94
HDAC6-228ENST00000486227 SRIP30626 198 aa9.2□□□□□ -0.94
HDAC6-228ENST00000486227 FAM90A1Q86YD7 464 aa9.2□□□□□ -0.94
HDAC6-228ENST00000486227 PAXXQ9BUH6 204 aa9.2□□□□□ -0.94
HDAC6-228ENST00000486227 DPM3Q9P2X0 92 aa9.2□□□□□ -0.94
HDAC6-228ENST00000486227 IFITM10A6NMD0 228 aa9.2□□□□□ -0.94
HDAC6-228ENST00000486227 IGHG3P01860 377 aa9.2□□□□□ -0.94
HDAC6-228ENST00000486227 EGR1P18146 543 aa9.2□□□□□ -0.94
HDAC6-228ENST00000486227 ID1P41134 155 aa9.2□□□□□ -0.94
HDAC6-228ENST00000486227 ZNF664Q8N3J9 261 aa9.2□□□□□ -0.94
HDAC6-228ENST00000486227 KIAA1671Q9BY89 1806 aa9.2□□□□□ -0.94
HDAC6-228ENST00000486227 DOCK10Q96BY6 2186 aa9.2□□□□□ -0.94
HDAC6-228ENST00000486227 SHANK1Q9Y566 2161 aa9.2□□□□□ -0.94
HDAC6-228ENST00000486227 AMY1AP04745 511 aa9.19□□□□□ -0.94
HDAC6-228ENST00000486227 PPOXP50336 477 aa9.19□□□□□ -0.94
HDAC6-228ENST00000486227 IBA57Q5T440 356 aaKnown RBP9.19□□□□□ -0.94
HDAC6-228ENST00000486227 RBPMS2Q6ZRY4 209 aaKnown RBP9.19□□□□□ -0.94
HDAC6-228ENST00000486227 OR4A5Q8NH83 315 aa9.19□□□□□ -0.94
HDAC6-228ENST00000486227 HOXA4Q00056 320 aaPredicted RBP9.19□□□□□ -0.94
HDAC6-228ENST00000486227 A8MWP6 167 aa9.19□□□□□ -0.94
HDAC6-228ENST00000486227 LYNX1G3V0Z9 82 aa9.19□□□□□ -0.94
HDAC6-228ENST00000486227 PSPNO60542 156 aa9.19□□□□□ -0.94
HDAC6-228ENST00000486227 THBDP07204 575 aa9.19□□□□□ -0.94
HDAC6-228ENST00000486227 ARL14EPLP0DKL9 152 aa9.19□□□□□ -0.94
HDAC6-228ENST00000486227 LYNX1P0DP58 116 aa9.19□□□□□ -0.94
HDAC6-228ENST00000486227 GZMBP10144 247 aa9.19□□□□□ -0.94
HDAC6-228ENST00000486227 SLC25A34Q6PIV7 304 aa9.19□□□□□ -0.94
HDAC6-228ENST00000486227 GBGT1Q8N5D6 347 aa9.19□□□□□ -0.94
HDAC6-228ENST00000486227 LRRK1Q38SD2 2015 aa9.19□□□□□ -0.94
HDAC6-228ENST00000486227 PTPRQQ9UMZ3 2332 aa9.19□□□□□ -0.94
HDAC6-228ENST00000486227 CACNA1AO00555 2505 aa9.19□□□□□ -0.94
HDAC6-228ENST00000486227 GAGE10A6NGK3 116 aa9.19□□□□□ -0.94
HDAC6-228ENST00000486227 C1QTNF9BB2RNN3 333 aa9.19□□□□□ -0.94
HDAC6-228ENST00000486227 TM4SF5O14894 197 aa9.19□□□□□ -0.94
HDAC6-228ENST00000486227 C1QTNF9P0C862 333 aa9.19□□□□□ -0.94
HDAC6-228ENST00000486227 SELLP14151 372 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms