RNA–Protein interactions for RNA: ENST00000485983.6

SRGAP3-207, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best)

Gene SRGAP3, Length 5,677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-207ENST00000485983 RAMP1O60894 148 aa8.89□□□□□ -0.99
SRGAP3-207ENST00000485983 CCL3L1P16619 93 aa8.89□□□□□ -0.99
SRGAP3-207ENST00000485983 PRSS53Q2L4Q9 553 aa8.89□□□□□ -0.99
SRGAP3-207ENST00000485983 FAM71F2Q6NXP2 309 aa8.89□□□□□ -0.99
SRGAP3-207ENST00000485983 MRPL14Q6P1L8 145 aaKnown RBP8.89□□□□□ -0.99
SRGAP3-207ENST00000485983 SFRP2Q96HF1 295 aa8.89□□□□□ -0.99
SRGAP3-207ENST00000485983 TRGC2P03986 189 aa8.89□□□□□ -0.99
SRGAP3-207ENST00000485983 KLK2P20151 261 aa8.89□□□□□ -0.99
SRGAP3-207ENST00000485983 EFNA4P52798 201 aa8.89□□□□□ -0.99
SRGAP3-207ENST00000485983 RHOGP84095 191 aa8.89□□□□□ -0.99
SRGAP3-207ENST00000485983 ZNF600Q6ZNG1 722 aa8.89□□□□□ -0.99
SRGAP3-207ENST00000485983 UQCR10Q9UDW1 63 aa8.89□□□□□ -0.99
SRGAP3-207ENST00000485983 FOCADQ5VW36 1801 aa8.89□□□□□ -0.99
SRGAP3-207ENST00000485983 A0A0G2JMM0 328 aa8.89□□□□□ -0.99
SRGAP3-207ENST00000485983 A0A1W2PPB8 328 aa8.89□□□□□ -0.99
SRGAP3-207ENST00000485983 A0A1W2PRS3 328 aa8.89□□□□□ -0.99
SRGAP3-207ENST00000485983 KIR3DP1A8MWS1 328 aa8.89□□□□□ -0.99
SRGAP3-207ENST00000485983 Q6AWC8 147 aa8.89□□□□□ -0.99
SRGAP3-207ENST00000485983 ASCL2Q99929 193 aa8.89□□□□□ -0.99
SRGAP3-207ENST00000485983 QSER1Q2KHR3 1735 aa8.89□□□□□ -0.99
SRGAP3-207ENST00000485983 A0A1B0GUT8 65 aa8.89□□□□□ -0.99
SRGAP3-207ENST00000485983 PSCAO43653 123 aa8.89□□□□□ -0.99
SRGAP3-207ENST00000485983 FER1L6-AS1Q8NA97 138 aa8.89□□□□□ -0.99
SRGAP3-207ENST00000485983 FMC1Q96HJ9 113 aa8.89□□□□□ -0.99
SRGAP3-207ENST00000485983 ESPL1Q14674 2120 aa8.88□□□□□ -0.99
SRGAP3-207ENST00000485983 DLEC1Q9Y238 1755 aa8.88□□□□□ -0.99
SRGAP3-207ENST00000485983 TRGV11A0A075B6L2 103 aa8.88□□□□□ -0.99
SRGAP3-207ENST00000485983 B4DSR2 109 aa8.88□□□□□ -0.99
SRGAP3-207ENST00000485983 IGFBP2P18065 325 aa8.88□□□□□ -0.99
SRGAP3-207ENST00000485983 CD33P20138 364 aa8.88□□□□□ -0.99
SRGAP3-207ENST00000485983 EGR4Q05215 589 aa8.88□□□□□ -0.99
SRGAP3-207ENST00000485983 BEND2Q8NDZ0 799 aa8.88□□□□□ -0.99
SRGAP3-207ENST00000485983 OR1P1Q8NH06 330 aa8.88□□□□□ -0.99
SRGAP3-207ENST00000485983 GLMPQ8WWB7 406 aa8.88□□□□□ -0.99
SRGAP3-207ENST00000485983 REPIN1Q9BWE0 567 aaKnown RBP8.88□□□□□ -0.99
SRGAP3-207ENST00000485983 A0A087WX48 190 aa8.88□□□□□ -0.99
SRGAP3-207ENST00000485983 C18orf15Q96N68 181 aa8.88□□□□□ -0.99
SRGAP3-207ENST00000485983 CHCHD5Q9BSY4 110 aa8.88□□□□□ -0.99
SRGAP3-207ENST00000485983 AICDAQ9GZX7 198 aa8.88□□□□□ -0.99
SRGAP3-207ENST00000485983 VCX2Q9H322 139 aa8.88□□□□□ -0.99
SRGAP3-207ENST00000485983 DOCK3Q8IZD9 2030 aa8.88□□□□□ -0.99
SRGAP3-207ENST00000485983 KIAA1217Q5T5P2 1943 aa8.88□□□□□ -0.99
SRGAP3-207ENST00000485983 A0A1B0GW15 77 aa8.88□□□□□ -0.99
SRGAP3-207ENST00000485983 H0YL77 283 aa8.88□□□□□ -0.99
SRGAP3-207ENST00000485983 TSPAN13O95857 204 aa8.88□□□□□ -0.99
SRGAP3-207ENST00000485983 RND3P61587 244 aa8.88□□□□□ -0.99
SRGAP3-207ENST00000485983 MUC21Q5SSG8 566 aa8.88□□□□□ -0.99
SRGAP3-207ENST00000485983 PVRIGQ6DKI7 326 aa8.88□□□□□ -0.99
SRGAP3-207ENST00000485983 RARRES2Q99969 163 aa8.88□□□□□ -0.99
SRGAP3-207ENST00000485983 RBM38Q9H0Z9 239 aaKnown RBP8.88□□□□□ -0.99
SRGAP3-207ENST00000485983 FABP5P3A8MUU1 101 aa8.88□□□□□ -0.99
SRGAP3-207ENST00000485983 C17orf98A8MV24 154 aa8.88□□□□□ -0.99
SRGAP3-207ENST00000485983 CD300CQ08708 224 aa8.88□□□□□ -0.99
SRGAP3-207ENST00000485983 LINC01590Q5TEZ4 76 aa8.88□□□□□ -0.99
SRGAP3-207ENST00000485983 SLC25A38Q96DW6 304 aa8.88□□□□□ -0.99
SRGAP3-207ENST00000485983 FOXC2Q99958 501 aa8.88□□□□□ -0.99
SRGAP3-207ENST00000485983 SBF2Q86WG5 1849 aa8.87□□□□□ -0.99
SRGAP3-207ENST00000485983 GRIFINA4D1Z8 144 aa8.87□□□□□ -0.99
SRGAP3-207ENST00000485983 CD8AP01732 235 aa8.87□□□□□ -0.99
SRGAP3-207ENST00000485983 UMODP07911 640 aa8.87□□□□□ -0.99
SRGAP3-207ENST00000485983 GNLYP22749 145 aa8.87□□□□□ -0.99
SRGAP3-207ENST00000485983 IFI27P40305 119 aaPredicted RBP8.87□□□□□ -0.99
SRGAP3-207ENST00000485983 OR10J3Q5JRS4 329 aa8.87□□□□□ -0.99
SRGAP3-207ENST00000485983 NPDC1Q9NQX5 325 aaPredicted RBP8.87□□□□□ -0.99
SRGAP3-207ENST00000485983 MDC1Q14676 2089 aaKnown RBP8.87□□□□□ -0.99
SRGAP3-207ENST00000485983 TRAV21A0A0B4J279 112 aa8.87□□□□□ -0.99
SRGAP3-207ENST00000485983 OR9G9P0C7N8 305 aa8.87□□□□□ -0.99
SRGAP3-207ENST00000485983 LHX2P50458 406 aa8.87□□□□□ -0.99
SRGAP3-207ENST00000485983 ZP1P60852 638 aa8.87□□□□□ -0.99
SRGAP3-207ENST00000485983 NPCDR1Q9BY65 106 aa8.87□□□□□ -0.99
SRGAP3-207ENST00000485983 C1QTNF9BB2RNN3 333 aa8.87□□□□□ -0.99
SRGAP3-207ENST00000485983 LYNX1G3V0Z9 82 aa8.87□□□□□ -0.99
SRGAP3-207ENST00000485983 CELA3BP08861 270 aa8.87□□□□□ -0.99
SRGAP3-207ENST00000485983 STAG3L3P0CL85 134 aa8.87□□□□□ -0.99
SRGAP3-207ENST00000485983 LYNX1P0DP58 116 aa8.87□□□□□ -0.99
SRGAP3-207ENST00000485983 ZNF585BQ52M93 769 aa8.87□□□□□ -0.99
SRGAP3-207ENST00000485983 TTC9CQ8N5M4 171 aa8.87□□□□□ -0.99
SRGAP3-207ENST00000485983 PRADC1Q9BSG0 188 aa8.87□□□□□ -0.99
SRGAP3-207ENST00000485983 TRAF4Q9BUZ4 470 aaPredicted RBP8.87□□□□□ -0.99
SRGAP3-207ENST00000485983 ST20Q9HBF5 79 aa8.87□□□□□ -0.99
SRGAP3-207ENST00000485983 ERVK11-1P61568 191 aa8.87□□□□□ -0.99
SRGAP3-207ENST00000485983 TDRD6O60522 2096 aaKnown RBP8.87□□□□□ -0.99
SRGAP3-207ENST00000485983 PIN1P1O15428 100 aa8.87□□□□□ -0.99
SRGAP3-207ENST00000485983 CGAP01215 116 aa8.87□□□□□ -0.99
SRGAP3-207ENST00000485983 CXCL2P19875 107 aa8.87□□□□□ -0.99
SRGAP3-207ENST00000485983 NEUROG1Q92886 237 aa8.87□□□□□ -0.99
SRGAP3-207ENST00000485983 TMEM50AO95807 157 aa8.86□□□□□ -0.99
SRGAP3-207ENST00000485983 IL18BPO95998 194 aa8.86□□□□□ -0.99
SRGAP3-207ENST00000485983 F12P00748 615 aaPredicted RBP8.86□□□□□ -0.99
SRGAP3-207ENST00000485983 SAA1P0DJI8 122 aaPredicted RBP8.86□□□□□ -0.99
SRGAP3-207ENST00000485983 FOXA3P55318 350 aaPredicted RBP8.86□□□□□ -0.99
SRGAP3-207ENST00000485983 Q9H3A6 140 aa8.86□□□□□ -0.99
SRGAP3-207ENST00000485983 RNF114Q9Y508 228 aa8.86□□□□□ -0.99
SRGAP3-207ENST00000485983 CXorf65A6NEN9 183 aa8.86□□□□□ -0.99
SRGAP3-207ENST00000485983 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.86□□□□□ -0.99
SRGAP3-207ENST00000485983 ZNF250P15622 560 aa8.86□□□□□ -0.99
SRGAP3-207ENST00000485983 PAX8Q06710 450 aa8.86□□□□□ -0.99
SRGAP3-207ENST00000485983 ZNF506Q5JVG8 444 aa8.86□□□□□ -0.99
SRGAP3-207ENST00000485983 ABCA4P78363 2273 aa8.86□□□□□ -0.99
SRGAP3-207ENST00000485983 SPTBP11277 2137 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms