RNA–Protein interactions for RNA: ENST00000484822.1

RXRA-203, Transcript of retinoid X receptor alpha, humanhuman

TSL 2

Gene RXRA, Length 5,215 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-203ENST00000484822 STAG3L3P0CL85 134 aa12.78□□□□□ -0.36
RXRA-203ENST00000484822 GATA2P23769 480 aaPredicted RBP12.78□□□□□ -0.36
RXRA-203ENST00000484822 MFAP4P55083 255 aa12.78□□□□□ -0.36
RXRA-203ENST00000484822 SYT8Q8NBV8 401 aa12.78□□□□□ -0.36
RXRA-203ENST00000484822 KIR2DL4Q99706 377 aa12.78□□□□□ -0.36
RXRA-203ENST00000484822 C17orf98A8MV24 154 aa12.77□□□□□ -0.36
RXRA-203ENST00000484822 HIGD1CA8MV81 97 aa12.77□□□□□ -0.36
RXRA-203ENST00000484822 NUTF2P61970 127 aaKnown RBP12.77□□□□□ -0.36
RXRA-203ENST00000484822 PSG9Q00887 426 aa12.77□□□□□ -0.36
RXRA-203ENST00000484822 LRTM2Q8N967 370 aa12.77□□□□□ -0.36
RXRA-203ENST00000484822 CHODLQ9H9P2 273 aa12.77□□□□□ -0.36
RXRA-203ENST00000484822 TRAV9-2A0A087WT02 112 aa12.77□□□□□ -0.36
RXRA-203ENST00000484822 SMAGPQ0VAQ4 97 aa12.77□□□□□ -0.36
RXRA-203ENST00000484822 PPP1R32Q7Z5V6 425 aa12.77□□□□□ -0.36
RXRA-203ENST00000484822 FOXH1O75593 365 aa12.77□□□□□ -0.37
RXRA-203ENST00000484822 DNAL4O96015 105 aa12.77□□□□□ -0.37
RXRA-203ENST00000484822 PTGDSP41222 190 aa12.77□□□□□ -0.37
RXRA-203ENST00000484822 PYY3Q5JQD4 70 aa12.77□□□□□ -0.37
RXRA-203ENST00000484822 RIPPLY2Q5TAB7 128 aa12.77□□□□□ -0.37
RXRA-203ENST00000484822 MIR17HGQ75NE6 70 aa12.77□□□□□ -0.37
RXRA-203ENST00000484822 SRXN1Q9BYN0 137 aa12.77□□□□□ -0.37
RXRA-203ENST00000484822 HEATR5BQ9P2D3 2071 aa12.77□□□□□ -0.37
RXRA-203ENST00000484822 IGHV3OR16-13A0A075B7E8 117 aa12.77□□□□□ -0.37
RXRA-203ENST00000484822 IGHV3-74A0A0B4J1X5 117 aa12.77□□□□□ -0.37
RXRA-203ENST00000484822 DLEU1O43261 78 aa12.77□□□□□ -0.37
RXRA-203ENST00000484822 NAPSAO96009 420 aa12.77□□□□□ -0.37
RXRA-203ENST00000484822 IGHMP01871 453 aa12.77□□□□□ -0.37
RXRA-203ENST00000484822 EBLN2Q6P2I7 272 aa12.77□□□□□ -0.37
RXRA-203ENST00000484822 KLF14Q8TD94 323 aaPredicted RBP12.77□□□□□ -0.37
RXRA-203ENST00000484822 LINC00271P0C7V0 271 aa12.76□□□□□ -0.37
RXRA-203ENST00000484822 IZUMO1RA6ND01 250 aa12.76□□□□□ -0.37
RXRA-203ENST00000484822 LOC390937A0A1W2PQ73 354 aa12.76□□□□□ -0.37
RXRA-203ENST00000484822 CD5P06127 495 aa12.76□□□□□ -0.37
RXRA-203ENST00000484822 UNQ5815/PRO19632Q6UWF5 114 aa12.76□□□□□ -0.37
RXRA-203ENST00000484822 TRAV9-1A0A075B6T8 112 aa12.76□□□□□ -0.37
RXRA-203ENST00000484822 C12orf77C9JDV5 145 aa12.76□□□□□ -0.37
RXRA-203ENST00000484822 GPX1P07203 203 aa12.76□□□□□ -0.37
RXRA-203ENST00000484822 REG4Q9BYZ8 158 aa12.76□□□□□ -0.37
RXRA-203ENST00000484822 ZNF257Q9Y2Q1 563 aa12.76□□□□□ -0.37
RXRA-203ENST00000484822 C9orf172C9J069 976 aa12.75□□□□□ -0.37
RXRA-203ENST00000484822 WNT9BO14905 357 aa12.75□□□□□ -0.37
RXRA-203ENST00000484822 RPP21Q9H633 154 aaKnown RBP12.75□□□□□ -0.37
RXRA-203ENST00000484822 GEMIN7Q9H840 131 aaKnown RBP12.75□□□□□ -0.37
RXRA-203ENST00000484822 hCG_38984A0A1B0GV85 526 aa12.75□□□□□ -0.37
RXRA-203ENST00000484822 C1QL4Q86Z23 238 aa12.75□□□□□ -0.37
RXRA-203ENST00000484822 ABCA7Q8IZY2 2146 aa12.75□□□□□ -0.37
RXRA-203ENST00000484822 TRAV8-2A0A0B4J237 113 aa12.75□□□□□ -0.37
RXRA-203ENST00000484822 TMEM95Q3KNT9 176 aa12.75□□□□□ -0.37
RXRA-203ENST00000484822 WFDC1Q9HC57 220 aa12.75□□□□□ -0.37
RXRA-203ENST00000484822 PPP1R17O96001 155 aa12.75□□□□□ -0.37
RXRA-203ENST00000484822 ZNF56Q15929 161 aa12.75□□□□□ -0.37
RXRA-203ENST00000484822 WDR82Q6UXN9 313 aa12.75□□□□□ -0.37
RXRA-203ENST00000484822 MBD3L1Q8WWY6 194 aa12.75□□□□□ -0.37
RXRA-203ENST00000484822 ZNRF1Q8ND25 227 aa12.75□□□□□ -0.37
RXRA-203ENST00000484822 MRAP2Q96G30 205 aa12.75□□□□□ -0.37
RXRA-203ENST00000484822 SIGMAR1Q99720 223 aa12.75□□□□□ -0.37
RXRA-203ENST00000484822 TMEM50AO95807 157 aa12.74□□□□□ -0.37
RXRA-203ENST00000484822 PF4V1P10720 104 aa12.74□□□□□ -0.37
RXRA-203ENST00000484822 CDCP2Q5VXM1 449 aa12.74□□□□□ -0.37
RXRA-203ENST00000484822 OR2K2Q8NGT1 345 aa12.74□□□□□ -0.37
RXRA-203ENST00000484822 IFI27L2Q9H2X8 130 aa12.74□□□□□ -0.37
RXRA-203ENST00000484822 M0R381 172 aa12.74□□□□□ -0.37
RXRA-203ENST00000484822 SIP14410 1827 aa12.74□□□□□ -0.37
RXRA-203ENST00000484822 TMEM8BA6NDV4 472 aa12.74□□□□□ -0.37
RXRA-203ENST00000484822 B9A039 149 aa12.74□□□□□ -0.37
RXRA-203ENST00000484822 BEND2Q8NDZ0 799 aa12.74□□□□□ -0.37
RXRA-203ENST00000484822 OR5P3Q8WZ94 311 aa12.74□□□□□ -0.37
RXRA-203ENST00000484822 IGKV3OR2-268A0A0C4DH90 116 aa12.74□□□□□ -0.37
RXRA-203ENST00000484822 ATP5LO75964 103 aa12.74□□□□□ -0.37
RXRA-203ENST00000484822 NDUFA3O95167 84 aa12.74□□□□□ -0.37
RXRA-203ENST00000484822 CD55P08174 381 aa12.74□□□□□ -0.37
RXRA-203ENST00000484822 IGFBP3P17936 291 aaPredicted RBP12.74□□□□□ -0.37
RXRA-203ENST00000484822 IGHV3OR16-12A0A075B7B8 117 aa12.73□□□□□ -0.37
RXRA-203ENST00000484822 UBE2L6O14933 153 aa12.73□□□□□ -0.37
RXRA-203ENST00000484822 C10orf128Q5T292 105 aa12.73□□□□□ -0.37
RXRA-203ENST00000484822 SCGB3A1Q96QR1 104 aa12.73□□□□□ -0.37
RXRA-203ENST00000484822 NAA38Q9BRA0 125 aaKnown RBP12.73□□□□□ -0.37
RXRA-203ENST00000484822 AICDAQ9GZX7 198 aa12.73□□□□□ -0.37
RXRA-203ENST00000484822 ARHGEF17Q96PE2 2063 aaPredicted RBP12.73□□□□□ -0.37
RXRA-203ENST00000484822 NPIPB4C9JG80 1138 aa12.73□□□□□ -0.37
RXRA-203ENST00000484822 OR13C6PQ8NH95 151 aa12.73□□□□□ -0.37
RXRA-203ENST00000484822 NPIPB13A6NJU9 1138 aa12.73□□□□□ -0.37
RXRA-203ENST00000484822 TNFSF13O75888 250 aa12.73□□□□□ -0.37
RXRA-203ENST00000484822 GP6Q9HCN6 339 aa12.73□□□□□ -0.37
RXRA-203ENST00000484822 ZSWIM8A7E2V4 1837 aa12.73□□□□□ -0.37
RXRA-203ENST00000484822 DOCK6Q96HP0 2047 aa12.73□□□□□ -0.37
RXRA-203ENST00000484822 TRAV30A0A087WSZ9 112 aa12.73□□□□□ -0.37
RXRA-203ENST00000484822 ANAPC13Q9BS18 74 aa12.73□□□□□ -0.37
RXRA-203ENST00000484822 TRBV24-1A0A075B6N3 115 aa12.72□□□□□ -0.37
RXRA-203ENST00000484822 A0A1W2PS18 150 aa12.72□□□□□ -0.37
RXRA-203ENST00000484822 PRR32B1ATL7 298 aa12.72□□□□□ -0.37
RXRA-203ENST00000484822 OCC1Q8TAD7 63 aa12.72□□□□□ -0.37
RXRA-203ENST00000484822 C18orf12Q96KH6 178 aa12.72□□□□□ -0.37
RXRA-203ENST00000484822 S4R3C0 116 aa12.72□□□□□ -0.37
RXRA-203ENST00000484822 GREB1Q4ZG55 1949 aa12.72□□□□□ -0.37
RXRA-203ENST00000484822 PSMB11A5LHX3 300 aa12.72□□□□□ -0.37
RXRA-203ENST00000484822 ORMDL3Q8N138 153 aa12.72□□□□□ -0.37
RXRA-203ENST00000484822 OR52E5Q8NH55 327 aa12.72□□□□□ -0.37
RXRA-203ENST00000484822 NEUROG3Q9Y4Z2 214 aa12.72□□□□□ -0.37
RXRA-203ENST00000484822 ANK1P16157 1881 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms